Oncorhynchus masou masou (cherry salmon): 135510864
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Entry
135510864 CDS
T10723
Name
(RefSeq) TATA-binding protein-associated factor 172-like
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
Transcription machinery [BR:
omm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
135510864
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135510864
NCBI-ProteinID:
XP_064788229
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Position
23:complement(42168637..42240328)
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AA seq
1854 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAIQLGDVVKLHPHELNNLLSKVLTYLRSPNWDTRI
AAGQAVEAIVKNIPEWNPSPKPKEESCADFSPEDSSSDRLSFYRFDISRLLKHGASLLGS
AGAEFEVQDDKSGEVDPKERLARQRKLLQRKLGLDMGAAIGMDTMELFNDEDLDTQYTCT
PSGPKAQGRGERGSEPCSSNHVPMQAAEIIDSEFRPGMSNRQKNKAKRMAKLVAKQRSRD
MDTNERSNDSFEGEPEEKHRKTSNVVIEQPATEHKVLIDNVPDNSSLLDETQEWPLESFC
DELCNDLFNPSWEIRHGAGTGLREILKSQGAGGGKLVGSTAEQMARHHQEWLEDVVIRLL
CVFALDRFGDFVSDEVVAPVRETCAQTLGVALRHMTDSGVAMTVDILLKLLTEDQWEVRH
GGLLGIKYGLAVRQDLISALLPRVLPAITQGLQDLDDDVRAVAAAALIPVVDGLVQLLPN
KVPFIVNSLWDALLELDDLTASTNSIMTLLSSLLAYPQVRQCSMQQSLTVLVPRVWPFLR
HTISSVRRAALETLFTLLSKADQSCALWLNQVLQDMLRHIFQSCILESNQEILDLIQKVW
TELLRQAPQQYVVAASCPWMGAWLCLMMQASHIPIDINMLLEVKSRCKEKAGGKPRQGAL
VQVKETVQEYIAGAETVTEDPVTRDYVVTRARLMAAKLLGALCRCICDPQLNSSSQDIRP
AESLGQLLLFHLNSKSALQRIVVALVLCEWAAVQKVVSAMVQPRLLAILSEQLYYDEIAI
PFTRMQNECKQLIALLADAQIDVRDRLNCSVFTIDQANELVTTIFAESTVGLDTKSKQFH
PLDSKRQQAQSTVGETSVEWQQLHLRVHMFTACAVVNLQALPDKLNPVVRPLMEAAKREE
NTLVQGYAASFIAKLLQQCATRQPCPNSKIVKNLCSSICMDPLLTPSSACPVPPTQTAKA
GMSEKECMHHMVNKTKGIITLYRHQRAAFVITSKRGPTPKTSKTPTTELPPGSTITTDTD
ENKKPFLVQRRGAEFSLTTVARHFGQELTGSLPYLWEFVVGPLRAVVENNQGIDAKLQLE
RGDAAAQELVNSLQVLEVTAGAMAPELKPLLLEHLPHLFTCLQHPYTAVRHMAARCVGVL
SKIATMETMHLFLECVLPWLGCIEDGTKQEGAIEAMACVMEQLDVDIVPYIVLLVVPVLG
RMSDPSDSVRFMATQCFATLIRLLPLEAGIPDPPTMSDDLIRQKARERHFMEQLLDSRKL
ENYKIPVPIKAELRKYQQDGVNWLSFLNKYKLHGILCDDMGLGKTLQSICILAGDHYLRA
QEYAKTKAADCTPLPSLVVCPPTLTGHWVDEVGKFCTDEYLNPLHYTGPPTERARLQHQV
KKHNLVVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAIKQLAANFRVILSG
TPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDAKSSSREQEAGVLAMEALH
RQVLPFLLRRMKKDVLQDLPPKIIQDYYCNLSPLQVQLYEDFAKSRAKVSVEDTISTASI
HEEEKPKLKATGHVFQALQYLRKLCNHPGLVLLPQHPEYKRITDQLAAQHSSLRDIQHSP
KLSALKQLLLDCGLGSSGSAEGTEAVVAPHRVLIFCQLKSMLDIVEHDLLKPQLPAVTYL
RLDGSVPTGLRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQ
AMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMSIANTVISQENASLQSMGTDQLL
NLFTLDKDGKDDKGESSSGGKASIKNVLDGLGDLWDQQQYETEYNLDSFMHSLH
NT seq
5565 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgtcaaggcttgatcgtctgttcatcctgcttgacactggaactacaccggtg
acgaggaaggctgctgccatacagctgggagatgtggtcaaactccacccgcatgagctc
aacaaccttttgtcgaaggtgttgacatacctgagaagtccaaactgggacactcgtatc
gctgcaggtcaggcagtggaggccattgtgaagaatatcccagagtggaacccgtcaccc
aagcccaaagaagagtcttgtgcagacttctccccagaagactcctcctctgaccggttg
agtttctaccgctttgacatttcccgcctgctcaaacatggtgcttctctgcttggttcc
gccggtgcggagtttgaggtccaggatgacaagtctggtgaggtggaccctaaagagcgt
ctggcccgccagaggaagctgttgcagaggaagctgggacttgacatgggtgccgccatc
ggcatggacacgatggagctgttcaacgacgaggacctggacacccagtacacctgcacg
ccgagtggccctaaggcccagggacggggagagaggggctctgaaccctgctccagcaat
cacgtgcccatgcaggcagcagagataatagactcagagtttcgaccaggcatgagcaac
cgacagaagaacaaggctaagaggatggccaagctagtggcaaagcaacgatccagagac
atggataccaacgagagaagtaatgacagttttgagggggagcccgaggagaagcacagg
aaaactagtaacgtagtcatcgagcaaccggcaacggagcataaagtcttaatcgataac
gttccagacaactccagtctcttggacgagacccaggagtggcccctggagagcttctgt
gatgagctctgtaatgacctcttcaacccctcatgggagattcgtcacggagcaggcaca
ggcctcagggagatcctcaagtctcaaggcgctggaggtgggaagctggtgggaagcact
gcagaacagatggcgcggcaccaccaggagtggctggaggatgtggtcatccggctgctc
tgtgtctttgctctggatcgttttggagattttgtctctgatgaggtggtggctccggtt
cgagagacctgtgcccagacactgggcgtggccttgcgccacatgactgacagcggtgtt
gccatgacagtagacattctgctgaagctgctgacggaggaccagtgggaggtccggcac
gggggtcttctgggcatcaagtatggcctggcagtcagacaggacctgatatccgctctg
cttccacgggtgctccctgccatcacacaggggctgcaggacctggatgatgatgtcaga
gcggtggcggccgcggccctcatccctgtggtggacgggttagtgcagctactccccaac
aaggtcccattcatagtgaactccctgtgggacgctctcctggagctggatgacctgaca
gcctccaccaacagcatcatgaccctactgtcctctctgctcgcctaccctcaagtccga
cagtgcagcatgcagcagtccctaacggtcctcgttcctcgggtctggccattccttaga
cacaccatatcatcagttagacgggccgcactagagacccttttcaccctactatccaaa
gctgaccagagctgtgcattatggctcaaccaggtcctgcaagacatgctccgacacatc
ttccagtcctgcatcctggagagcaatcaggagatcctggacctcatccaaaaggtgtgg
accgagctgctgcgccaggcccctcagcagtacgtagtagcagccagctgcccctggatg
ggcgcctggctctgtctgatgatgcaagcctctcacatccccatagacattaacatgctg
ctagaagtcaagtctcgctgcaaggagaaggctggtgggaagcctcgccagggagccttg
gttcaagtgaaggagactgttcaggagtacatcgccggggcagaaaccgtgaccgaggac
ccagtgacgcgggactatgtggtgacacgggctcgactcatggccgctaagctgttgggg
gccctgtgtcgatgtatttgcgacccgcagctcaattcatcctcccaggacatccggccg
gctgagtcgctgggtcagctgctcctcttccacctcaactccaagtctgccctgcagcgc
atcgttgtggccctggtcctctgtgagtgggccgccgtgcagaaggtggtgtcagccatg
gtacagccccgcctgttagccatcctgtcagagcagttgtactacgatgagatcgccatt
cccttcacacgcatgcagaacgagtgtaagcagctcatcgccctgctggccgacgctcag
atcgacgtgcgcgaccgcctcaactgcagcgtgttcactatcgaccaggccaacgaactg
gtgaccaccatcttcgcagagtccaccgtgggcctggatacgaagtccaaacagtttcat
ccactggacagcaagcgtcagcaggcccagtccacggtgggcgagaccagtgtggagtgg
cagcagctgcacctgcgcgtccacatgttcaccgcctgcgccgtggtcaacctgcaggcg
ttaccagacaagctgaacccagtggtgcgtccgctcatggaggcagctaagcgggaggag
aacaccctggttcagggttacgccgcctccttcatcgccaagctgctgcagcagtgtgct
actaggcagccgtgtcccaattccaagatcgtcaagaacctgtgttcgtcgatctgcatg
gaccccctactcacgccctcctcagcctgccccgtgccccccactcagactgccaaagct
ggcatgtcggagaaagaatgcatgcaccacatggtcaataagactaagggcattatcacc
ctctaccgccaccagagggcagcatttgtcatcaccagcaagaggggccccacccccaaa
acctccaagacccccaccactgaactgccacccggcagcaccatcaccacagatactgat
gagaataaaaagccatttctcgttcagagaagaggtgccgagttctctctgacgacggtt
gccaggcactttggccaggagctgacggggtcactgccctacctgtgggagtttgtggtg
ggacctttgagggccgtggtggagaacaaccaaggcatcgatgcaaagctccagttggag
aggggggatgctgcagcccaggagctggtcaactctctgcaggtgctggaggtcacggct
ggagccatggcccccgagctcaaacctctgttgttggagcacctgccccacctgttcacc
tgtctgcagcacccgtacacggccgtgcgtcacatggcggcgcgctgcgttggtgtgctc
agtaagatcgctaccatggagaccatgcacctgttcctggaatgtgtgctgccctggctg
gggtgcatcgaggatggcactaagcaggagggggccatcgaggccatggcctgtgtgatg
gagcagttggatgtggatatcgtgccgtacattgtgctgctggtggtgccggtgctgggc
cgcatgagtgaccccagtgacagcgtccgtttcatggccacgcagtgcttcgccaccctc
atccgcctgctaccactggaggcgggtatcccggatcctcccaccatgtcggatgatctg
attcgccagaaggccagagagcgtcacttcatggaacagctgctggacagcaggaagttg
gagaactacaagatccctgtgcccatcaaggctgagctccgcaagtatcagcaggatgga
gtgaactggctgtccttcctgaataagtacaagctgcatggtatcctgtgtgacgacatg
ggcctgggcaagaccctgcagtccatctgcatccttgctggggaccactacctcagggca
caggagtatgccaagaccaaggcagcagactgcacccccctgccctctctggtggtgtgc
ccccccaccctgacgggtcactgggtggacgaggtgggcaagttctgcaccgacgagtac
ctgaaccccctgcactacacaggaccccccacggagcgagcacggttacagcatcaagtg
aaaaagcacaacctagtagtagcctcctacgatgttgtacgaaacgacatagactttttt
aggaatataaaattcaattactgtatcctcgacgagggccatgtgatcaagaacgggaag
accaagctctctaaagccattaagcagttggcggccaacttccgagtcatcctatcagga
acgcccatccagaataatgttctggagctgtggtcgctctttgacttcctcatgcccggt
ttcctgggcacagagcgccagtttgctgcccgctacggcaagcccatcctggccagccgt
gacgccaagagctcgtcacgcgagcaggaggccggggtcctggccatggaggcgctgcat
cgccaggtgctgcccttcctcttgaggagaatgaagaaggacgtgctgcaggacctgccc
cccaagatcatccaggactactactgcaacctcagccctctacaggttcagctgtatgag
gactttgccaagtctcgggccaaggtcagtgtggaggacaccatctctacagcctccatc
cacgaagaggagaagcccaagctgaaggccacgggccacgtgttccaggctctgcagtac
ttgcggaagctgtgtaaccacccaggcctggtactgctgccacagcacccggagtacaag
cgcatcacagaccagctggcagcacaacactccagcctccgagacatccagcactcgccc
aaactctcagctctcaaacagttgttgttagactgtggtctgggcagcagcggctcagcg
gagggcacagaggcggtggtggccccgcacagagtgctgatcttctgtcagctgaagagc
atgctggacatcgtggagcacgacctgctcaagccccagctgcccgccgtcacctacctg
cgactggacggcagcgtcccgactggcctgcgccactccatcgtctccaggttcaacaac
gacccctccatagacgtgctgctgctcaccacccacgtgggcggtctgggtctgaacctg
accggcgctgacacggtggtgtttgtggaacacgactggaaccctatgagagacctacag
gccatggaccgtgcacacaggataggacagaaacgcgtagtgaacgtgtatcgtctgatc
acgcgtggcaccctggaggagaagatcatgggcctgcagaagttcaagatgagcatcgcc
aacactgtcatcagccaggagaacgccagtctgcagagtatgggcaccgaccagcttctc
aatctcttcaccttggacaaggatgggaaggatgataagggcgagtcgtcctctggaggg
aaagcctccattaagaacgtgctggacggcctgggggacctgtgggaccagcagcagtac
gaaaccgaatacaacctggacagcttcatgcactcgctccactag
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integrated database retrieval system
