Oncorhynchus masou masou (cherry salmon): 135511431
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Entry
135511431 CDS
T10723
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 8-like
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
135511431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omm03036
]
135511431
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
135511431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
HDA2-3
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
135511431
NCBI-ProteinID:
XP_064789012
LinkDB
All DBs
Position
3:17305464..17332246
Genome browser
AA seq
2577 aa
AA seq
DB search
MADPIMDLFDDTPLFNLDALPDDAFTDPVEEALKLALGQVDPPSEPTPDLSTPALSIPVA
APTIPDPVPVQQLAPVPVALPQTVSIATTVPQTTLSVASNTSGAATVLLSSPLTVNSSTG
TTQQFTTQQLTQIAQQLTPQQLAAITQQAGGQGGAKIVILKGPGGQAQLLQTVAGTGSQA
GKVTFARVLSGTQLRPGMQILSGGTVLNQGSPGQGQVKVGTGVQRLVQSPNGPLKQVQLI
SIPQGQSQSQTQTVQVQIPQAQLTQAQAQVQLQTQGQATQIQLQPQTQVQLQSAMQTQVT
AAATGTTTVRPQGVTLTTVPQQGEAKRITLVLQQPQGGAAQGGAVTVGGSGQLQQGQQQR
LVLGNLPGKLVLQGGQLAALTQARAGQTGTQPKVLTIQLQVQQQPNQQGGPKFQLVSGGQ
GSSPQVVQISQGQGGQRLAVPLKLLLQPQTNATSTAGRAVSVVKVINTSAAGSAASTTTT
MSSPGIRLAKAQEPVRRLETLCKQEKANRIVAEAIARAKARGERNIPRVLNQDELPAGQK
AADQGAAATTTGTPGAKKKGGGSKKKSPAAAAGKGGTGAEKKGKAKAAGGAAGGTPGAAG
TGCSKSKSKAKINTITLVGGKKRKRNASSDHSDGELSPASPSKALDEDMLAKRRSNRQVK
RKKYTEDLDIKITDDEDEPEEDVDVTTTTAAVASITGGAMGQLMGEQLKQELQLDGDSLS
SMQFFVENPNEEDAAIVDKVLSMRLTKKEVSPGHYINAEEFFVKYKNYSYMHCEWATLEQ
LERDKRIHQKLKRFKAKHAQMRHLLQEEEEPFNPDYVEVDRILDESNSVDNGEPVVYYLV
KWCSLPYEDATWELREDVDEGKVEEFRKIQDRQPQLKRTPRPQAAAWKKLEEFREYKSGN
VLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSISLLSEVFGAGVQGPFLVIAPLS
TITNWEREFATWTDMNAIVYHGSLASRQMIQQYEMYCKDDKDHLIPGAYKFDALITTFEM
ILSDCPELREISWRCVIIDEAHRLKNRNCKLLDSLKMLDLEHKVLLTGTPLQNTVEELFS
LLHFLEPAQFSSESEFLRDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETII
EVELTDVQKKYYRAILERNFSFLSMGATSNSNVPNLLNTMMELRKCCNHPYLITGAEEKI
VAELRDVYNPVAPDFHLQALVRSAGKLVLLDKLLPRLKAGGHKVLIFSQMVRCLDILEDY
LINKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCVIFD
SDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMLDKASLKLGLDRAVLQSMSGN
KESNVNGQIQQFSKKEIEDLLRKGAYAAIMDEEDEGSKFCEEDIDQILQRRATTITIESE
GKGSTFSKASFVATENRTDIALDDPEFWQKWAKRADIDFDSMNRKNTLVIDTPRVRKQTR
QFATLRGEGGEISDPDSDDEYPPANSRQSRSSRRSERHTGNGYGRTDCFRVEKHLLVYGW
GRWRDILSHARCKRRLGERDVETICRVILVFCLLHYRGDENIKSFIWELITPPENGREPH
TLLNHSGLSIPVPRGRKGKRVKAQSSFDVQKVEWIRKYNPDSLLLDDSYRKHLKHQCNKV
LLRVRMLYYLRQEVIGEHADSVLRGADARDIDIWMPEMEQLEVPSGWWDTEADRSLLVGV
FKHGYEMYTTMRADDCLCFLERAGRPDDQAIDAEQHSADAELGDGGDDDKYSEDPEFKPA
LRHTKDLYEEADSLNMDDDICVEDKALPVKAKGPPSGQSGACEWPTSSSLTARLRRLITA
YQRSYRREQLKVEAAEKGDRRRRRCEQASKLKEIARQERQQRWTRREECDFYRVVSTFGV
EQIKKEADTPEGEEAELEWARFRTFARLEKKTDESLSRYFRCFMAMCRRVCNLRPASGED
PSELGQSLAPITEERASRTLYRISLLRRLREHVLPHPSLEELLLLAPPSSELPAWWSTPA
HDRELMLGSALHGVSRTELSVFLDPQFSFSQARHDYLENQQNQPAPATPLLQPQAEEGSV
VKEEEGLDKESRILGASEALGHSNTQITHLSRPDGKGRARTGLGWKKSRGRGPRSGGNKG
ERSVGGISDSDSDSGSSTSSQRSGSSDDSGDSETERERAALKMEEDGENSLLSMTPSQDG
APPESLTDPFRVDWPKDRVLINRLDSLCTLVLSGQWPTGRRYVSDAQLNPGSDDLGAVDE
LSFARLMRKGNSTPGGEGADGRESEFTVKLLKEEGLKLTFSKHALMSNGSGGEGSGRRKR
REQELSDPDGAVPVVDAMTGTVLSGERAPRRRDLPNWLKENPDYEVEGDMLELLVNQKRR
RRKKRTEKTAALLGSEKVKIIDMRTGKKIGATYGPMLQDLSEFLEENPDCAVAPEWAEMV
QSSGFLPESLFHRLLSARSVIPKRVRRHHHHHVPQPAPLEDPVLGGGVEETLVSDGAYMM
EDEDLENSPFLTQAFDVKMEGGDSLSQGGYESSDREALLDDVIMAQKDSDSSSSSED
NT seq
7734 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccccatcatggacctctttgatgacacgccactgtttaacctggatgccctg
ccagacgatgccttcacagaccctgtggaggaggctctgaaactggctctggggcaggtg
gaccccccctctgaaccaaccccagacctctccaccccagcgctcagcataccagtggca
gctccaaccatcccagacccagtacctgtgcagcagctggccccagtcccggttgccctc
cctcagactgtttcaatagctacaacagtacctcagacaacactttctgtagccagtaac
accagtggggctgccacagtcctgctgagctcacctctgactgtcaatagctctactggc
accacacaacaattcaccacacagcagcttacacagatcgcacagcagcttactcctcag
cagctagctgccatcacccagcaggccggaggccagggaggtgccaagattgtcatcctg
aaaggacctggggggcaagcacagttgctgcagactgttgctgggacaggctcccaagcg
gggaaggtcacctttgccagggtactgtctggaacccaactcaggcccggcatgcagata
ctgtctggaggaacggtcctgaaccaagggtctcctgggcagggacaggtgaaggtggga
actggggtacagaggctggttcagtcgcccaacggacccctgaagcaggtacagttgatc
tccattcctcagggccagtcccaaagccagactcagactgtccaggtgcagataccgcaa
gcccagcttacccaagcccaggctcaagtgcagctccagacccaaggacaggcaacgcaa
atccagctacagccccagacacaggtgcagctgcagtctgccatgcagacacaggtcact
gctgctgctacaggcaccactacagtccgaccacaaggggtcaccctcactacagtacca
caacagggtgaagccaagaggatcaccctggtgctgcagcagcctcaggggggtgcggcc
caggggggtgctgtgacagtcggtgggtcgggtcagctgcagcagggccagcagcagagg
ctggtgttgggtaatctcccagggaagctggtcctccaggggggtcagctggctgctctc
acccaggcaagggcagggcagacggggacacagcctaaagtgctcaccatccagctgcaa
gtgcagcagcaacccaaccaacaggggggacccaagtttcagctggtgtccggagggcaa
ggtagtagcccacaggttgttcagatctcccagggtcaaggtggacagagactagccgtg
cccctcaaactgctgctgcaaccacagacaaatgccacctcgacagcaggcagagctgtc
tccgtagtgaaggtcatcaacacctcagctgctggctccgccgcttccaccaccaccact
atgtcgtcaccagggatacggctagccaaggcccaggagcctgtacgtcgtttggagacc
ctgtgcaagcaggagaaggccaaccgtattgtggctgaggccattgccagggccaaggcc
cggggagagaggaacattccacgagtcctcaaccaggacgaactgcctgctggacaaaag
gctgctgaccaaggggcagctgcaacgaccactggcacacctggagccaagaagaaggga
ggagggagtaagaagaagagcccagcggcggcagcagggaagggcgggactggtgcagaa
aagaagggcaaagccaaggcagcaggtggggctgctggtgggacaccaggagcggctgga
accggctgcagcaagagcaaaagcaaggcaaagatcaatacaatcactctagtggggggt
aagaagaggaagaggaatgcctcctcagaccattctgatggggagttgagccccgcctct
ccctctaaggccctggatgaggacatgcttgcgaagagacgttccaaccgtcaggtgaag
aggaagaaatacactgaggatctggacatcaaaatcactgacgacgaggacgaaccggag
gaggacgtggacgtaaccaccacgacggcggcggtggcgtccattaccggaggagcaatg
gggcagctgatgggagagcagctcaaacaggagctgcagttggacggggacagcctttcc
agcatgcagttctttgtggaaaaccccaatgaggaagatgcagcaattgttgacaaagtt
ttgtccatgaggttaactaaaaaggaggtgtctccaggacattacatcaatgctgaggaa
ttttttgtcaaatataagaactactcctacatgcactgtgagtgggccactctggagcag
ctggagagagacaagaggatccatcagaagctcaagagattcaaggccaaacatgcacag
atgagacacctcttacaggaggaagaggagcccttcaacccagattatgtggaggtggac
cggatcctggatgagtccaacagtgtggacaatggagagccggtggtgtattacctggtg
aagtggtgctctctgccctatgaagatgctacctgggagctaagagaggatgtggacgag
ggcaaggtggaggagttcagaaagatccaagaccgccaacctcaactcaagagaacgccc
cgaccccaagcagctgcatggaagaagctggaggaattcagagagtataagagtgggaac
gtactccgagaataccagctagaaggagtcaactggctgctcttcaactggtacaacagg
cagaactgtatcctggcagatgagatgggtctagggaagaccatccagtccatctctctg
ctgtccgaggtatttggtgctggggtccagggccccttcctggtcatcgctcctctctct
accatcaccaactgggagagggagtttgccacctggactgacatgaacgccatcgtctac
cacggcagcctggccagcaggcagatgatccagcagtacgagatgtactgcaaggatgac
aaggatcatctgatcccaggggcatataagtttgatgccttgatcaccacgtttgagatg
attctgtccgactgccctgagctgagggagatctcctggcggtgtgtgatcattgacgag
gctcaccgcctcaagaaccgcaactgcaagctgctggacagtctcaagatgctggacttg
gagcataaggtgcttctaactggtacccccctccagaacacagtggaggaactcttcagt
ctgctgcacttcctggagccagctcagttttcatcagagtctgaattccttcgtgacttt
ggagacctcaaaacagaggagcaggtccagaagctccaggccattctgaagcctatgatg
ctgcgcagactcaaagaggacgtggagaagaacttggcgccaaaacaggagaccatcatt
gaggtggagctgacagatgtccagaagaaatactaccgagccatcctagagaggaacttc
agtttcctcagcatgggagccaccagcaacagcaacgtgcccaatctgctcaacaccatg
atggagctacgcaagtgttgcaaccacccctaccttattactggggcagaggagaagatt
gtggctgagctgagggatgtttacaaccccgtggccccagactttcacctgcaggcgctg
gtgagatccgcaggcaagctggtcctactggacaaactgcttcctcgcttgaaggccggg
ggacacaaggtgctcatcttctcccagatggtgcgctgcctggacatcctggaggactac
ctcatcaacaagagatacctgtatgagcgtattgatggcagagtgagagggaacctgcgt
caggcagccattgaccgcttcagcaaaccagactcggaccgtttcgtcttcctgttgtgt
acacgggctggaggtctgggcatcaacctaactgctgctgacacctgcgtcatctttgac
tcagactggaaccctcaaaacgacctgcaggctcaggcgcggtgtcaccgtatcggccag
tccaaggcggtgaaggtgtaccgtttgatcaccaggaactcttatgagagggagatgcta
gacaaggccagcctcaaactgggtttggaccgggctgtactgcagagcatgagcggtaac
aaggagagcaatgtcaacggacaaatccagcagttctccaagaaggagatcgaggacctc
ctgaggaagggggcgtacgctgccattatggacgaggaggacgagggctccaagttctgt
gaggaggacattgaccagatcctccaaaggagagccaccaccatcaccattgagagcgag
ggcaagggctccaccttctccaaggccagcttcgtggctaccgagaacaggaccgacatt
gccctggatgaccccgagttctggcagaagtgggccaagagggcagacatagactttgat
tccatgaacaggaagaacactctggtgattgacacgcccagggtgaggaagcagacccgt
cagtttgccaccctgaggggtgagggtggggagatatctgaccccgatagcgacgacgag
tacccgcccgccaattcccggcagtcccggtcctccaggcgctccgagcgccacaccgga
aacggctacggccgcaccgactgcttccgtgtagagaaacatctgcttgtttacgggtgg
gggcgctggagggacatcctgtctcatgcacgctgtaagcggcgcctcggggagcgagac
gtggagacgatctgcagggtcatcctggtcttctgcctgcttcattaccgtggagacgag
aacattaagagcttcatctgggagctcatcaccccgccagagaacggccgggaaccccac
acactcctcaaccactctggtttgtccatccctgttcctcggggcaggaaggggaagaga
gtgaaggctcagagctcttttgatgttcagaaggtggagtggatccgcaagtacaacccc
gactccctgcttctggatgacagctaccgcaaacatctcaagcaccagtgcaacaaggtg
ttgctgagagtacgtatgctgtactacctgagacaggaagttattggagaacatgctgat
tctgtgctgagaggagctgatgccagggatattgacatctggatgcctgagatggagcag
cttgaggtgccgtcaggttggtgggatacagaggcagaccgctccctcctcgtcggagtt
ttcaaacatgggtatgagatgtacactactatgcgtgccgacgactgtctctgtttcctg
gagagagctggtcgccctgacgaccaagccattgatgctgagcagcactctgcagacgca
gagctgggagacggaggagacgatgacaagtattctgaagacccggagttcaagcctgcg
ttaaggcacaccaaagacctatacgaggaggctgactccttgaacatggatgatgatatc
tgtgttgaggacaaggcattgcctgttaaagccaaggggccgccctctggccagtccgga
gcctgtgagtggccgaccagctcatcacttaccgcgcggctccgtcgtctaatcacggca
taccagcgcagctacaggagagagcagctgaaggtggaggcagcagagaagggcgaccgt
aggcgcaggaggtgtgagcaggccagtaaactgaaggagattgcacgccaggaacgccaa
cagaggtggacccgtagagaggagtgtgacttctaccgtgtggtgtccacattcggtgtg
gagcaaataaagaaagaggcagataccccagagggggaagaggctgaactggaatgggct
cgcttccggacatttgcccgtctagaaaagaagactgacgagagtctgagccgctacttc
cgctgcttcatggctatgtgccggagggtgtgcaacctgcggcccgcctccggagaagac
ccttcagagctgggccagtctctggccccaatcactgaggagcgagcctctcgcaccctg
taccgcatcagcctgctgcgccgtctccgtgagcacgtcctgcctcacccttccctggag
gagctcctcctgctggccccgcccagctccgagctgcctgcctggtggagcactccagcc
catgaccgggagctcatgctgggttccgccctccatggcgtcagccgcactgagctctcg
gtcttccttgacccgcagttctcattcagccaggcccgccacgactacctcgagaaccag
cagaaccagcctgcccccgccactcccctcctccaaccacaggcagaggagggctcagtc
gtcaaagaagaggagggtctggacaaggagtcccgcatccttggagcctctgaggctctc
ggccactcaaatacccagatcacacacctctcccgtcctgatgggaagggccgagcccgg
accggcttgggatggaagaagagcagggggagagggccgagaagtggaggaaataaagga
gaaagaagtgtaggagggatttccgattccgactctgattctggctcgtctacctcctcc
cagcgatcaggcagctctgacgacagtggcgacagtgaaacagagagggaaagagctgct
ttgaagatggaggaagatggggaaaacagcttgctctcaatgactccatctcaagatggt
gcgccaccagagtcccttactgacccattcagggttgattggcccaaggaccgtgtgttg
ataaaccggctggacagcctctgtaccctggtgctgtctgggcagtggccaacagggcgg
cgctatgtttctgatgcccagctcaacccaggctctgacgacctaggggcagtggatgag
ctcagctttgcacggctcatgcggaaaggcaacagcacgcccggtggagaaggagcagac
ggacgggaatctgagttcaccgtcaaactcctgaaggaggaggggctgaagctgaccttc
tctaagcatgccttgatgtccaatgggtcagggggagaggggagcggacgcaggaagcgt
agggaacaagaattgtcagatccagatggagcagtcccggtggtcgatgccatgacgggc
acagtgctgagtggggagcgagcccctcgccgcagagacctgcctaactggctgaaagag
aacccagactatgaggtggagggagacatgttggagctccttgtgaaccagaagaggagg
aggaggaagaagaggactgagaagaccgcagcactgttgggcagtgagaaggttaagatc
attgatatgaggacaggaaagaagattggggctacgtatggacctatgctgcaggatctg
agtgagtttctggaggagaaccctgactgtgcagtggcaccagaatgggctgagatggtc
cagagctctggctttctgccagaaagcctcttccaccggctcctctctgcacgctctgtc
atccccaagagagtccgccgccaccaccaccaccatgtccctcagcctgccccgctggag
gacccagtcctgggcggaggtgtagaagagaccctggtctcagacggggcctacatgatg
gaggacgaagacttggagaattcccctttcctgactcaagcttttgatgttaagatggaa
ggaggcgacagcttgtcacaaggcggatacgagagttctgacagggaggcccttttggac
gacgtcatcatggctcagaaggactcagactcttcctccagctcagaggattga
DBGET
integrated database retrieval system
