KEGG   Oncorhynchus masou masou (cherry salmon): 135511047
Entry
135511047         CDS       T10723                                 
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform
  KO
K04354  serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
omm  Oncorhynchus masou masou (cherry salmon)
Pathway
omm03015  mRNA surveillance pathway
omm04261  Adrenergic signaling in cardiomyocytes
omm04382  Cornified envelope formation
omm04530  Tight junction
Brite
KEGG Orthology (KO) [BR:omm00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    135511047
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    135511047
 09150 Organismal Systems
  09153 Circulatory system
   04261 Adrenergic signaling in cardiomyocytes
    135511047
  09158 Development and regeneration
   04382 Cornified envelope formation
    135511047
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:omm01009]
    135511047
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:omm03019]
    135511047
   03036 Chromosome and associated proteins [BR:omm03036]
    135511047
Protein phosphatases and associated proteins [BR:omm01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     135511047
Messenger RNA biogenesis [BR:omm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     135511047
Chromosome and associated proteins [BR:omm03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     135511047
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40_Prp19 WD40 Beta-prop_WDR5 WD40_CDC20-Fz Beta-prop_IFT122_1st WDR55 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_IFT140_1st DSE1_N Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_HPS5 WD40_MABP1-WDR62_1st
Other DBs
NCBI-GeneID: 135511047
NCBI-ProteinID: XP_064788592
LinkDB
Position
23:complement(53550992..53555846)
AA seq 447 aa
MAGVAGGNDFQWCFSQVKGAIDEDVAEADIISTVEFNHSGELLATGDKGGRVVIFQHEQE
CKNRPNLRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNSAHFLLSTNDKTIK
LWKIGERDKRAEGYNLKDEDGRLRDPFRITSLRVPVLMPMDLMVEASPRRVFANAHTYHI
NSISVNSDHQTYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAECHPNQCN
VFVYSSSKGTIRLCDMRTAALCDSHTKFFEEPEDPSSRSFFSEIISSISDVKFSHSGRYM
MTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSAIMTG
SYNNFFRMFDRNTRKDITLEASRESSKPRATLKPRKVSTGGKRKKDEISVDSLDFNKKIL
HTAWHPKENVIAVAATNNLYIFQDKIN
NT seq 1344 nt   +upstreamnt  +downstreamnt
atggcaggagttgccggtggaaatgattttcagtggtgtttctcacaagtgaaaggggcg
atagatgaagatgttgcagaagctgatatcatctcaacggttgaattcaaccactctgga
gagttgctagcaactggagacaagggaggcagagttgtcatatttcaacatgaacaggag
tgtaaaaatcgaccaaacctgcgaggggaatacaatgtttatagcacttttcagagtcac
gaacctgaatttgactacttgaaaagtttagaaattgaggaaaaaattaacaaaataaga
tggttaccccaacaaaactcggctcactttctactctcaacaaatgataaaactatcaaa
ttgtggaaaatcggtgaacgagacaagcgggctgagggttacaacttgaaagacgaagac
ggacgtctcagggatccctttagaattacttccctacgggtgccagtgctgatgcccatg
gatctcatggtagaagcaagtcctcgtagggtgtttgccaacgctcacacatatcatatt
aattcaatttctgtaaatagcgatcatcaaacatacctctccgcggatgatctaagaatt
aatctatggcacttggaaatcacagaccgaagttttaacattgtagacatcaagcctgcc
aacatggaggaactgacagaggtgatcacagcggctgagtgccatccaaaccaatgcaat
gtatttgtgtacagcagtagcaaaggcaccatacgcctctgtgacatgcgaacagcagca
ctctgcgatagccacaccaagttctttgaggagcctgaggatccaagcagcaggtcattt
ttctctgagatcatctcgtccatctctgatgtgaagttcagtcacagcgggcgctacatg
atgacacgggactacctctccgtcaaggtgtgggacctcaacatggagaacaggccagtc
gagacatatcaggttcatgaataccttcggagcaagctttgctcgttatatgaaaatgat
tgcatcttcgacaagtttgagtgctgctggaacggtagcgacagtgccatcatgaccggc
tcctacaacaactttttccgtatgtttgaccgcaacaccaggaaggacatcacactggag
gcctctagggagagcagcaaaccgcgggctacactcaaaccccgcaaagtctccaccggt
ggcaagaggaagaaagacgaaattagcgtggacagcctggacttcaacaagaagatcctg
cacaccgcctggcaccccaaagaaaacgtcatcgctgtggcggccaccaacaacctgtac
atattccaggacaagatcaactaa

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