Oncorhynchus masou masou (cherry salmon): 135511945
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Entry
135511945 CDS
T10723
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42-like isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
omm01002
]
135511945
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135511945
Enzymes [BR:
omm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
135511945
Peptidases and inhibitors [BR:
omm01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
135511945
Ubiquitin system [BR:
omm04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
135511945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
135511945
NCBI-ProteinID:
XP_064789550
LinkDB
All DBs
Position
24:complement(26479688..26560905)
Genome browser
AA seq
1405 aa
AA seq
DB search
MTIVDRSSEKSDLESVGCKRSGSLNFPGGDGNGMDSGCSSWGSGGPSSSDTPRVKTGGCM
GPTPGATVNSSSADRPKEQVVLTSGDGIALPQKVLFPAERLSLKWNQVHRIGSGLQNLGN
TCFLNSALQCLTYTAPLTNYMLSREHSKTCHEPGFCMMCTMQNHITQVFANSGNVIKPIG
VLNELKRIAKHFRFGSQEDAHEFLRYTVDAMQKSCLPLNKLDRQTQATSFIHQVFGGYLR
SRVKCFNCKAVSDTFDPYLDVALEIKTAPSITKALEQFVKPEQLDGENAYRCAKCKKMVP
ASKRFTIHRSANVLTISLKRFANYNGGKIAKDVRYAECLDLRPFMSQSHGEPQVYALYAV
LVHSGFSCHAGHYYCYVKASNGQWYQLNDSSVLVSDIRSVLNQQAYVLFYIRSPDLKNGG
DYNHTCRTPGPLSQLSPRPILTPRVNIGPRHTSTGFIGPQLPPHMAKNIFHVNGNGSLRD
YPSGSKPSTSSDNSMGNTSYSPLATSSSHPLNRPTGIPDPAKRQKLSFFIGQGKQIRPSS
SSYAQPSSSSQSTSDMSTPRDPRINGTPAVNRNGRGASFLVPYGQESSEESDQEGGSGLG
NGTAKPHVNGRKGETVYGPVPRVLTLKTNGIGNGQATIHRNGTNSFSKLSQNGHHNIKHP
EKIHGNGHAMSPGLGSSMSNGAEAHHSGPSKEVHCTTPSQASTSQGLHSADIDSRLSLTP
EKKAKTHSGPLPRHAPSTAAKPPSTLADVGAKPLTDALRESSSNPGVLFLQPTPRSLSTP
VLSGPGLGATKDLGAPHRGSGEDVRETQNSPAVGLYGQPSSRDGRDQMYSSDREETGGLN
SSDREETGGLNPSDREETGGLNPSDREETGGLNPSDREETGGLNPSDREETGGLNPSDRE
ETGGLDPSDREETGGLDSSDREETGGLDSSDREETGGLDSSDREETGGLDSSDREEKGGL
DSSDREEKGGLDSSNREEKGGLDSSDREEKGGLDSSDREEKGGLDSSDREEKGGLDSSDR
EEKGGLDSSDREEKGGLDSSDREEKGGLDSSDREEKGGLNSSDRDRDRLYSSERDKDGEG
DRYHRDRSRERNRDHDSDHYRHRRDHRDRDHHRSYRDRSLSRDRHRNWESEAFLSQRRYH
PRERDRDRCHHHYHHRTSKDRKRDRREHSHHSHPHREEPHGRSRWRDEGKERCYYPSQET
PLPTPLSSSTKPSQSLPVLSPALVKRPEPHREERKDSSEECRAKKPKKKKSKDRERHREN
RTFDVNSSDRAADGSSSSKHNKSRRYDTDTEDEKSGGEIHSTQSPEGHRDPNAPREGRRA
SSSDDERASKKRRYQDDGYDNSYPKKRHRADDNDRSFSSRDGSPTAAPQNASHCHFNDLT
GNDLGQPNGNSHECSTSGLYNDLRQ
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacagatcttcagagaaatctgacctagagtcagtcgggtgcaagcgc
tcaggatcgctgaactttcccggcggtgacgggaacgggatggacagtggctgctccagc
tgggggtcggggggcccctcgtcctccgacacccccagggtgaagacagggggctgcatg
ggtcccacccctggagccacagtcaacagcagcagtgcagacaggcccaaggagcaagtg
gtgctgaccagtggggacggcatcgccctgccccagaaggtgctgttcccagccgagcgg
ctcagcctgaagtggaaccaggtccaccgcatcggatcaggtctccagaacctgggaaac
acctgcttcctcaactcggctctgcagtgtctcacctataccgctcccctcactaactac
atgctgtcccgggagcactctaaaacatgtcatgagcctgggttctgtatgatgtgcaca
atgcagaatcacatcacccaggtcttcgccaactctgggaatgtcatcaagcccatcgga
gtcctcaacgagctcaaacggattgcaaagcatttccgctttggcagccaagaggacgcc
catgagttcctgcggtacacagtggacgctatgcaaaagtcctgcctgcctctaaacaaa
ttggacaggcaaacgcaagcaaccagtttcatccatcaagtctttggagggtatctacgg
tccagagtaaaatgtttcaactgcaaagcggtctctgacacgtttgacccttatttggat
gttgctttggaaataaagactgcccccagtatcacaaaggctctggagcagtttgttaag
cctgagcagctagatggagagaatgcctacagatgcgctaagtgtaagaagatggttcca
gcctctaagagattcaccatccaccgcagcgctaatgtgctcaccatctcactgaagcga
ttcgccaactacaacgggggcaagatcgctaaggacgtaaggtatgctgagtgcctagac
ctgcgtcccttcatgtctcagtcccacggcgagccccaggtctacgcgctctatgctgtc
ctggtgcactctggcttcagctgccacgctggacactactactgctacgtcaaagctagc
aatggccagtggtaccagttgaatgactcctctgtgttggtcagtgacatcaggtcagtc
ctcaaccagcaggcttacgttctcttctacatcaggtcacctgatctgaagaatggaggg
gactacaatcacacgtgccggaccccggggcccctcagccagttgtccccccgccccatc
ctcacaccccgggtcaacattgggccacgacacaccagcactggcttcatagggccacag
ctgcccccacacatggccaagaacatctttcatgtcaatgggaacggctcgctaagggac
tacccctctggctctaagcccagcaccagcagtgacaacagcatgggcaacactagttac
agcccgctcgccacctcttcctcccatcctctcaaccgtcctacaggcatccctgaccct
gccaagcgccagaagctctccttctttatcggtcagggcaaacagatccgcccttcatca
tcctcttatgcacagccgtcctcttcgtcacagtctacatcagacatgtctacgccccgg
gatcctcgcattaatggcactcccgccgttaacagaaacggtcgcggagcgtctttcctg
gtgccgtacggccaggagtcgtctgaggagtcggaccaggagggaggcagtggtctgggg
aacggcaccgcaaagcctcacgttaacgggaggaagggagagaccgtctacggccccgtc
cctagagtgctgaccctcaagaccaacggcatcggtaatggccaggctaccatacaccgt
aacgggaccaacagcttctccaaactcagtcagaacggacaccacaacatcaaacaccct
gagaagatccacggcaacggtcatgcgatgtcgcccggtttgggttccagcatgtctaat
ggggcggaggctcaccacagtggcccaagcaaagaggtgcattgcaccacacccagccag
gccagcacctctcaaggcctgcacagtgccgacatcgacagccgcctctccctcacccca
gagaaaaaggctaaaactcactctggccccctccctcgccacgcaccatcaaccgctgct
aaacctccatccacattggctgatgttggagctaaaccacttaccgacgccttgagggaa
tccagctccaaccctggggtcttattcctccagcccaccccccgctccctcagtacccca
gtcctctccggaccaggcctgggagccacaaaagatctcggagccccacacaggggatct
ggggaggacgtcagggagacccagaacagcccagctgtagggctgtatggacagcccagc
tccagagatggaagagaccagatgtactcttccgatcgggaggagacaggcgggttgaac
tcttccgatcgggaggagacaggcgggttgaacccttccgatcgggaggagacaggcggg
ttgaacccttccgatcgggaggagacaggcgggttgaacccttccgatcgggaggagaca
ggcgggttgaacccttccgatcgggaggagacaggcgggttgaacccttccgatcgggag
gagacaggcgggttggacccttccgatcgggaggagacaggcgggttggactcttccgat
cgggaggagacaggcgggttggactcttccgatcgggaggagacaggcgggttggactct
tccgatcgggaggagacaggcgggttggactcttccgatcgggaggagaaaggcgggttg
gactcttccgatcgggaggagaaaggcgggttggactcttccaatcgggaggagaaaggc
gggttggactcttccgatcgggaggagaaaggcgggttggactcttccgatcgggaggag
aaaggcgggttggactcttccgatcgggaggagaaaggcgggttggactcttccgatcgg
gaggagaaaggcgggttggactcttccgatcgggaggagaaaggcgggttggactcttcc
gatcgggaggagaaaggcgggttggactcttccgatcgggaggagaaaggcgggttgaac
tcttccgatcgggatcgagaccggctgtactcttctgaacgggataaagacggagaaggg
gataggtaccaccgagacaggagccgtgaacgcaaccgggaccatgactcagaccactac
cggcaccggcgagaccaccgagacagagaccaccaccggtcgtaccgggaccgctcgctc
agccgggacagacaccggaactgggagtctgaggcattcctctcacagcgacgctatcac
cccagagagagggacagggaccgctgtcaccaccattaccaccacagaacgagtaaggac
aggaagagggacaggagggagcacagccaccacagccacccacacagagaggagcctcat
ggacgctcaaggtggagggatgaaggtaaagaaaggtgttactacccttcacaggagacc
cctctgcccaccccactgagctccagcactaagcccagtcagtccctcccagtcctttcc
ccagccctggtgaaacgacccgagcctcacagagaggagagaaaggacagctctgaggag
tgtcgggccaagaaacccaagaagaagaagtccaaggacagagagaggcaccgagagaat
aggacctttgacgtgaattcctctgacagggcagccgacggcagcagttcctccaaacac
aacaaaagtaggaggtacgacactgacacggaggatgagaaatcagggggtgagatccac
tctacccagagtcccgaggggcaccgtgaccccaatgccccccgggagggtcgcagggca
agcagcagcgacgatgagagggcgagcaagaagcgacgttaccaggacgatggctatgac
aacagctaccctaagaaacgccatcgcgccgatgacaacgaccgctccttctcctctcgt
gatggatcaccaacagcagctcctcaaaacgcatcgcactgccacttcaacgacctcaca
ggtaatgacttaggtcaacccaatggaaactcccacgaatgttctaccagtggactgtac
aatgaccttagacagtag
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integrated database retrieval system
