Oncorhynchus masou masou (cherry salmon): 135510821
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Entry
135510821 CDS
T10723
Symbol
herc4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04120
Ubiquitin mediated proteolysis
Brite
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
135510821 (herc4)
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
HECT type E3
135510821 (herc4)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135510821
NCBI-ProteinID:
XP_064788155
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Position
23:40467400..40494759
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AA seq
1050 aa
AA seq
DB search
MLCWGNASFGQLGLGGIDEEIVVEPRKCDFFHGKQVCDIGCGRRHTTFLLGDGTVYTCGC
NDIGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVFAWGLATDGQLGLAN
FEECVRVPRNIKSLSDVEIAQVACGYRHSHALSRGGQVYSWGQNRYGQLGLGVAGQGIST
PQVIQSLQGIPFIQISAGGAHSFALTFSGAVFGWGRNKFGQLGLNDNNDRYYPAQLKSLR
SQRVIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNTTNHEINPRKVFELMGNVVTQIS
CGRQHTLAFIPSSGKMDSFGLGGNGQLGTRSTSNRNSPAPVKGPWVAYNGPAPTIADMEQ
GCCVKRIYAGGDQSFAHCYTPQNPLVPDDIRIPDPRRHICTLSADLTQRWLNHYTHGRLP
QEISNEIDLVFSSASCLNGSFLAGSHPDHYNTSSKCSGVDMNMARLLFHRVVQHDYPEIA
QQIAASLEKNLIPRLSSSPPDIEALRLYLTLPECPLFSDPNTYVTLAIPFAKALISLKEA
PLKVLGNWWSQFEAPVFQRLVELYKVVVVYLLKMHKVGVPHSEQRVFTCFLDTALKLLEI
LHAVNERAGHIIQYDKFYIHELDDLIDIRNDYITWIQQQMYSMAHDSAVTLCKYPFVFDA
QAKTTLLQTDAVIQMQMAVDQAQRQNFSSMFLPVVESVNPCLILIVRRENIVGDTMEVLR
KSKNVDYKKPLKVIFVGEEAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEESRLIWFANK
TFEDIDLFHLIGVICGLAIYNLTIVDLHFPVALYKKLLKRNPTLDDLKELMPDVGRSLQQ
LLDYTEDDVEDTFCLNFTVTVENFGATEVLELVPNGMDICVDNSNRPEFVSAYVDYIFNK
SVAELFESFFAGFHKVCGGKVLELFQPNELQAMVIGNTNYDWKELEKSTEYKGEYWAENP
TIKFFWEVFHDLSLEKKKLFLLFLTGSDRIPILGMKSLKLVIQPTGGGEHYLPVAHTCFN
LLDLPKYSSRETLQNKLLQAIDHNQGFNLA
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgttggggaaatgcttccttcggtcagctaggtttgggcgggatcgatgaggag
attgtggtggagccccggaaatgtgatttcttccatgggaagcaggtgtgtgatatcgga
tgtggccgacggcacaccacatttctactgggagacgggactgtgtacacctgtggctgc
aatgacattgggcagctggggcacgagaagtctcgaaagaaaccagagcaggttgtggca
ctagatgcacagaacattgtggcagtgtcatgtggggaggcccatacacttgcactgaat
gacaaaggacaagtgtttgcatggggcttggccacagatggacagctgggccttgcaaac
ttcgaagaatgtgtacgtgtgcccagaaacatcaagagtttatcagatgtagaaattgct
caggtagcctgtggatatcggcactcccatgctctgtctagaggaggccaagtctattca
tggggacaaaaccgatacggacaactagggctgggagtagctggacaaggcatctctact
ccccaagtcatccagtctttacaggggattcccttcatccagatctcagcagggggtgct
cacagctttgccctcacattctcaggggccgtatttggctgggggcgcaacaagtttggg
caactcggcctcaatgacaacaatgatcggtattatccagcccagctcaagtccctcagg
tcacagagggttatctacatctgctgtggggaggaccacactgccgcacttacaaaggaa
ggaggtgtgtttacatttggagcaggagggtatggccagcttggacataacactacaaac
catgagatcaaccccaggaaggtgtttgagctcatgggaaatgtagtcacacagatatcc
tgtggaagacagcacactctggccttcatcccctcctctggaaagatggattcatttggg
ctgggagggaacgggcagctcggtacacgctccacatccaacaggaacagccctgcccca
gtcaaaggcccctgggtggcctacaatggcccggcgcccacaatcgcagacatggagcag
ggctgctgtgttaagaggatctatgctggaggggaccagagctttgcccactgttacact
ccccagaaccctctggtgcctgacgacatcagaataccagatcccagaagacacatatgc
accttatctgctgatctcactcagagatggctgaaccattatacacacggaagactccca
caagagatttccaacgagattgatcttgtgttttcctctgcaagttgcctcaatggaagc
tttctggctggcagccatccagatcactacaacacgagcagtaaatgctcaggggtggac
atgaacatggctcgcctcttgtttcacagagtcgttcaacatgactatccagaaattgca
cagcagattgcagccagtctggaaaagaacctgattcccagactaagcagctcccctcca
gacatcgaggcactgagactctacctcaccctgccagagtgtcctctcttcagcgaccca
aacacatacgtgactctggccatcccttttgccaaggcactcatcagtctgaaagaggct
ccactgaaggtgcttggcaactggtggtctcaattcgaagccccagtcttccagaggctt
gtggagctgtataaggtggtggtggtttacctgctgaagatgcacaaggtaggagtcccc
cactcagagcagagggtcttcacctgcttcctggacacggcactcaagcttctggagatc
ctgcacgctgtgaacgaaagagccggacatatcatacagtacgacaaattctacattcac
gagttggatgacctgatagacatccgaaacgactacatcacatggattcaacagcagatg
tactctatggctcatgacagtgcggtcaccctctgtaagtaccccttcgtgtttgatgcc
caggcaaagaccacgctgcttcaaactgatgctgttattcaaatgcagatggcagtggac
caggcacagcggcaaaacttcagctccatgttccttcccgtggtggagtctgttaacccc
tgcctcatcctcattgtgaggagggagaacatcgtcggggacaccatggaggtcctcagg
aagtccaagaacgtcgactacaagaaacctctgaaggtgatctttgttggagaagaggcg
gtcgatgcagggggtgtgcggaaggagttcttccttctcatcatgagagagctcctggac
cccaaatacggcatgttccgatactacgaggagtccaggctgatctggtttgcaaacaag
acgtttgaggacattgacctgttccacctcatcggggtcatctgtgggctggccatctac
aacctcaccatcgtggacctccacttcccagtggccctgtacaagaagctgctgaagagg
aatcccacgttggatgatcttaaggagctgatgcctgatgtggggaggagtctgcagcag
ttactagactacacagaggatgatgttgaagacacattctgcttgaacttcaccgttaca
gtggaaaactttggtgccacagaggtcttagaactggttccaaatggcatggatatctgt
gttgacaactcaaacaggcctgagtttgtctctgcatacgtggactacatcttcaataaa
tcagtggccgagcttttcgagtcctttttcgcaggcttccacaaagtgtgtggtggcaaa
gtcctggagctgttccagcccaacgaactgcaggccatggtcattggcaacaccaactac
gattggaaagagcttgaaaagagcactgagtataaaggagagtattgggctgaaaatcca
accattaagttcttctgggaggtgttccacgatctctctttggagaagaagaagctcttt
ctcttgtttctcacaggaagtgaccgcattcccatcctgggcatgaaaagcctgaagctg
gtcatccaacccacgggaggcggggaacactacctgcccgttgcacacacctgcttcaat
ctattggacctgcccaaatacagcagccgggagacgctccaaaacaagcttctccaagcc
atagatcacaatcaaggtttcaacctggcctaa
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