Oncorhynchus masou masou (cherry salmon): 135511723
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Entry
135511723 CDS
T10723
Symbol
lingo3a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3a
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135511723 (lingo3a)
Membrane trafficking [BR:
omm04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
135511723 (lingo3a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
Ig_2
LRR_LRWD1
Cupin_1
LRR_6
LRRNT
LRR_9
V-set
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
135511723
NCBI-ProteinID:
XP_064789269
LinkDB
All DBs
Position
24:complement(80812953..80814773)
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AA seq
606 aa
AA seq
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MAACPGMGWPGLLLLLMTTVASTQSQGCPQRCECMAKLKSVACQGKRLSALPDSISSDTR
LLDMSGNMLRWVEHGDLLSYPRLEELDLSENIISVLEPNAFSSLQNLRVLSLRGNQLKLV
PMGAFSRLTNLTTLDLSGNKIVILLDFTFQDLKSLRNLEVGDNDLVYISNKAFLGLVGLR
ELTIERCNLTSISSQSLSYLRSLVTLRLRYLSISSLDDQNFRKLGGLRGLEIDHWPFLEH
ISPHSLQGLNLSWLSITNTNITSVPTAALRSLAHLTSLNLSYNPISVLESWALRDLVRLK
ELHLVNTNLMTVQPYALGGLRQIRLLNLSTNALVTLEEGAFQSVNTLETLRVDGNPLSCD
CRLLWILQRRKTLNFEGKSPVCAGPMEVQGRALSAFSDSALFDHFTCQKPKIRNRKLQPV
TAREGQVVSFVCRAEGEPTPIIFWVSPQRRRITTKSTGRVIVLPEGTLEIRYAQVTDSGT
YICIASNAGGNATYFATLTVSALPLDAALMANRTYYTGDLNETNLNDTKVFLKFTLDLKT
ILISTAMGCCLFLGVVVFCFLMLFAWSRGRGQHKNNFSVEYSFRKVDGPAASGGQGGARK
FNMKMI
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcagcctgtccaggcatggggtggcctggcctgctcctgctgctgatgactactgtg
gcctccactcagagccaaggctgtccccagcgctgtgagtgcatggccaagctcaagtct
gtggcctgccaaggcaagcgcctgtctgccctccccgacagcatctcctcggacacacgc
ctgctggacatgagtgggaacatgcttcgctgggtggagcatggcgacctcctctcctac
cctcggctggaggagctagacctgagtgagaacataatcagtgtcctggagcccaacgcc
ttctctagcttgcagaacctgagggtgctgtcgctgagggggaaccagctcaaactggtc
cccatgggcgccttctcacgcctcaccaacctcaccacactagacctgagtgggaacaag
atcgtcatcctgttggacttcactttccaggatctaaagagcctgaggaacctggaggtt
ggcgacaacgacctggtctacatctccaacaaggccttcctgggcctggtgggtctgagg
gagctcaccattgagaggtgcaacctgacctccatctccagccagtctctctcctacctc
cgcagcctggtcactctgcgcctgcgctacctcagcatctcctccctggatgaccagaac
ttccgtaagctgggcgggctgcggggtctggagatcgaccattggcccttcctggaacac
atctccccccacagcctccagggcctcaacctgtcttggctgtccatcaccaacactaac
atcacctctgtgcccacagccgccctacgcagcctggcccacctcaccagcctcaatctc
tcctacaatcccatctcagtgctggagtcctgggcccttagggacctggtccggctgaag
gagctacacctggtcaacaccaacctgatgacggtgcagccgtacgccctcggtggcctt
cggcagatccgcctgcttaacctgtccactaacgccctggtaaccctggaggagggcgcc
ttccagtctgtcaacaccctggagacgctgcgtgtagatgggaaccctctgtcctgtgac
tgccgcctgctctggatcctccagcgcaggaagaccctcaactttgaagggaagtcccca
gtgtgtgcgggacccatggaggtgcagggcagggccctcagtgccttctcagactctgcc
ctctttgaccactttacctgccagaagcccaagatacgcaacaggaagctgcagcctgtg
actgccagggagggccaggtagtgtcctttgtgtgccgggcggagggtgaacccacacct
atcatcttctgggtatctccccagcgccgtcggatcactaccaagagcactggacgtgtc
atcgtcctacctgagggaacgctggagatccgctacgcccaggtgactgacagcggcacc
tacatctgcatcgccagcaatgccgggggtaacgccacctactttgccacgctgaccgtg
agcgcgctgcctctggacgcagcgctcatggccaaccgcacatactacacaggtgacctc
aacgagaccaatctgaacgacaccaaggtcttcctcaagttcaccttggacctcaagaca
atcctgatatccacagccatggggtgttgcttgttccttggggtggtggtcttctgtttc
ctgatgctgttcgcatggagccggggccgggggcagcacaagaataacttctcagtagag
tactccttcagaaaggtagatggccctgctgccagtggcggacagggaggggcccgtaag
ttcaacatgaagatgatttga
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