Oncorhynchus masou masou (cherry salmon): 135511360
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Entry
135511360 CDS
T10723
Name
(RefSeq) LOW QUALITY PROTEIN: apoptotic chromatin condensation inducer in the nucleus-like
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03013
Nucleocytoplasmic transport
omm03015
mRNA surveillance pathway
omm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135511360
09122 Translation
03013 Nucleocytoplasmic transport
135511360
03015 mRNA surveillance pathway
135511360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135511360
03041 Spliceosome [BR:
omm03041
]
135511360
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
135511360
Spliceosome [BR:
omm03041
]
Complex C
Other components
EJC/TREX
135511360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
135511360
NCBI-ProteinID:
XP_064788973
LinkDB
All DBs
Position
3:17180055..17208860
Genome browser
AA seq
2009 aa
AA seq
DB search
MADHEDVKLDGRPLQSLRVADLKAALEERGLPKSGQKNTLVKRLKGALMLENLQRTSHHH
IRLQPNSQIGEEMSQNSFIKQYLAKQQELLRQRLEREAREAVEDDDTDKEDHTQDNNSAA
CAAPDQDVAPVLVDQHKLFGLSEGKGRAGPARAGEGHMSRDGHVSLPPAPTSAAVSSLAV
RVAVDEQRPERVPTSSQVPADSDDDGADEDWDSGARSRNLGEPPRGQLARERSGGSRQHP
QHIPLLSPQLRQPTPPPSPPPELSFPLPDTPKQSPPSPGEPPARQRTSSTSSSGSSSSGS
CRSSPDPQSNTERKPGPLTLLARKMASEGAFSGVGWHGRGDAERQDNNAATATMSSGRGP
QEGTVFAITHTTNAAASLPFPRLVPVANQGALEGHLPHSEVPVSVLRPTIMEERAAAWPQ
ENNKEKELQAESEREKSPEQERLGAVEQERLERQRIFEQEHAVEQEGERALERERKEREK
ALARERKEREKALSREKALEQERKERALAQERAQGLEREEEERAKALAKEREEREKAMQL
ETQRAMEEALESEREEKALESEREEKALESEREEKALESEREEKALESEREEKALESERE
EKALESEREEKALESEREEKALESEREEKALESEREAKALESEREAKALESEREAKALES
EREAKALESEREAKALESEREAKALESEREAKALESERRRXALESEREAKALEREREAKA
LEREREEKALESEREEEEKALEREREERVKVLKQERQKALEREMKEKEEKVRALDQEIIE
REKALEKERTMEKEREERERALEQEKVQQREKEEALEQEKALQREKEERERALEQEKALH
REKEEKESALEQEKALQREERERALEQEKALQREKEERERALEQEKALHREKEEKESALE
QEKALQREERERALEQEKALHREKEERESALEQEKALQREERERALEQEKALHREKEEKE
RALEQEKALQRERERALEQEKALHREKEEKERALEQEKALHREKEEKERALEQEKALQRE
RERALEQEKALHREKEEKERALEQEKALHREKEEKERALEQEKALHREKVERERALEQDK
SSQREKEERESRLPPWKRSREFGLTPLPTPPLSTGAGKMAATEEGGEPKVPSLPQKALRD
NRPPESGTPLSQSLATSLSPQSSFKKFRFLRDPIVLSQSSASGVIKRPRTFSESPHPQSL
ALQSPSKPGEPEQEGTQQGAQPSAWQAAPKKPASQGVPVSGTDTLGTTGPERETPVIATL
GKSPEEEKGKSLVSEEHVQAHRGEMAREANALSGPAGAVLPPSPQPVEGKVEKGRERSQK
KEEKLGRLSSSSNDSLDSDSGSSSSGSSGSSSSQGKTHTTPSGRRPEKPQTNTISQDTET
VSQPEDPTEAPKAPQHKKRVSGEEEEDINIDGARHRKKPFLGIHAGEDNGQKDSEGEAVK
TDTTSARPVGENQHHPRQRTVECQGEVNEAAMAEPKKAPESSEECVTPKAFTARRISLSS
SKASPGAVTAEGETESVAGRKRRWGSSTAVTTKKSSMSITTDSLKSLIPDIRLCPGQEMV
VDLHPGEDHLSGVEEEGRERGEQDLKIRRTVTQVVPSVTQENGQKESKRSEHEEEDREDG
REVKGDREEKMDGSFQRDSMETQCPSPPSHDMEMKTVTPSDKLIRRSISQQKSGVSITID
DPVRTAKQPSPPRGKVSNIVHVSNLVRPFTLSQLKELLGRTGTVHEDGFWIDKIKSHCYV
TYSSAEESIATRAALHGVKWPQSNPKFLSLDFIQQEELDFHRGLPPPERAGEGERGAAAV
PGRGAVLPPLLPEREQWAEREREMEHRERTRAEREWDRDKVRDFGPEKPGEEAVPRRSRS
RERKRKERKMDKKEKAADEPPVKLLDELFKKTKAAPCIYWLPLTEEQFSQKETARQERMK
EREKRRKEQQEELEKKREEDRKEKMKAASAASGERGEGERYRERERDWGRDGESDKHRED
CYRRPGGSSAGGARRSRSRSDPPPRDRRR
NT seq
6030 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccacgaagacgttaaactggacgggaggccgctacaatcacttcgcgtggcg
gatttgaaagctgctttagaggagcgcggacttcccaaaagcggacagaaaaatactctc
gttaagagactcaaaggggctctcatgctggagaacctccagagaacctcacaccatcac
ataagactgcagccaaactcccagattggtgaagagatgagccagaacagcttcataaag
cagtatttggcaaaacagcaggagctcttgaggcagcgtctggagagagaggcccgggaa
gcagttgaagatgatgatacagacaaagaggaccacacacaggacaataacagcgctgcc
tgtgctgccccagaccaggatgtcgcacccgtgttggttgaccagcacaaactttttggc
ctctccgagggaaagggacgagcaggcccagcaagagcgggagaggggcacatgtccaga
gatggccatgtgtctcttccacctgcccctacctctgctgctgtttcctctctggctgtg
cgtgtagctgttgacgagcagagaccagagagagtcccaacctctagtcaagtcccagca
gatagtgatgatgatggcgctgatgaggactgggatagcggtgccaggagtaggaatcta
ggagagccaccaagaggccaactagcaagagaaaggtctggaggatcccgccaacaccca
cagcacattcccctattgtctccgcagcttcgacagcctacccctcctccctcccctccc
ccagagttatcattcccactgcctgatacccctaaacaaagcccccctagtccaggtgag
cccccagctaggcagcgtacttccagtacctccagctctggctcgtctagcagtggcagt
tgtcgtagcagcccagatccacaaagcaatacagagcgcaagcctggcccactgaccctg
ctggcacgcaaaatggcatcagagggggctttctctggagttgggtggcatgggcgtgga
gatgcagagaggcaggacaacaatgctgcaactgcaacaatgtcttctggtagaggtcct
caagagggcacagtgtttgccatcacccacacaaccaatgctgcagccagtttgcccttc
cccagactggttccagtagcaaaccagggagctcttgaaggccatctcccccacagtgaa
gttcctgtgagtgtgcttaggcccactattatggaagagagagctgctgcatggccacaa
gaaaacaacaaggaaaaggagctgcaggcagagagtgaaagagaaaaatcccctgagcaa
gagcgacttggtgccgtggagcaggaaagactggagaggcagagaatatttgaacaagag
catgctgtggagcaagagggggaaagagctttggagcgagagaggaaggagagagagaaa
gctttggcacgagagcggaaggagagggagaaggctttgtcgcgagagaaagctttggag
caagaaaggaaggagcgggctttggcgcaagagagggcgcaaggtcttgaacgagaagag
gaggaaagagcgaaagctttggcaaaagagagggaagagcgagagaaagcaatgcaatta
gaaacgcagagagccatggaggaagctttggagagcgagagggaggagaaggctttggag
agcgagagggaggagaaggctttggagagcgagagggaggagaaggctttggagagcgag
agggaggagaaggctttggagagcgagagggaggagaaggctttggagagcgagagggag
gagaaggctttggagagcgagagggaggagaaggctttggagagcgagagggaggagaag
gctttggagagcgagagggaggagaaggctttggagagcgagagggaggcgaaggctttg
gagagcgagagggaggcgaaggctttggagagcgagagggaggcgaaggctttggagagc
gagagggaggcgaaggctttggagagcgagagggaggcgaaggctttggagagcgagagg
gaggcgaaggctttggagagcgagagggaggcgaaggctttggagagcgagaggaggcga
naggctttggagagcgagagggaggcgaaggctttggagagggagagggaggcgaaggct
ttggagagggagagggaggagaaggctttggagagcgagagggaggaggaggagaaggct
ttggagagagagagggaggagagggtaaaggttttgaagcaagagcggcagaaagctttg
gaacgggagatgaaggagaaagaggagaaggtgagggctttggatcaagaaataattgaa
agggagaaagcccttgagaaagaaagaaccatggagaaagaaagagaggagagggaaaga
gccttagaacaggagaaagtccagcagagagaaaaagaggaggctttggaacaggagaag
gccttgcagagagagaaagaggagagggagagagctttggaacaggagaaggctttgcac
agagagaaagaggagaaggagagcgctttggaacaggagaaggccttgcagagagaggag
agggagagagctttggaacaggagaaggccttgcagagagagaaagaggagagggagaga
gctttggaacaggagaaggctttgcacagagagaaagaggagaaggagagcgctttggaa
caggagaaggccttgcagagagaggagagggagagagctttggaacaggagaaggccttg
cacagagagaaagaggagagggagagcgctttggaacaggagaaggccttgcagagagag
gagagggagagagctttggaacaggagaaggccttgcacagagagaaagaggagaaggag
agagctttggaacaggagaaggccttgcagagagagagggagagagctttggaacaggag
aaggccttgcacagagagaaagaggagaaggagagagctttggaacaggagaaggccttg
cacagagagaaagaggagaaggagagagctttggaacaggagaaggccttgcagagagag
agggagagagctttggaacaggagaaggccttgcacagagagaaagaggagaaggagaga
gctttggaacaggagaaggccttgcacagagagaaagaggagaaggagagagctttggaa
caggagaaggccttgcacagagagaaagtggagagggagagagctttggaacaggacaag
tcctcgcagagagagaaagaggagagggagagtcgtcttcctccatggaagcgtagtcgt
gagtttggtcttacccccctgcctactcctcccctctccacaggagcaggtaagatggcg
gcaacagaggagggtggggagcccaaagtgccatccctaccccaaaaagcattaagagac
aacaggccacctgaatctggtacgcccctgtcacaatctctagcaacgtctctgtcaccc
cagtcctccttcaagaagttccgtttcttgagagaccccatagttctatcccagtcttct
gcatccggggtcatcaagaggccccgtacattctctgaaagcccccatcctcagtcctta
gctctccagtcccccagcaaacctggggaaccagagcaggaaggtactcagcagggggcc
cagccttctgcctggcaagcagcaccaaagaagcctgcaagtcagggggtccctgtttct
ggaacagacacgttggggacgacagggccagagagggagaccccagtgattgccacactg
ggcaagagtcctgaagaagaaaagggtaagagcctggtctcagaggagcatgtccaagca
catagaggggagatggccagagaagcaaacgccctctcaggtccagcgggagctgtgcta
cctccctcaccccaaccagtggaaggcaaggtagaaaaaggaagggagagaagtcaaaag
aaagaagaaaagctgggaagactgtcttcctcgtcaaatgactccttagattctgactct
gggtcgtcgtcctcaggttcgtctggttcatcatcatcccagggcaaaacacacaccact
cccagtggtagaaggcctgagaaacctcagacaaacaccatatcccaggatacggaaacg
gtgagtcaacctgaggatccaactgaggccccaaaagccccacagcataaaaagcgagta
tctggggaggaggaagaggacataaacattgatggagccagacacaggaagaaaccattc
cttggaatacatgcaggagaagacaatgggcagaaggacagcgagggagaggcggtaaag
acagatactacaagtgctcgaccagtcggcgaaaaccagcatcacccacgacagaggacg
gttgaatgtcaaggggaggtgaatgaggctgccatggctgagcctaagaaggctcctgag
agcagtgaggagtgtgtgacaccaaaagcattcacagcccgtaggatctcccttagcagc
agcaaggcctctccaggtgctgtcactgcagagggcgaaacagagtctgtggctgggagg
aagaggcgatggggatccagcactgcagtcacaaccaagaaatcatccatgagcatcacc
acagactctctgaagtctctgatcccagacatcagactgtgtccaggccaggagatggtg
gtggatctgcacccaggggaggatcacctctctggggtggaggaggagggaagggagcgg
ggtgagcaggacctcaagatcagacgcacagtcacacaggtggtcccgtcagtgacccag
gagaatggacagaaggagtccaagaggagtgaacacgaggaggaagaccgagaagatgga
agggaggttaaaggagacagagaggagaagatggatggctcattccagagagactccatg
gagacacaatgcccctctccccccagccatgacatggagatgaaaacagtgacccccagt
gacaaattgatccgtcgctccatcagccagcagaagtctggcgtgtccatcaccatagac
gaccctgtccgcacggccaagcagccctctcctccacgaggcaaagtgtccaacatcgtc
cacgtgtccaacctggttcgtccgttcaccctgagccagctgaaggagctgctcggtagg
accggcaccgtgcacgaggacggtttctggatcgacaagatcaaatctcactgctacgtc
acatactccagtgcagaggagtcaattgccactcgtgcagccctgcatggggtgaaatgg
cctcaaagcaaccccaagttcctcagtctggacttcattcagcaggaggagctggatttc
cacagaggcctgcctccccctgagagagctggggagggtgagcggggggctgcggcggtg
cctggtcggggggcggtcctgcctcctctcctgcccgaacgggaacagtgggcggagcga
gagcgtgagatggagcacagggagaggacccgggctgagagggagtgggacagggacaag
gtccgggactttggtccagaaaaacctggagaggaagcggtccccagacgatcccgctcc
agagagcggaaacgcaaggagaggaagatggacaagaaagagaaagctgcagatgaacct
cctgtcaaactgctggatgaactgttcaagaaaaccaaagcagccccttgtatatactgg
ctccccctcacagaagagcagttttcacagaaggagacagctcgacaagagcggatgaag
gagcgagagaagaggaggaaggagcagcaagaggagttggagaagaaaagggaggaagat
cgcaaagaaaagatgaaagccgcgagtgctgcatctggagaaagaggcgagggggagcgg
tacagagagcgagagagagactggggcagagatggagagagtgacaaacacagagaagac
tgctaccgccgacctgggggcagcagtgcagggggagccagacgctcccgcagccgcagt
gaccccccacctcgtgacagacgacgctag
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integrated database retrieval system
