Oncorhynchus masou masou (cherry salmon): 135511456
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Entry
135511456 CDS
T10723
Symbol
si:dkey-110c1.10
Name
(RefSeq) unconventional myosin-Vb
KO
K10357
myosin V
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04814
Motor proteins
Brite
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
135511456 (si:dkey-110c1.10)
mRNA cycle factors
P-body specific factors
135511456 (si:dkey-110c1.10)
Membrane trafficking [BR:
omm04131
]
Others
Actin-binding proteins
Myosins
135511456 (si:dkey-110c1.10)
Mitochondrial biogenesis [BR:
omm03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
135511456 (si:dkey-110c1.10)
Cytoskeleton proteins [BR:
omm04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
135511456 (si:dkey-110c1.10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135511456
NCBI-ProteinID:
XP_064789030
LinkDB
All DBs
Position
24:complement(80471574..80518634)
Genome browser
AA seq
1681 aa
AA seq
DB search
MELYAKGASVWVPDPEAVWVSAKLLKDYNLGDENVVLQISDGREVQYPVVPPSGLPPLAN
PDILEGENDLTALSFLHEPAVLHNLRVRFLDYSSIYTYCGIVLVALNPYDQLPIYGEEVI
DAYSGQDMADMEPHIFSVAEEAYRTMTREEKNQSIIISGESGAGKTVSAKFTMRYFAVVG
GAAQQTSVEERVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFGRKGGIIGANMRTYLL
EKSRVVFQASQERNYHIFYQLCASRDLPEMRVLKLGGAETFRYTNQGGEDSMQIPGTDDV
VDLERTRNAFTILGVPPDQQMELFRILAAVLHLGNVNIQASGRGGDRSYIDGEEHSLSVF
SKLLGVERTQMAHWLCHRRLTVGGEMLVKPMPGQQSLEARDALAKHVYGQLFTWTVTRLN
SALRAQSEKPKSFIGVLDIYGFETFERNSFEQFCINYANEKLQQQFNRHVFQLEQEEYVR
EELPWSRIEFSDNQPCIALIEGQLGLLDLLDEECRMPKGSEESWARKLYDQHQSNNPSPH
FRKPRMSNTAFIILHFADMVQYECDGFLDKNRDTVFEEPINILRASQSELVSELFQQKPA
GGSLSLSEGKSSLPNGSLRSGPGMRAQREHKLTVGFQFRQSLQLLMDTLNSTTPHYIRCI
KPNDLKEPFMFDPKRAVQQLRACGVLETIRISAAGYPSRWTYAEFFSRYRVLLRGGGVQT
QEQIQASGQRALPELIPDPEQYCFGKTKVFFRAGQVALLERLRAERLRAAGVIIQSWVRG
WLGRRRYIKTRWATLTIQRYTRGALARRLADLLRYTKAALIIQKTYRMVAIRQMFLMIRE
ATVTIQAFTRGSLARRQYRRVVAERAAVLLQSAVRGWLARLAYRRVRAAIVLMQCCVRRR
AARRELLKLKTEARSVEKFRELNKGMEVKLMQLQLRADQKARESGALRETLQAERKAHNI
ELDTLRGALVKLEYQLETQLQTQQSQPSTAITEEETEERRRAEKKAAQEILRLTQEVQAL
QVERDCLGKEKEDLTTRLLEQETAQEESVVQAVAQEGKALTAELDEERRKYQGLLREFTR
LEQRYENLREMSMLTEHSKGYRRTDSNQSLIMEPPSPSPMSPPFSGPPTFPATPSFFGLP
PFPSPEEVRRVSVTSPTAERRAWLSSDTLMDTLMENMGVAKDSAGKMTGEDLWHAYDAVR
VANKFLENQLRSQRSQEEAELEALRLQAKRTCSDPSPSADQQYLVELVEAREQEVCRLRR
ELKELRHTVTLRRLLAQTGPVLAQSTEHSSAPHAKAGTVTGLLECRKRDEAKLMKTLITD
VRVDSALSLPPGLAASVLFLCVRQADCSGDEIRARSLCTAAVTAMKGALKKHCNDVDMTA
LWLKNACLLSDLLTQHSKQDEDLVPLTSDLSELNRALSALCIQAYQQLLSISETRLQPII
VPAMLESEMIPGLSGSGVKLGNFRKRAGSDPRAVERNTGETPSMAAVLRELSALHTALSR
QALPPTLMEQAFRQLTHLLSASALNSLLLRKDMCSWSRGLQIRYNVSLLEEWLRSRGLQA
GGAVALLEPLIQAAQLLQVGKKTEADAQALVHTCTALSTQQIVKILTLYTPHSDLEERVT
LNFIRTVQGLLKERSGGQPPQLLMDVRRVFPVTFPYLLPPPVRADQLDIPDSLKISFLRR
P
NT seq
5046 nt
NT seq
+upstream
nt +downstream
nt
atggagttgtacgccaagggtgccagtgtgtgggtacctgacccagaggcagtgtgggta
tcagccaagctcctcaaggactacaaccttggagatgagaatgtggtgctgcagatcagc
gatggcagggaggtgcagtacccagtggtgccaccctctggcctcccccctctggcgaac
cctgatattctggagggggagaatgacctcactgctctcagcttcctgcacgagcctgct
gttctacacaacctgagagtccgattcctggactacagcagcatctacacctactgtggg
attgtgttggtggccctcaacccatatgaccagctgcccatctatggagaggaagtgatc
gatgcctacagtgggcaggacatggctgacatggagcctcacatcttctctgtggcagaa
gaggcctaccgcaccatgaccagggaggagaagaaccagtccattataatcagtggggaa
tctggagcagggaaaacagtctctgctaagttcaccatgcgctactttgctgtggtgggg
ggagcagcccagcagaccagtgtggaggagagagtactggcctccaaccccatcatggag
tccattgggaatgctaagactacacgcaatgacaacagtagccggtttgggaagtacatt
gagatcggcttcggacggaaggggggcatcattggggccaacatgaggacgtacctgctg
gagaagtctcgagtcgtcttccaggcgtcacaggagagaaactaccacatcttctaccag
ctgtgtgcttctagagacctgccagagatgagagtcctcaaactgggtggtgccgaaacg
ttccgctacacgaaccaaggaggggaagattccatgcagatcccaggcactgatgatgta
gtagatctggagcgcactcgcaatgctttcaccattctaggtgtgcctccggaccagcag
atggagctcttcaggatccttgcagctgttctgcacctgggcaatgtcaacatccaggcc
agtgggagaggtggtgatcgaagttacattgatggggaggagcattccctgtcggtgttc
tccaagctgctgggggtggagaggacccagatggcccactggctgtgccaccgcaggctg
acagtagggggagagatgctggtcaagcccatgcctggtcagcagtccctagaggcccgg
gatgccctggccaagcatgtgtacggtcagctgttcacctggacggtgacccggctcaac
tcagcccttcgagcccagagcgagaagcccaagtcatttattggggtgctggacatctat
gggtttgagacatttgaaaggaacagttttgaacagttctgtataaattacgccaatgag
aaattgcagcagcaattcaacaggcacgtgttccagttggagcaggaggagtatgtccgt
gaggagctgccgtggagcaggatagagttcagtgataaccagccgtgcatcgctctcatc
gagggacagctgggcctgctcgacctgctggatgaggagtgcaggatgcccaaaggttca
gaggagagttgggctaggaagctgtatgatcagcatcagagtaacaaccccagtccacac
ttccgcaaacctcgaatgtccaacactgccttcatcatcctgcactttgctgacatggtc
caatatgaatgcgatgggtttttagacaagaaccgggatacagtttttgaggaacccatc
aacatcctaagagccagtcagtctgagctggtgtctgagctgttccagcaaaagccagca
gggggcagtctgtccctctcagaggggaagtcctctctgcccaatggcagtctgcgctct
ggccctgggatgagagctcagcgggaacacaaactcactgtgggcttccagttccgtcag
tctctgcagctgctgatggacactctgaacagcaccacccctcactacatccgctgtatt
aagcccaatgacctcaaagagccttttatgtttgaccctaaaagggccgtccagcagctg
cgagcctgcggggtgctagagaccatacgcatcagtgctgcaggctacccatccaggtgg
acctacgcagagttcttcagccggtaccgggtgctgttgcgcgggggtggggttcagact
caggaacagatccaggcgtcgggccagagggccctgccggagctcattccagacccggag
cagtattgctttgggaagaccaaggtgttcttccgtgctgggcaggtggctctgctggag
aggctgagggcagagagactgagggcggccggggtgatcatccagagctgggtcagaggc
tggctgggccgcaggcgatacatcaagacacgctgggcaacactcaccatccagagatac
acaagaggagccctggctaggcggctggcagaccttctgcgctacaccaaggcagcgctg
atcatccagaagacataccgtatggtggcgataagacagatgtttctgatgatccgcgag
gccaccgtcaccatccaagctttcaccaggggctcgctggcacgacgccaatacagacgg
gtggtggcagagcgggctgcggtgttgctccagtctgcagtgcgtggctggctggcccgc
cttgcttacaggagggtgagggccgccatagtgttgatgcagtgttgtgtgaggcggcgg
gctgccaggagggagctgctgaagctgaagacagaggctcgctcggtggagaagttcaga
gaactcaacaagggcatggaggtcaaactgatgcagctgcagctcagggccgaccagaag
gccagggagagcggtgctctgagagagaccctccaggcggagcgtaaggcccacaacatt
gagctggacaccctgcggggggcgctagttaagctggagtaccagttagagacccagctc
cagactcagcagtctcagcccagcaccgccatcacagaggaggagacggaggagaggagg
agggcagagaagaaagcagcccaggagatcctacgactcacacaggaggtgcaggccctg
caggttgagagggactgtttggggaaagagaaggaggatctgaccacccgattactggag
caggagacagctcaggaggagagtgtagtacaggctgtggcccaggaaggtaaagctctg
acagcagagctggatgaggagaggaggaagtaccagggtctgctcagagagttcaccagg
ctggagcagagatacgaaaacctacgggaaatgagcatgctcactgagcactctaagggc
tacagacggacagattcaaaccaaagcctgatcatggagcccccatcgccttccccgatg
tcgccgcccttttctgggccccctaccttcccagccacaccttccttcttcggcctccct
ccctttccctctccggaggaggtgaggagggttagtgtgacgtcccccaccgcagagagg
agggcctggcttagctctgacacactcatggacactttgatggagaatatgggtgtggct
aaagactcagccgggaagatgaccggagaagacctgtggcacgcctatgatgctgtacga
gtggccaacaagttcctggagaaccagctgcgtagccagcgctctcaggaggaggcagag
ctggaggctctgcggctgcaggctaaacggacgtgctctgatccctccccctctgcagac
cagcagtacctggtggaactggtggaagccagggagcaggaggtctgcagactgaggaga
gaactgaaggagctgagacacacagtcacactcagaagactactggcacagacaggccca
gtgctggcccagtccacagagcattcctctgccccccatgccaaagctgggactgtcaca
gggctgctggagtgtaggaagagggatgaggccaagctcatgaagaccctcatcacagac
gtgagggtggacagtgccctctccctgccccctggcctggctgctagtgtgctgttcctg
tgtgtacgccaggcagactgtagcggagacgaaatccgcgcccgttctctctgcactgct
gctgtcactgcaatgaagggggctctgaaaaaacactgtaatgatgtggacatgacagca
ctgtggctgaaaaatgcctgccttctcagtgacctactgacccagcactccaaacaggat
gaggatttggttccgttgacctctgacctgagtgagttaaaccgtgctctgagtgccctc
tgtatccaggcctatcagcagctcctgtccatctcagaaacccgcttgcagcccatcatt
gttcctgccatgctggagagtgagatgatcccaggactgtctgggtcgggggtgaagctg
gggaactttaggaagcgtgcggggtctgatcccagggccgtagagaggaatacaggggag
acccctagtatggctgcggtgctgagggagctgagtgccctccacacggccctgtcccgc
caggccctaccccccaccctgatggagcaggccttccgtcagctcacccacctcctttct
gcctctgccctcaacagcctgctgctacgcaaggacatgtgtagctggagccgcggcttg
cagatacggtataatgtgagtctgctggaggaatggctgcggagccgtgggctgcaggca
gggggagctgtggccctgttggagcctctcatccaggccgctcagctcctgcaagtgggc
aagaagacagaagctgacgcacaggccctcgttcacacctgcactgccctgtctacccag
cagattgtgaagattctgaccctgtacacccctcacagtgacctagaggagagggtgaca
ctcaattttatccgcacagtgcagggtctgctgaaggagcgttcaggcggtcagcctcca
cagctgctgatggatgtacggcgtgtgttccccgtcaccttcccctacctgctgcccccg
cctgtccgcgctgaccagctggacatcccagactccctcaaaatctccttcctacgacgg
ccttag
DBGET
integrated database retrieval system
