Oncorhynchus masou masou (cherry salmon): 135511123
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Entry
135511123 CDS
T10723
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04517
IgSF CAM signaling
omm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
135511123
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
135511123
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omm04812
]
135511123
Cytoskeleton proteins [BR:
omm04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
135511123
Intermediate filaments
Intermediate filament-binding proteins
135511123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
CH_2
DUF7854
Motif
Other DBs
NCBI-GeneID:
135511123
NCBI-ProteinID:
XP_064788756
LinkDB
All DBs
Position
23:complement(58919741..59083755)
Genome browser
AA seq
2357 aa
AA seq
DB search
MELQRVTSMPGPLSPGHLSPGSHSPGALSPSGPGPSLATSPDPGYSAKQAAFNYNQLEGR
FKQLQDEREAVQKKTFTKWVNSHLSRVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPT
KGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDIRV
ETEDNKEKKSAKDALLLWCQMKTAGYPNVNIHNFSTSWRDGMAFNAILHKHRPDLIDFDK
LKKSNAHHNLQNAFNLAEQHLGIHKLLDVEDISVDHPDEKSVITYVVTYYHYFSKMKALK
VEGKRIGKVLDNAIETDNMIQKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAF
NTYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVYMPRDGKLISDINKAWERLEKSEH
ERELALRTELIRQEKLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKH
EAIETDIGAYEERVQAVLSVAKELEAENYHDIKRVAARKDNVLRLWEYLLELLKARRIRL
EMNLGLQRIFQEMLHIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAIQANRV
KAVNNNAQKFAIDAEGYKPCDPQVIRDRMAHMEFCYAELSQLAADRCARLEESRRLWKFF
WEMAEEEGWIREKEQILSSEDCGKDLTGAVRLLSQHRAFEDEMSGRAGHLQQTIKQGEEL
VAADHFGADKIRKRIQDIQAQWAALEGLSAVRKARLEEACNLHQFQTDADDIDAWMLDVL
RIVSSADVGHDEFSTQALVKKHKDVAEEITSYRPVIDALHEQSKTLPKEQTGSEEVQGRL
AGIEERYKEVAELTRLRKQALQDALALYKMFNEAAACEVWIDEKEQWLNSMEIPEKLEDL
EVVQHRFESLEPEMNNQASRVAVVNQIARQLIHNGHPSEKEIKAQQDKLNTRWSQFRDLV
DLKKDSLNSALGVQNYHLECNETKSWIREKTKVIESTQELGNDLAGVMALQRKLTGMERD
LAAIEDKLGELGKEGECLATEHPDQAQGIMGRLAEITGVWDEMKGTLKNREESLGEASKL
QQFFRELDDFQSWLSKTQTAIASEDMPNTLTEAEKLLAQHEGIKNEIRNYEEDYQKMRDM
GEMVTQGQTDAQYMFLRQRLQALDTGWNELHKMWENRQNLLSQSHAHQLFLRDTKQAEAF
LNNQEYVLAHTEMPRTLEGAEGAIKKQEDFMTTMDANGEKIKAVVDTGRRLVSDGNVNAD
RIQEKVDCIDERHKKNRMVASELLCKLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYD
EARNLHSKWLKHQAFMAELQSNKEWLDKIEKDGMQLIAEKPETESMVKEKLAALHKMWDD
LESTTQTKAKCLFDANKAELFTQSCADLDKWLVGVDGQIQSDDYGKDLTSVNILLKKQQM
LESQVEVRQKEVEELQSQAQVLSQEGKDTDEVDGQRRIVEKKFQQLLDPLRKRKGNLMAS
REIHQFNRDMEDEILWVEERMPLAISTDHGNNLQTVQLLIKKNQTLQKEIQGHQPRCDDI
FERSLQVLKDDDDSLSGEGIHQRLADLRRLWAQILEETGKRHGRLEEAHMAQQYYFDAAE
AEAWMSEQELYMMSEEKAKDEQSSVAMLKKHQILEQAVEDYAETVHQLSQTSRGLTAAGH
PESERIGMRQSQVDKLYAGLKDLSEERRGKLDERFRLFQLNREVDDLEQWIAEREVVAGS
HELGQDYEHVTMLQERFREFARDTGNIGQERVDTVNQLADELINSGHTDAATIAEWKDGL
NEAWADLLELIDTRTQILAASFELHKFYHDAKEILNRILDKHKKLPEELGRDQNTVETLQ
RMHTTFEHDIQALGTQVRTLQEDAVRLQSAYAGDKADDIQKREGEVLEAWRTLLEACDGR
RVRLLDTGDKFRFFSMVRDLMLWMEDVIRLIEAQEKPRDVSSVELLMNNHQGIKAEIDAR
NNSFTNCIELGKSLLARKHYALEEIKEKLLQLTDKRKDMIDKWEDRWEWLRLVLEVHQFG
RDAGVAESWLLGQEPYLSSREMGQNVDEVEKLIKRHEAFEKSAATWEERFSALERLTTME
LLEVRRQQEEEERKRNPPPAETQTDNASPQKREGEQVSQNGLPSDQDSPRDNGEESDIVN
GVEEPSPGGSPGEARKVKPSQAATLPAKSQDSAPANQMEGYLHRKHEWEGHNKKASNRSW
HNVYCVINNREMGFYKDHKSASQGIPYHNQIPISLKDAACEVALDYKKKKHVFKLKATDG
NEYLFQANEDEEMNSWMQAISSAASSDKTEMTPSSHSTPASSRAQTLPASVALATESSPG
KREKDKEKRFSLFSKKK
NT seq
7074 nt
NT seq
+upstream
nt +downstream
nt
atggagctacagagggtgaccagtatgcctggccccttgtccccagggcatctctctccg
gggtcccactccccaggggccctgtccccttctgggcctggcccctctctagccaccagc
cctgatccgggctactccgccaaacaggctgccttcaactacaaccagctggagggccgc
tttaagcagctgcaagatgagcgcgaggcggtgcagaagaagactttcaccaagtgggtc
aactcccacctatccagagtgtcctgcaggatcactgacctctatatggacctgagggat
ggccgtatgctcatcaaactactggaggtcctctctggggagagactgcccaagcccact
aaggggcgcatgcgtatccactgcctggagaacgtggacaaggccctgcagttcctcaag
gagcagagggtccatctggagaatatgggctcccacgacattgtcgacggcaaccaccgc
ctcaccctcggcctaatctggaccatcatcctccgcttccagatccaggacatcagagtg
gagactgaggacaacaaggagaagaagtctgctaaagatgccctgctgctgtggtgccag
atgaagactgcaggatatcccaacgtgaacattcacaacttcagcactagctggagagat
ggcatggctttcaacgccatcctccacaaacacagacctgacctgatagactttgacaag
ctgaagaagtccaacgcccaccacaatctgcagaatgccttcaacctggcagagcaacac
ctgggcatccacaagctgctggacgtagaggatatcagcgtggaccacccggatgagaag
tccgtcatcacctatgttgtgacctactaccactacttctccaaaatgaaggctctgaag
gtggagggaaaacgtattgggaaggtgctggacaatgccattgagacagataacatgatt
cagaaatatgagagtctggcctctgacctcctggaatggattgaacagaccatcatcatc
ctcaacaaccgcaagtttgccaactccttagtgggggtgcagcagcagcttcaggccttc
aacacctaccgtaccgtggaaaagccccccaagttcacagagaagggcaacctggaggtt
ctcctcttcaccattcaaagtaagatgagggccaacaatcagaaggtctacatgccacgg
gacggcaaactcatctcagacatcaacaaggcctgggagaggctggagaagtctgagcat
gagagggagctggcgctgaggacggagctgattcgtcaggagaaactggagcagctggcc
cgccgctttgaccgcaaggccgccatgagagagacctggctgagtgaaaaccaacgcctc
gtctcgcaggacaactttggcttcgacctgcaggcagtggaggctgccaccaaaaagcac
gaggccattgagacggacatcggcgcctacgaggagcgtgtgcaggctgtgctctctgtg
gccaaggagctggaggcggagaactatcatgacatcaagcgcgtggctgcgaggaaggac
aatgtgctgcgtctgtgggagtacctgctggagctgctgaaggcccggcgcatccggctg
gagatgaacctgggcctgcagaggatctttcaagagatgctccacatcatggactggatg
gatgagatgaagatgctgctgctgtcccaggactatgggaaacacctgctgggagtggag
gacctgctgcagaagcatgctctggtggaggctgatatcgccatccaagccaaccgcgtc
aaagccgtcaacaacaacgctcagaagttcgccatcgacgcagagggctacaagccctgt
gacccccaggtgatccgagaccgcatggcccacatggagttctgctacgcagagctgagc
cagctggccgctgatcgctgcgcccgcctggaggagtcccgccgcctctggaagttcttc
tgggagatggccgaggaggagggctggatccgggagaaggaacagatcctgtcctcggag
gactgtggcaaggacttgacgggggccgtgcgcctgctgagccagcatcgcgccttcgag
gacgagatgagcggtcgcgctggccacttgcagcagaccatcaaacagggagaggagctg
gtggccgccgaccacttcggagccgacaagatccgcaaacgcatccaagacatccaggcg
cagtgggcggccctggaggggctgtctgcagtcaggaaggcccggttggaggaggcctgc
aacctgcaccagttccagactgatgccgatgacatcgacgcttggatgctggatgttctc
cgcatcgtgtccagtgctgacgttggccacgacgagttctccacccaggccctggtcaag
aagcacaaggacgtggccgaggagatcaccagctaccgaccagtcatcgacgccctgcac
gagcagtccaaaacgctacccaaggagcaaactggctcagaggaggtgcaggggcgcctg
gcaggcattgaagagcgctacaaggaggtggctgagctgacccggctgaggaaacaggcc
ctgcaggatgccctggccctctataagatgttcaacgaggcggctgcctgtgaggtgtgg
atcgatgagaaggagcagtggctcaacagtatggagataccagagaaactggaagatctg
gaagtggttcagcacaggtttgagagtctggagccagagatgaacaaccaagcatcccgc
gttgccgtggtgaaccagattgctaggcagctcatccacaatggtcaccccagtgagaag
gagatcaaagcccaacaggacaaactcaacaccagatggagccagttccgtgacctagtt
gacctgaagaaagactctctcaactcagctctgggcgtgcagaactaccacctggagtgc
aatgaaaccaagtcgtggatccgtgagaagaccaaggttatcgagtccacccaggagctg
ggcaacgatcttgccggggtcatggccctacagcgcaaactcaccggcatggagcgtgac
ctggctgccatcgaggacaagctgggagaactggggaaagagggggagtgcctggcgact
gagcaccctgaccaggcccagggcatcatgggtcgtctggcggagatcacaggggtgtgg
gatgagatgaagggcaccttgaagaatcgcgaggagtctcttggcgaggccagcaagctg
cagcagttcttccgggagctggatgacttccaatcatggctgtccaagacccagacggcc
atcgcctcagaggacatgcccaacacactgacggaggccgagaagcttctggcgcagcac
gagggcatcaagaacgagatccgcaactacgaggaggactaccagaagatgagggacatg
ggcgagatggtgacccagggccagacggacgcccagtacatgttcctgaggcagaggctg
caggcactcgacacgggctggaacgagctgcacaagatgtgggagaaccgtcagaaccta
ctgtcccagtcccatgcccaccagctgttcctcagggacaccaagcaggctgaggccttc
ctcaacaaccaggagtatgtgctggcccatacagagatgcccaggactctggagggggcg
gagggagccattaagaagcaggaggacttcatgaccaccatggacgccaacggggagaag
atcaaagctgtggtggacaccggacgcaggctggtcagcgatggaaatgtcaacgctgac
agaatccaggagaaagtggactgtatcgatgagagacataagaagaaccgcatggtggcc
agtgagcttctctgtaagctgaaggataacagagacctgcagaagttcctccaggactgc
caagagctctccctctggatcaatgagaagatgcttacagctcaggacatgtcgtacgac
gaagccagaaacctccacagcaaatggctcaaacaccaggcgttcatggccgagctgcag
tccaacaaggagtggctggacaagatcgagaaggatggaatgcagctgatagctgagaag
ccggagacagagtccatggtgaaggaaaagctggcagcgctccataagatgtgggatgac
ctggagtccaccacccagaccaaggccaagtgtctgtttgatgccaacaaggccgagctg
ttcactcagagctgtgccgacctagacaagtggctggtaggagtggatggacagatccaa
tcagacgactacggcaaagatctgaccagtgtcaacatcctgctcaagaaacaacagatg
ctggagagccaggtggaggtgcgtcagaaggaggtggaggagctgcagagccaggcccag
gtcctcagccaggaggggaaggatactgacgaggtggacggccagcgccgcatcgtggag
aagaagttccagcagctgctggaccctctacggaagaggaagggaaacctcatggcctcc
cgcgagatccaccagttcaacagagacatggaggatgagatcctctgggttgaagagcga
atgccacttgcaatatcaacagaccacggaaacaacctgcaaacagtccagttactcatc
aagaaaaaccagaccctgcagaaggagatccagggccaccagccccgttgtgatgacatc
tttgagcggagcctgcaggtcctcaaggatgatgacgacagcctcagcggcgaggggatc
caccaacggctggccgacctacggcgcctgtgggcccagattctggaggagacgggcaaa
cgccatggacgcctggaggaggcccacatggcccaacagtactactttgatgctgctgaa
gccgaggcctggatgagcgagcaggagctctacatgatgtcagaggagaaggccaaggat
gagcagagctctgtggccatgttgaagaagcaccagatactggagcaggctgtggaagac
tacgctgaaactgtccaccagctgtcccagacaagtagaggcctgacggccgccgggcac
cctgaaagtgagcggatcggcatgcgtcagtcccaggtggataagctgtacgcggggctc
aaggacctgtcggaggagaggagggggaagctggacgagcggttccgtctgttccagctc
aacagggaggtggatgacctggagcagtggatcgctgaaagggaagtagtggctgggtca
catgagctgggacaggactacgaacatgtcacgatgcttcaggagcgtttccgtgagttt
gctcgcgacacgggcaacatcggtcaggagcgtgtggataccgtcaaccagttggcggat
gagctcatcaactcaggccacaccgacgcggcaacaatcgcggagtggaaggacgggctg
aatgaagcatgggccgacctgctggagctaatcgacacacgcacgcagatcctggcggct
tcctttgagctgcataagttctaccatgacgccaaggagatcctcaaccgcatcctggac
aaacacaagaagctgcctgaggagctgggccgagaccagaacacagtggagaccctgcag
aggatgcacaccacctttgaacacgacatccaggccctggggacacaggtgaggacgttg
caggaggatgctgtgcgtctgcagtctgcctacgccggagacaaggctgatgacatccaa
aagagagagggtgaggtgctggaggcctggaggaccctgctggaggcctgcgacggccgc
agggtcagactgctcgacaccggcgacaagttccgcttcttcagcatggtgcgagacctc
atgctctggatggaggacgtcatccgcctcatcgaggctcaggagaagcccagggacgtg
tcgtccgtggagctcctgatgaacaaccaccaaggcatcaaggctgagatcgacgcccgc
aacaacagcttcaccaactgcatcgagctgggcaagtccctgttggcaaggaaacactac
gcattagaggagatcaaagagaagttactacagttgacagacaaaaggaaagacatgatt
gacaagtgggaggacagatgggagtggctaagattggttttggaggtgcaccagtttggt
agggatgcgggtgtggctgagtcatggctgctgggacaggagccgtacctgtccagcagg
gagatggggcagaacgtggacgaggtggagaaactcatcaagagacacgaggcctttgag
aagtccgctgccacctgggaggagcgcttctcagcgctggaacggctgactacgatggaa
ttactggaagtgagaagacagcaagaggaggaagagaggaagaggaatccgccacctgca
gagacccagacggacaatgcatcgccacagaagagggagggtgagcaggtgtctcagaac
ggactgccatcggaccaggactcccctcgggacaacggagaggaaagtgacatcgttaat
ggggtggaggagcccagcccaggcgggtcgcccggtgaagcacgcaaggtcaagcccagc
caggctgccacactcccggccaagtcccaggactcagccccagccaaccagatggaaggc
tacctgcaccgcaaacacgagtgggagggtcacaacaagaaggcatccaacagatcctgg
cacaatgtgtattgcgtgatcaacaaccgggagatgggcttctacaaagatcataagagt
gccagccaggggatcccttaccacaaccagatccccatcagcctgaaggatgctgcgtgt
gaggtcgccctcgactacaagaagaagaagcatgtgttcaaactgaaagctacagatggc
aatgagtatctcttccaagccaacgaggatgaggagatgaactcgtggatgcaagccatc
tccagcgctgcgtcctctgataagacagagatgacccccagcagccacagcacccccgcc
tccagccgagcccagaccctgcctgcctccgtcgccctggcaactgagtccagccctggc
aagcgtgagaaggacaaagaaaagcgcttcagccttttcagcaaaaagaaatag
DBGET
integrated database retrieval system
