Oncorhynchus masou masou (cherry salmon): 135511172
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Entry
135511172 CDS
T10723
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1a-like isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
135511172
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omm04040
]
135511172
Ion channels [BR:
omm04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
135511172
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
135511172
NCBI-ProteinID:
XP_064788841
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Position
23:complement(62683212..63067057)
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AA seq
1151 aa
AA seq
DB search
MLAEADATVTHGSGNSMMSRNNYFNKNPDSSISMSKMDVIIPFSPDVPCDNNGQRMWWAF
LASSMVTFFGGLFIILLWRTLKYLWTVCCHCNIKKKEAQKVNNPANSQAADSTAKGPDEK
DEVVPASEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALGIYFIDSSDPIESCQ
NFYKDFTLQIDMFFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRS
WLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDP
WENFQNSQSLSYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEI
IELIGNRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNIS
PNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCPDPDAEDASNIM
RVISIKNYSPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKAGFIAQSCLAQG
LSTMLANLFSMRSFIEIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPAVCELCYVKLK
LLLIAIENKSEQGESSILINPGNHVKMQEGTLGFFIASDAKEVKRAFFYCKACHDDITDP
KRIKKCGCKRLEDEHPSTLSPKKKQRNGGMRNSPNNSPNMMSRHDPLLIPGNEQMENMDM
NLKQYDSTGMFHWCPSKEIEKVILTRSEASMTVLSGHVVVCIFGDVTSALVGLRNLVMPL
RASNFHYHELKPIVFVGSLEYLRREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCV
ILSANQNNIDDASLQDKECILASLNIKSMQFDDSIGLLQANSQGFTPPGMDRSSPDSSPV
HGLARQASVTTGANIPIITELVNDSNVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLD
SLMSATYFNDNILTLIRTLVTGGATPELEALLAEENALQGGYSTPQTLANRDRCRVAQLA
LYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLATPSQCTKRYVITNPPYEF
ELVPTDLIFCLMQFDHNAGQSRTSLSHSSHSSHSSSKKSSSVHSIPTTNRQNRSSKAREA
GHKQKKEMVYR
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgctagctgaggcggacgccaccgttacccatggaagcggcaactctatgatgagtaga
aataactattttaacaaaaatccggactcctcgatctctatgtccaagatggacgtgatc
atccccttctcgccagacgtgccctgcgacaacaatggccagcgcatgtggtgggcattc
ctcgcctcctccatggtcacgtttttcggaggtctcttcatcattctcctgtggaggacc
ctcaaatacctgtggaccgtctgctgccactgtaacatcaaaaagaaggaggcccagaag
gtaaataaccctgctaacagtcaggcagcagacagtacagctaagggtcctgatgagaag
gacgaagtggtccctgccagcgaggtgggctggatgacctccgttaaggactgggccggg
gtcatgatatcagcacagacactcaccggcagagtcctggttgtgctagttttcgctctc
agcattggagcacttggaatatactttatagattcttctgatcccatagaatcctgtcag
aatttctacaaagatttcacgttacagatcgacatgttcttcaatgtcttcttcctcctc
tactttggcttgcggttcatagcagccaatgataagctgtggttctggctggaggtcaac
tcagttgtggacttcttcactgttcctcctgtcttcgtatctgtctacttgaacaggagc
tggctgggtttaagattcctgagagccttgagattgatacagttctctgaaattttacag
tttttgaatatcttaaaaacaagcaattccatcaagctggtgaacctgtgttccatcttc
ataagcacatggctaacagctgccggattcatacatttggtggaaaactcaggggatcct
tgggaaaactttcaaaattcccagtcactttcctactgggaatgtgtctacttgctcatg
gtcactatgtcaacagtgggctacggggacgtctatgcaaaaaccaccctgggtcgcctg
ttcatggtcttcttcatcctcgggggtttggccatgtttgccagctacgtccctgaaatc
atagagttaataggaaaccgcaagaaatatggtggttcctatagtgcggttaatgggaga
aagcacattgtggtttgtggtcatattacactcgaaagtgtctccaacttcctcaaagac
ttcctacacaaggacagggatgatgtcaatgtagaaattgtttttctccataatatttcc
cctaatcttgagctggaagccttgttcaaacggcactttacccaggtagagttctaccag
ggttctgttctcaaccctcacgatctggccagagtgaagattgagtcagcagacgcctgt
ctgattctggctaataagtactgcccagatcccgatgctgaagacgcctccaacatcatg
agggtcatctctatcaagaactattcccccaagatacgaattatcactcagatgttacaa
taccataacaaggctcacctgctcaacattcctagctggaactggaaggagggggatgat
gctatctgtctagcagagctgaaggctggcttcatagctcagagctgtctggcccagggt
ctctccaccatgctggccaacctcttctccatgaggtccttcatcgagattgaagaggac
acatggcagaagtactatttagaaggggtagctaatgagatgtacacagagtatctgtcc
agtgcctttgtggggctctccttcccagcagtctgcgagctgtgctacgtgaagctgaag
ctgttgcttatcgccatcgagaacaagtcggagcagggagagagcagcatcctcatcaac
ccggggaaccacgtaaagatgcaggaaggaactctggggttcttcatcgccagtgatgcc
aaagaagtaaagagagcatttttctactgcaaagcttgtcacgatgacatcacagacccc
aaacggatcaaaaagtgtggctgcaaacgacttgaagacgagcacccgtcaactctgtcg
cccaaaaaaaagcagcggaacggaggcatgcgaaactcacccaacaactcccccaacatg
atgagcaggcatgaccctctactaatccctgggaacgagcagatggagaacatggacatg
aacttgaagcagtatgactccacaggaatgttccactggtgtccgtctaaagagatcgag
aaggtcatcctgacccggagtgaggcatccatgacggtgttgagcggccatgtggtggtc
tgtatatttggagatgtcacgtccgctctagtggggctgcgaaacttggtgatgcctttg
agagccagcaacttccattatcacgagctgaagcccatagtgtttgtgggctcgctggag
tacctgaggagagagtgggaaactctacacaacttccccaaggtctccatactacctggt
acgccattaagccgtgcagatttaagggctgtcaacatcaacctctgcgacatgtgcgtg
atactgtcggccaatcagaacaatatcgacgacgcctcgctgcaggataaggaatgcatt
ctggcgtcgctcaacataaagtctatgcagtttgacgacagcatcgggctcttgcaggct
aactcccaaggtttcacgcctcctggaatggaccggtcctctccagacagcagtccagta
catggtttagcacgccaggcctccgtcaccaccggcgccaacatccccatcatcactgaa
ctcgtgaacgactccaacgttcagttcttggaccaagatgatgacgacgacccggacaca
gagctgtacctgacgcagcccttcgcctgtggaaccgccttcgctgtcagcgtgctggac
tctctcatgagtgcaacatacttcaacgataatatcctcaccctgatccggacgctggtg
actgggggagccaccccagagctagaggctctactggctgaggagaacgccctgcaaggg
ggctacagcacgccacagacactggccaaccgagacaggtgtcgtgttgcccaactggcc
ctgtacgatgggccctttgctgacttgggggatggtggttgctatggagatttgttctgt
aaagcattgaagacatacaacatgttgtgcttcggaatctacagattgagagacgctcac
cttgccacacctagccagtgtaccaaacggtatgtgattaccaaccctccgtatgagttt
gagttggtccccacagacctgatcttctgtctgatgcagtttgaccacaacgcgggccag
tctcggaccagcctttcccacagctcccactcctcccattcctccagcaaaaagagctcg
tccgtccactccatccccaccaccaaccgccagaaccgcagcagcaaggctcgggaggct
ggccacaaacagaaaaaggaaatggtttacagatga
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