Oncorhynchus masou masou (cherry salmon): 135511006
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Entry
135511006 CDS
T10723
Symbol
fancl
Name
(RefSeq) E3 ubiquitin-protein ligase FANCL isoform X1
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03460
Fanconi anemia pathway
omm04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
135511006 (fancl)
09124 Replication and repair
03460 Fanconi anemia pathway
135511006 (fancl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135511006 (fancl)
03400 DNA repair and recombination proteins [BR:
omm03400
]
135511006 (fancl)
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135511006 (fancl)
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135511006 (fancl)
DNA repair and recombination proteins [BR:
omm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
135511006 (fancl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCL_d3
FANCL_C
FANCL_d1
FANCL_d2
zf-RING_2
SLX1_C
zf-rbx1
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
135511006
NCBI-ProteinID:
XP_064788501
LinkDB
All DBs
Position
23:complement(50443401..50458448)
Genome browser
AA seq
395 aa
AA seq
DB search
MLAWSANHVVILAQHHTADFELSRMESLLVKESPLLLPLNKEKTVYDGFITVQERDFRIR
ILLPPDHQLKLAKLQCCWQLKQLLCGYGHIVKQRLHHSPDLVSFVLELKTVLEVALKCRP
ECRSIPPPQYYSQLIIEMEDLGWDKLVSIDTEFCTLRLRAEDSSGRQHVVTVKLKPKHPV
EAPWCSADLPVPLAMTWTPQSSLGHVHTQFLLLLESLAEFWAVLDEIDEKTWVLEPEKPS
RADTMRRIAIANNVSIKVEVDTQHPKMLPECCLLGAEHVVTPLRNKLNANMHLWNPDCSI
LQNLRDVLEIEFPSPATHEKSSFSAECGICYAYRLESAIPDQVCNDPRCGQPFHQACLYE
WLRGLPSSRQSFNIVFGECPYCSKPITVKMSTQKP
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgctagcatggtcagctaaccatgttgttattttagcccagcaccacacagctgacttc
gaactctcaagaatggagagtttacttgtcaaagagagtccgctgttgttacctctcaac
aaggagaaaactgtctatgatggatttatcacggttcaggagagagacttcagaataaga
atactgcttccaccagatcatcaacttaaactggctaagcttcaatgctgctggcagttg
aaacagctattgtgtggatatggacacatagtaaaacagagattacatcactctcctgat
ctagtcagctttgttctggagctgaagactgtcctggaagtggccctcaagtgcaggcca
gagtgtcgctccatcccccctccacagtactactctcagctcatcattgagatggaggac
ctgggatgggataagctggtgtccattgacacggagttctgcacactgagactgagggct
gaggactcctcagggcgacagcacgtcgtcaccgtcaaactgaagcccaagcaccctgta
gaggccccatggtgctccgcagacctacctgttccactggccatgacttggacaccacag
agttctctgggtcatgttcacactcagttcctgctgcttctagagtctctggcggagttt
tgggcggttctagatgagatcgatgaaaagacctgggttctagagccagagaaacccagc
agggccgacaccatgaggaggattgccattgcaaataacgtgtccataaaagtggaggtt
gacacgcaacacccaaagatgttgccagagtgctgcctgcttggagctgagcatgtggtt
acacctttgaggaacaagctgaatgccaacatgcatttatggaacccggactgcagcatc
ttgcaaaacctccgggatgttttggagatagaattcccatcacctgccacccacgaaaaa
tctagtttcagtgcagagtgtgggatctgttacgcctaccgtctggagtcggccattcct
gatcaagtgtgcaacgaccctcgctgcggccaacccttccaccaggcctgtctgtacgag
tggttgcgtggactcccttccagtcgccagagcttcaacatagtgtttggagagtgtccc
tactgcagcaagcccatcacagtgaagatgtccacccagaaaccctga
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