Oncorhynchus masou masou (cherry salmon): 135510812
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Entry
135510812 CDS
T10723
Symbol
rrp12
Name
(RefSeq) LOW QUALITY PROTEIN: RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
omm03009
]
135510812 (rrp12)
Ribosome biogenesis [BR:
omm03009
]
Eukaryotic type
90S particles
Other 90S particles
135510812 (rrp12)
Pre-60S particles
Other pre-60S particles
135510812 (rrp12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
135510812
NCBI-ProteinID:
XP_064788135
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All DBs
Position
23:39368104..39393918
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AA seq
1292 aa
AA seq
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MVKSGKLKSGAASKLKRWKKGHSSDSNPQTSRFRQAAKSRFFSRPSEKSDLTVDALKLHN
ELQAGTLERGAGDQGDACMEETAEQALSERSAGTFLSGLSDCSNLTFRKVQRFWESNSAA
HKEICAVLAAVTEVIRSQGGKETETEYFAALMTTLEAVDSGESLAAVAYLLNLVMKRVPA
PVLICKFSDTAKALMDVMSTLASSESASALRWILSCLSTLLRKQDVTVWSYPSTLQTYHG
LLSFTVHSKPKIRKAAQHGVCSILRGSDLLFTDNAPTHHPAAAMAAKFCIKEIEQAGGSK
EDTTTLHVLGLLKDLMVTFPLNAVKSCCETLLRVMTLSHVLVTACAMQAFHKLFSGKPNP
VTLSAELNAQIITALYDYLPSENDLQPLLAWLAVMEKAHVHLAGVQSSLSLGHLPRLFST
AMSCLLSPHPQVVSAATNTLKTLLSECVAPRMEEIGPVSPTASSGNPSYVCKMFRIVEEG
LSYRFHASWPFVLQLLGCFYRAAGKQTHPVMTKSLQSLADLRSTPRFPFCGELDLAVGGA
VESMGPEVLLTAVPLNITGLEDNLEFPRSWLIPVIRDHVKNTQLAYYTSYLLPLAATLRQ
RAEELEKAGQKLEAKVYKTLQLQIWTMLPGFCXGPLDLLVSFKGVARALGMAINERPDLR
LTICQAIRTLITKSCNTEEEKAEVGRFAKNFLPILFNVFSQQPAPGDIGPYRMAVLDTIK
VYLTVTDPQMVCTFLSKATERLNSPDSTEFIRLSVMDLMVAMAPCVDEVTMSQTFELIRP
YLENKEPHMQKKAYRXLEEMCGGEREECRSFVLSHLETLKHVLLGTLKNASSPAKRPRLK
CLIHIVKQLSDEHRDFITALLPEVIICTKEVSVGARKNAYTLLVEIGNAFIRFCGDAKEA
LEQYLLLVYVGLTGSVTMITCTVLALTRLVFEYKDSIDMGSMEHLLHNVCLLLTSRTREI
VKAALSFVKVILFVMDPKTLAGHVTVMMEGVGNIKDDVRRHFRTKLKNIFTKFIRKFGFE
LVKSKLPAEHHKVLVNIRKAEARTKRSRLAEEDHDDSDSGDDKPRARGASIEEILAESDS
DMSDDERPKGAKTQKKPTKQKGRAWLKEGQGDEPLNFLDPTVSQRVLATNPDTKKRAKVQ
HNFKVTPDGRLIIKEDNDEGDKTKDDDEGEMKDILEEAGVKSIKTKRRTFRDGHYDDDME
IEPQLKYKAGGSGIHRPLGGSRDLGGDYKAKKGKGDVKRKGKVDPYAYIPLRKAQLNRRK
KAKMQGQFKGMVRGAQKGAQSGKRMQRNKRRA
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaatctggaaaattaaaatctggggccgcatcgaaactgaagcgatggaaaaag
ggacacagcagcgactcgaacccccagacgagccgattcagacaggctgccaaaagccgt
ttcttcagccgcccctcggagaagagtgacctgacagttgatgcactcaagctgcacaat
gagctgcaggcaggaaccctggagaggggtgcgggtgaccagggagatgcctgtatggag
gagacggcagagcaggccctttcagagaggagcgcagggaccttcctcagcgggttgtcg
gactgctctaacctcaccttcagaaaggtgcagcgcttctgggagtccaactcagctgcc
cataaagagatatgtgcagtgctggctgcggtgactgaggtgattcgatctcagggaggg
aaggagacggaaacagagtactttgcagctctgatgaccaccctggaggcagtggattca
ggggagtctctggctgctgtagcctacctcctcaacctggttatgaaacgggttcctgca
ccagtgttgatttgtaagttctctgacacggccaaagctctgatggacgtcatgtccacc
ctggccagctcagagtccgcctccgcactcagatggatcctgtcgtgcctctccactctt
ttgcggaagcaggatgttacagtgtggagttacccgtctactctgcagacataccacggt
ctactcagcttcactgtccacagcaagcccaagatccgtaaagcagcgcagcatggtgtg
tgttccatcctgagaggcagtgacttactgtttacagacaacgccccgacccaccaccct
gctgccgcgatggccgccaagttctgcatcaaagagattgaacaggcaggaggcagtaag
gaggacaccaccaccctgcatgtcctgggtctcctgaaggacctcatggtcaccttccct
ctcaatgccgtcaagtcctgctgtgagactctgctcagggtgatgaccctcagccacgtg
ttggtgacagcatgtgccatgcaggccttccataagctgttcagtgggaaacccaaccct
gttaccctgtctgctgaactcaatgctcagatcatcacggccctgtatgactacctgccc
agtgagaatgacttgcagcctctactagcctggctggctgtaatggagaaagcccacgtt
cacctggccggtgttcagtcatctctaagtctgggtcatctccctcgtctcttctccaca
gccatgtcctgcctcctgtcacctcacccacaggtcgtctctgctgccaccaatacactc
aagactctgctgtcggagtgtgtggctcctcgcatggaggagattggccccgtcagcccc
accgcttcctctggaaacccttcctacgtctgcaagatgttccgtatcgtggaggagggt
ctgtcgtatcgtttccacgcctcctggccgtttgttctgcagttgctgggctgcttctac
agagcagcagggaaacaaacgcacccggtcatgaccaagtctctccagtctctagcggac
ctgcgctccaccccccggttcccgttctgtggtgagctggacctggctgtaggtggcgct
gtagagagcatgggacctgaagtactgctgaccgctgtaccgctcaacatcactggactg
gaagacaatctggagttccctcgtagttggttgatccctgtcatacgggatcatgttaag
aacacgcaactggcttactacacatcatatctcctgccgcttgctgccacgctccgacag
agagctgaggagttggagaaggcaggacagaaactggaggctaaagtctacaagacactc
cagctgcagatctggaccatgctgccagggttctgtntggggcccttggacctgctggtg
tcgtttaaaggtgtagcaagggcactgggcatggccatcaacgaacggcctgacctacga
ctgaccatctgccaggccatacgcacactcatcaccaagagctgtaacaccgaagaggag
aaggcggaggtggggcgttttgccaagaacttcctgcccatcctgttcaacgtgttcagc
cagcagcctgctcctggagacattggcccctacaggatggctgttctagacaccattaaa
gtctacctgactgtcacagacccacagatggtgtgtaccttcctatcgaaagctacagaa
agactcaacagcccagacagcactgagttcatacggttgtctgtaatggacctgatggtt
gccatggcaccctgtgtagatgaggtcacaatgagtcagacctttgagctgattaggcca
tacctggagaataaggagccacacatgcagaagaaggcataccgcngtttggaggagatg
tgtggtggagagagggaggagtgtagatctttcgttctctctcacctagagacgctcaaa
cacgttctgctggggacactgaagaatgcttcatctcccgccaagaggcccagactaaag
tgtcttatccacattgtgaaacagctgagtgatgaacacagagacttcatcactgccctg
ctaccagaggtgatcatatgtactaaggaggtgtcagtgggagctcgtaagaacgcctac
actctactggtggagataggaaacgcttttatcaggttctgtggagatgccaaagaagcc
ttggagcagtacctactgttggtctacgtggggctgaccggctcggtcacgatgatcaca
tgtacagtcctggctctcaccagactggtctttgagtacaaagactctatagacatggga
tcgatggagcacctcctacacaacgtgtgcctgctgctgacgtctcggaccagggagatt
gtgaaagcagcgctcagcttcgtcaaggtcatcctcttcgtcatggaccccaagacactg
gctggacacgtcactgtgatgatggagggtgttgggaacatcaaggatgacgttagaaga
cacttcaggacgaaactgaaaaacattttcaccaagttcatcaggaagtttgggtttgag
ttggtgaaaagcaagctgcctgcggagcatcataaggtgttggtgaacatccgtaaggct
gaggccagaaccaagagatcaagactggcggaagaagaccacgacgactcagacagcggg
gacgacaagccaagagccaggggagcgagtattgaggagatcttggccgagtctgactct
gatatgtcagatgacgaaaggcctaagggcgctaagacccagaagaagcccacaaagcag
aaggggcgggcctggctgaaggagggacagggagatgaaccactcaacttcctggatccc
actgtctcccagagggtcttggccaccaacccagacacgaagaagagggcaaaagttcag
cacaacttcaaggtcacgccagacggaagactcatcatcaaagaggacaatgacgaggga
gacaagactaaagatgatgatgagggagagatgaaagacattctggaggaggctggagtc
aagagtataaagactaagaggaggacattccgggatggtcattacgatgatgacatggag
attgaaccccagctgaaatacaaagctggaggctcggggatccacagacctctgggtggg
agcagagacctggggggagactacaaggccaagaagggtaaaggagatgtgaagaggaaa
ggaaaggttgatccatatgcctacatccctctgaggaaagcacagctgaaccgcaggaag
aaagcaaagatgcagggacagtttaaaggcatggtgagaggggcccagaagggagcgcag
tctgggaagaggatgcaaaggaacaagaggagggcctga
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