KEGG   Oncorhynchus masou masou (cherry salmon): 135512015
Entry
135512015         CDS       T10723                                 
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC5-like isoform X1
  KO
K14721  DNA-directed RNA polymerase III subunit RPC5
Organism
omm  Oncorhynchus masou masou (cherry salmon)
Pathway
omm03020  RNA polymerase
omm04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:omm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    135512015
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    135512015
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:omm03021]
    135512015
Transcription machinery [BR:omm03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Pol III specific subunits
     135512015
SSDB
Motif
Pfam: RPC5 RPC5_C
Other DBs
NCBI-GeneID: 135512015
NCBI-ProteinID: XP_064789671
LinkDB
Position
24:29427501..29452101
AA seq 705 aa
MTSPPPLTMASGEDDDPVIQEIDVYLAKSLADKLYLFQYPVRPSSMTYDDITHLSAKIKP
KQQKVELEIAINTLSPNYCRSKGEQIALNVDGTTSEDSNTYSVKMMDKQTFTSIQSTTNT
SRYAAAIFRKGELHITPLQGILQMRPSFSYLDKADCKHREREAANEGGDSSQDEADEDVK
AVTVRFSRPESEQARQRRIQSYDFLQKKQAEESWVHLHYHGLNDGRSDHERLYLYCQAMG
GSENTELVKTPKEYLAMLMPPVAEEKIVRPVGPSNMLSMAQLRTLPLGDQIKTLMKNVKV
MPFANLMGLLTPGTDSTAVLRCIQQVALLVQGNWVVKSDVLYPKNSCSPHSGVPAEVLCR
GRDFVMWRFTQDRSVMRKEIAAIIKLPPEDVKDFLEHMAVPRINRGWEFLLPSDCSFIKK
HPDVAQRQHMLWMGIQSKLEKVFTFSKEDLVSKKDLETETVHVSGEQRLKAAHERARHNQ
PSLEKDLSARRQGGAGASGGTGVRVKEEPVSEDEPMDSCSSVHPNGLVNGYPSSSATCPT
LNPHNGHGGTPTPSPSPELRDFVWNTFRKQHVLTLSEVKRLFNLHLASLPPGHSLFHSIS
DRLLQDTILMSQCKQILVPFPAQSTAAADEQKVFVLWETGETFDKHRQVLYEIFMKNYRV
RRNVIQTRLTQELGDQTTKADMDRLLKECCVSLGGMWYLKGTLQS
NT seq 2118 nt   +upstreamnt  +downstreamnt
atgacatctccccctcccctcaccatggccagcggggaggacgatgaccccgtcatacaa
gagattgatgtatacctggccaaaagccttgcggacaagctctatctgttccagtatcca
gtacgcccttcctctatgacctatgatgatatcactcatctgtctgccaagatcaagccc
aagcagcagaaggtggagttggagatagccatcaacactctgagtcctaactactgtcga
agtaaaggcgagcagatcgccctcaatgtggatggaaccacctcagaggactccaacacc
tactctgtgaagatgatggacaagcagacgttcacatccatccagtccacgaccaacacc
tccagatacgctgctgccatcttcaggaaaggtgagctccacatcacgccgctgcagggc
atcctccagatgcgacccagcttctcctatctggacaaggctgactgcaaacacagagag
cgggaggccgctaacgaggggggagactcctctcaggatgaggcagatgaagatgtcaag
gctgtcactgtgaggttttcccgtcctgagtcggagcaggctcgtcagaggcgtatccag
tcatatgacttccttcagaaaaaacaggcagaggaatcctgggtccacctgcactaccac
ggcctcaatgacgggcgttcggaccacgagaggctatacctgtactgccaggctatggga
ggttccgaaaacacagaactggtgaaaactccaaaggagtacctggcaatgctcatgcct
cctgtcgcagaggagaagattgtgaggcccgtaggtcccagtaacatgctgtccatggcc
cagctccggacgctgccgctcggtgaccagatcaagaccctgatgaagaacgttaaggtg
atgccgtttgccaacctgatgggtttgctgacccctgggacagactccactgcagtgctg
cgctgcatccagcaggtggcgctactggtgcagggaaactgggtggtcaaaagtgacgtg
ctgtatcctaagaacagctgtagtccccacagtggtgtgcctgctgaggtgctgtgtcga
ggaagagactttgtgatgtggagattcactcaggatcgctcggtgatgaggaaggagatt
gcagccatcatcaagctccccccggaggatgtgaaggacttcctggaacatatggcggtg
cctcgtatcaaccgtggctgggagttcctgttgccaagcgactgttccttcatcaagaag
caccctgacgtggcccagcggcagcacatgctgtggatggggatacagagcaaattggag
aaggtcttcaccttctctaaggaggacctggtatccaaaaaggacctagaaacagaaact
gtgcacgtgagtggcgagcagcggctgaaggctgcccatgaacgtgcaaggcataaccag
ccctctctagagaaggacctgagtgcccgtcgacagggtggagccggggcgagtggcgga
actggggttcgggtcaaagaagaacctgtcagtgaagacgaacccatggactcgtgctca
tccgtgcaccctaatggtttggttaacggttacccctcatcctctgctacctgccccacc
ttgaaccctcataacgggcacggcgggacccccactccatcaccgtcccctgagctgagg
gactttgtgtggaacacgttcaggaagcagcatgtgctgacgctgagcgaagtcaagagg
ctgttcaacctccacttggcctccctgcctcccggacacagcctgttccactccatctca
gaccgcctgctacaggatactatactaatgagccaatgcaaacagatactggtgcctttt
ccagcccagagcacggcagctgcggatgaacagaaggtgtttgttttgtgggagacagga
gagaccttcgacaagcaccgtcaggtcctgtatgagatcttcatgaaaaactaccgggta
aggaggaacgtgatccagaccaggctgacgcaggagctgggagaccagactaccaaggcc
gacatggaccgcctgctcaaggagtgctgtgtgagcttaggagggatgtggtacctcaag
ggtaccctacagtcctga

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