Oncorhynchus masou masou (cherry salmon): 135510817
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Entry
135510817 CDS
T10723
Symbol
mlh1
Name
(RefSeq) LOW QUALITY PROTEIN: DNA mismatch repair protein Mlh1
KO
K08734
DNA mismatch repair protein MLH1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03430
Mismatch repair
omm03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
135510817 (mlh1)
03460 Fanconi anemia pathway
135510817 (mlh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
omm03400
]
135510817 (mlh1)
DNA repair and recombination proteins [BR:
omm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
135510817 (mlh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
135510817
NCBI-ProteinID:
XP_064788141
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Position
23:complement(40351693..40369796)
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AA seq
725 aa
AA seq
DB search
MSGVIRRLDETVVNRIAAGEVIQRPANAIKELLENCLDAKSTNIQVTVKEGGLKLIQIQD
NGTGIRKEDMEIVCERFTTSKLQTFEDLNAISTYGFRGEALASISHVAHVTITTKTADAK
CAYRATYCDGKLKTQPKPCAGNQGTQITAEDLFYNVSTRRKALKSPSEEYSRIVEVVSRY
AIHNSGKSFAVKKQGETMADVRTLPNASILDNIRVVFGNTVSRELIEVGCEDQKLAYKLK
GHISNANYSVKKCILILFINHRLVESSALKKAIETVYAAYLPKNSHPFLYLSLEIAPHNI
DVNVHPTKHEVHFLHEDCIIESVQKQIESKLLGSNSSRTYFTQTLLPGLSVSTSEGKSSS
NSTGDSERVYXHQMVRTDSRAQKLDAFLQPASKLAPTPAANPNGQSRGEPVTTNGIEEMD
NAEILEEQAPGATEDGEGTSRNTPADLPRKRPRAGQDEEQEDLTAAATTRRRAIKLSSVK
ELRDDIAEHAHKGLQEMLQNHSFVGCVNPQWTLIQHHTKLYLLNTTKLSRELFYQILIYD
FGNFGILRLSEPAPLYDLAMLALDSEESGWSEEDGPKEGLAQYIVDFLKKKSEMLEDYFS
MEIDQEGNLTGLPLLLDKYTPPMEGLPMFILRLATEVNWDNEKDCFRDFSKECSQFYSIR
KQYVLELEPGEEEQGAELNSWRWKVEHLLFKSFRSLFSPPKHFSEDGSVLQIANLPDLYK
VFERC
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgtccggggtgattcggagactcgatgagaccgttgttaatcggattgctgcaggagaa
gttatccaacgtcctgcaaatgctatcaaagaattgcttgaaaactgtttagatgccaag
tccaccaacatacaggtgactgtgaaggaggggggtctgaaacttatccagatacaagac
aatggcactggcatcaggaaagaagatatggaaatagtatgtgaacggtttacaacaagc
aagctccagacttttgaggacctcaacgccatctcgacctatggtttccgaggagaggca
cttgccagtataagccatgttgcccatgtgaccataacaaccaaaacggctgacgccaag
tgtgcttacagagccacctactgcgatgggaaactaaagacccagcccaaaccctgcgct
ggaaaccaggggacacagatcactgcggaggatctgttctataacgtgtccaccaggagg
aaagcactgaagagccccagtgaggagtactccaggattgtggaggtggtgagcaggtat
gccatacacaactctgggaaaagctttgctgtcaaaaagcaaggcgagaccatggcagat
gtcaggaccctacccaacgcctccatactggataatatccgtgtggtgttcggcaataca
gtcagcagggagctgattgaagtgggctgtgaggatcagaagcttgcctataagctgaag
ggccacatctccaacgccaactactcagtgaagaagtgcatcctcatcctcttcatcaat
catcgtctggttgaatcgagtgccttaaaaaaagccattgagaccgtttatgctgcatac
cttcccaagaactctcacccatttctatatctcagcctggagattgcccctcataacatc
gacgtgaatgtccaccctaccaaacacgaggtgcacttcctccacgaagactgtatcatc
gagagcgttcaaaaacagatagagagcaaactcctgggctccaactcctcacgcacgtac
ttcacacagacattgttgcctgggctgtctgtctccaccagcgaggggaagtcttcctcc
aactctacaggggacagtgagcgggtctacncccatcagatggtcaggaccgacagtaga
gcccaaaagctggacgcctttctccagccggcgtccaagctggcccctactcccgccgcc
aaccctaatgggcagagcaggggggaacctgtgaccaccaatggcatagaagagatggac
aacgcagagatcctggaggaacaggcgccaggtgccacagaggatggggagggaaccagc
cgaaataccccagctgatctccccaggaagcgtccccgtgccggtcaggacgaggagcag
gaggacctgactgctgcagccacaaccaggagacgagccatcaagctgagcagtgtgaag
gagctgagagatgacatcgctgagcacgcacacaaaggtcttcaagagatgcttcagaat
cactcgtttgtgggctgtgtcaacccccagtggactctgatccagcaccataccaaactg
taccttctcaacaccaccaaactcagccgggagctattctaccaaattttgatctacgac
ttcggtaactttggcatcttgaggttatctgagcctgcgccactctatgacctggccatg
ctggctctggactccgaggagagcggctggtcggaggaggacgggcccaaggagggtctg
gcccaatacatagtcgacttcttgaagaagaaatctgagatgctggaggactacttctcc
atggagatcgaccaggaaggaaatctcaccggtttgccattgctgcttgacaagtacacc
cctcctatggagggtctgcccatgttcatcctacgtttggctactgaggtgaactgggac
aatgagaaggactgcttcagagacttcagcaaggagtgcagccagttctactctatcagg
aaacagtatgtcctggagctggagccgggagaggaggagcagggtgcagagctgaactcg
tggcgttggaaggtggagcatctcctgtttaaatccttccggagcctcttcagtccccct
aaacacttcagtgaggatggcagcgtactccagattgctaatctaccagacctctacaaa
gtatttgagcgatgctaa
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