Oncorhynchus masou masou (cherry salmon): 135511791
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Entry
135511791 CDS
T10723
Name
(RefSeq) DNA topoisomerase 3-beta-1-like
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03440
Homologous recombination
omm03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
135511791
03460 Fanconi anemia pathway
135511791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
omm03032
]
135511791
03400 DNA repair and recombination proteins [BR:
omm03400
]
135511791
Enzymes [BR:
omm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
135511791
DNA replication proteins [BR:
omm03032
]
Eukaryotic type
DNA Topoisomerases
135511791
DNA repair and recombination proteins [BR:
omm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
135511791
FA (Fanconi anemia) pathway
135511791
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_TOP3B
Motif
Other DBs
NCBI-GeneID:
135511791
NCBI-ProteinID:
XP_064789363
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Position
1:complement(7786191..7807096)
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AA seq
649 aa
AA seq
DB search
MKTVLMVAEKPSLAQSIAKILSKGSCSSRKGLNGACSVHEYMGTFSGQSVRFKMTSVCGH
VMSLDFIGKYNNWDKVDPAELFTKAPTEKKEANPKLNMVKFLQVEGKGCDYVVLWLDCDK
EGENICFEVLDAIEPVMNRPYGSERTVYRAKFSSITDTDIWAAMNKLGEPNRNEALSVDA
RQELDLRIGCAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETY
WVIQAKVFKGKESPLTLDWDRVRVFDREVGQMFVNMTKTSREAKVESVSKKEKAKQRPLA
LNTVEMLRVASSSLGMGPQHTMQIAERLYTQGYISYPRTETNHYHDNFDLKGTLRQQANN
PFWAQEVKALLSEGLNRPRKGADAGDHPPITPMRAASEGELGSDGWRLYEYIVRHFIATV
SQDCKYLQTTISFTIASEGFSCSGKTLISPGFTEVMPWLGIPLEEAMPVCERGDVFTVEE
IKLVERQTSPPDYLTEADLITLMEKHGIGTDASIPVHINNISQRNYVTVENGRKLKPTNL
GIVLVHGYYKTDAELVLPTIRGAVEKQLNLIAQGKANYQQVLQHTLDIFKRKFHYFFDTI
ASMDELMEVTFSPIAATGKPLSRCGKCHRFMKYIQVSVTKQKDTGSTPI
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgaagacagttttgatggtggcggagaagccgtcgctggctcagtcaattgccaaaatc
ctatctaaaggcagctgctccagtcgcaaaggtctcaacggagcatgttcggtccacgag
tacatgggcactttctcaggccagagcgtgcgctttaagatgacatcggtgtgtgggcac
gtgatgagtctggatttcatagggaagtataataactgggacaaggtggatccagctgaa
ctcttcactaaagcccctactgagaagaaggaggccaaccccaaactcaacatggtcaag
ttcctacaggttgaaggcaagggatgtgactacgtggttttgtggttggactgtgacaaa
gagggagagaacatctgctttgaggtcctggacgccattgagccggtgatgaaccgtcca
tacggcagtgaacggaccgtctaccgagccaagttcagctccatcaccgacacagacatc
tgggcagccatgaataagctgggagagcccaaccgtaacgaggctctgtccgtagacgcc
cggcaggagctggacctgcgcattggctgtgcattcacccggttccagaccaagtacttc
cagggtaaatatggtaacctggactcatccctgatctcctttgggccatgtcagaccccc
acactgggcttctgtgtggagcgccacgacaagatccagtccttcaaaccagagacctac
tgggtcatacaggctaaggttttcaaagggaaagagtctccactgactctggactgggac
agggtgagggtctttgacagagaggtgggacagatgtttgtcaacatgactaagacctcc
agagaggccaaggtggagtcggtgagtaagaaggagaaggccaagcagagacctcttgcc
ttgaacactgtggaaatgcttcgagtggccagctcctctctaggaatgggtccacagcac
accatgcagatagcagagcgtctgtacacccagggttatatcagctacccccgtactgag
accaaccactaccacgacaactttgacctgaaggggacactcagacagcaggctaacaac
cccttctgggcccaggaggtgaaggctctgctgtcagagggactgaaccgtcccaggaaa
ggagcggacgcaggagatcaccctcccatcacccccatgagggctgcctccgaaggagag
ctaggaagtgacgggtggcgtctgtatgagtacattgtgcgtcacttcatcgccacggtg
agccaggactgtaagtacctgcagacaaccatctccttcaccatcgcctccgagggtttc
tcctgcagtggcaagacactcatatcgcctggctttacggaggtgatgccgtggctgggt
atccctctagaagaggccatgccagtgtgtgagaggggagatgtcttcacagtggaggag
attaaactagtggagaggcagaccagccctccagattaccttactgaggccgacctcatc
acactgatggagaaacacggcataggtactgacgctagtatcccggtccatatcaacaac
atctctcagaggaactatgtgacggtggagaacggacgcaagctcaaacccaccaacctg
ggcatcgtcctggtgcatggatattacaagacagatgctgagctggtgctgcctaccatc
cgtggtgcggtagagaaacagctgaacctgattgctcagggcaaggccaactaccaacag
gttctgcaacacacactggacatcttcaagaggaagttccactacttctttgacaccatc
gctagtatggacgagctcatggaggtgacgttctctcccatcgctgccactggcaagccc
ctgtctcgctgcggcaagtgccatcgcttcatgaagtacattcaggtcagtgttacaaaa
caaaaggacactgggtcaacccccatctga
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