Oncorhynchus masou masou (cherry salmon): 135510828
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Entry
135510828 CDS
T10723
Symbol
tial1
Name
(RefSeq) nucleolysin TIAR isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
omm
Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135510828 (tial1)
03041 Spliceosome [BR:
omm03041
]
135510828 (tial1)
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
135510828 (tial1)
Spliceosome [BR:
omm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
135510828 (tial1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
Nup35_RRM_2
RRM_Nup35
RBD_AKAP-17A
Motif
Other DBs
NCBI-GeneID:
135510828
NCBI-ProteinID:
XP_064788167
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Position
23:complement(40605168..40628954)
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AA seq
406 aa
AA seq
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MEDESHPKTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEQPDSRRMNSSVGFSVLQQ
SSNDPYCFVEFFEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDL
SPEITTEDIKAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLG
GRQIRTNWATRKPPAPKNVQDNGSKQLRFEDVVNQSSPQNCTVYCGGIQSGLSEHLMRQT
FSPFGQIMEIRVFPEKGYSFIRFSSHESAAHAIVSVNGTSIECHIVKCYWGKESPDMAKS
VPQVEYGQGQWGQWNQMYGSPQAQQYGQQYMANGWQVPSYGVSYGQSWNQQGFGVEDSIL
AAAAQNISRQSQSPAWVGGFGSPAPSQPGPVMPNQGNFNMAGYQTQ
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgaaagccaccccaaaacgctgtatgttggtaacctgtccagagatgtaaca
gaaattttgattcttcagctgttcacccaaattggaccttgcaaaagttgtaaaatgatc
actgagcaacccgatagcaggaggatgaactcttctgtgggattttctgttttgcagcag
tcaagcaatgacccgtattgctttgtggagttctttgaacatagagatgctgctgctgcc
ttagcagccatgaatgggaggaagatattgggaaaggaggtcaaagtaaattgggccacc
actccaagtagccagaagaaagatacatcaaatcacttccatgtgtttgtgggagacttg
agccctgagatcaccactgaggatatcaaagctgcatttgcaccttttgggaaaatatcg
gatgctcgtgttgtgaaggacatgacgacaggaaaatctaaggggtatggatttgtgtcc
ttctataacaaactggatgcagagaatgccatcgtgcacatggggggacagtggttagga
ggacggcagatcaggaccaactgggcaactcgcaagccacccgcccccaaaaatgtgcaa
gacaatggctcgaagcagctgaggtttgaagatgtagtgaaccaatccagtccccagaac
tgcacagtgtattgtggaggaatccagtcaggactgtcagagcacctcatgcgacagaca
ttctcaccctttggacaaataatggaaatccgagttttcccagagaaaggttactctttc
atcaggttttcctcccatgaaagtgctgcccatgcaattgtctctgtaaatggaacgtcc
attgaatgccacatagtgaagtgctactggggcaaagaatcccccgacatggccaaaagc
gtaccacaggtggagtacggtcagggtcagtggggacagtggaaccaaatgtatgggagc
ccccaggcccagcagtatgggcaacagtacatggcaaatggttggcaagtgccttcttat
ggagtgtcttatggacagtcatggaatcagcaaggatttggtgtagaggattccattctt
gccgcagcagcacagaacatttcaagacagtcccagtccccagcctgggtgggagggttt
ggatccccggcgccgtcccagcccggtcctgtgatgcccaaccagggaaacttcaacatg
gctggctaccagacacagtga
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