Oncorhynchus masou masou (cherry salmon): 135512082
Help
Entry
135512082 CDS
T10723
Symbol
abca5
Name
(RefSeq) ATP-binding cassette sub-family A member 5
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
135512082 (abca5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omm02000
]
135512082 (abca5)
Transporters [BR:
omm02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
135512082 (abca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
AAA_23
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
135512082
NCBI-ProteinID:
XP_064789805
LinkDB
All DBs
Position
24:35207666..35333122
Genome browser
AA seq
1687 aa
AA seq
DB search
MYFIPIAPSCGERPHSCPRQLKHAGSNVSMQPNIIRRDAGVWHQTKSLLYKNLLIKWRTK
QQSLQELILPLLLLCLLILISTLNPHVYYGGISTMELEREDYHLLKGLGYTPINNATNHI
MEEVAQEMHLQDRLEMFSSEEDLENASLYEPSGYVGVVFMGSTPTSYRLRFPYNHLPLPS
DYTESIANCFASSVNCRAANYWYSGFIRLQTLIDAAIIQMQTKRSVWSEMDHLRVVMMGQ
PGSVEVQKFPHALISIYLVLAFTPFITFLIVNVAAEKEHRLKDTMTMMGLYDSAFWLSWG
LLYAALVTTMSILMSIIATYTALFPNSDFIVIFLLIFLYGISSIFFSFMLTPLFKKPKFA
STVGSMLTVVFGCLSLFTVLMKDFPQPLVWVLCLLSPSAFSIGIAQVVYLEAQGDGAVFA
TLANGPHPLYAPLLMLVLDCILYLLLAVYLDQVLPGEFGMRRSLVYFMKPSYWSKRSKRY
VEVSSVYETEVNGATGVNETVEPVSPEFRGKEAIRINNIRKVYKEKDSIVEALRGLTFDI
YEGQITALLGHSGAGKSTLMNILCGICPPTDGHASIYGSPVAEIAEGAEMRQLVGICPQF
NIIFDVLTVEEHLRIFAAIKGILPSDIDNEVSKVLKDLDLEKIMDAQAKNLSGGQKRKLS
VGIAILGDPKILLLDEPTAGMDPCSRHQVWSLLKSRRAGRVTVLSTHYMDEADILADRKA
VISQGQLKCVGSSLYLKTKCGVGYHLRMSIGGRCEVDGVTSLVKHHVPKAQLSRQQEAEL
TFTLPFESMDTFSGLFSELDCRPDLGIINYGVSMTTLEDVFLRLEAEAEVDQADYSVFNQ
EQVEDEGDASSLDDTDQRLLTFSDSKPEAVQGHALWRQQFSTVAWLHMLNMQRERKAFVY
TLALFLVFLAAVLVLSLATGNIQIHAPERQFLPIYLLRPNQAPRKYTTSLLVQNSSGSDI
SDFIRNLESQDIKVEMMKNTDYMSCAPHSAAINVTGSNKGFRYSVAFNSTTVHSLPMTVN
VLSNAILRGLNGTQRIHTWTKPFDYQIPDATSYALVYIEAIILGMLAAGMPAYFAMDHTR
DREIKCRSTLRISGLVPSAYWCGQAAVDIPFYYLILTTMTSILFSFHTANLLTSSNVTAV
ILCLIGFGPAMILFAYVVSFMFTRVQSNRDFFSVVSMMVCVVSASIVQLSFVNDNPGLTR
ILHNTLCFFNPLYPLMGCLNSITKATFLPSLYEEDFLWKNLLIAVLSPYLQCILLLFMLR
WLEIRYGGRTMKNDQFCRISSNTKAKVERNPEEGINEDEDVQMEKARVKEALTCQCCEEK
PVVVVSNLRKQYKCPREGISLKKRRTVATKNISFCVRKGEVLGLLGPNGAGKSTIMHMLS
GDTVPTAGQVLMGDYSTEFRPVDNPLEHIGYCPQVSPLWPRITLEEHLEIYAAIKGLCGQ
DVPGIITRVVNALELKGHLHKQAKNLSAGIKRKLCFALSMLGNPQIVLLDEPSTGMDPKS
KQRMWRAIRAAFKNRQRGAILTTHYMEEAEAVCDRVAIMVSGQLRCIGSIQHLKGKYGRG
YSLELKLREELTGLQQVALLHKEIRRIFPHAARQESFATLMVYKIPMEDVKSLAKSFSQL
ESAKQTFNFEEYNFSQSTLEQVFMEFAKEQENEEEEVGSLSTTFQWQRLRQDGPVPVNHA
DSIVHQL
NT seq
5064 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcatacctattgcgcccagctgtggagaacgtcctcattcatgccccagacag
ttgaagcatgctggtagtaacgttagtatgcagcccaacataatcagaagagatgccgga
gtctggcatcaaacgaaaagcctgctttacaagaatcttctcatcaaatggaggactaaa
caacagagtctgcaggagttgatcctgccgctgctgctgctgtgcctgctgattctgatc
agcaccctgaacccacatgtctactacggaggcatcagtaccatggagctggagagggag
gactaccacttactcaagggcctgggatacacccccattaacaatgccaccaatcacatc
atggaggaggtggcccaggaaatgcacttgcaggatcgcctggagatgttctctagtgaa
gaggatctggagaatgccagtctttatgagccctcaggctacgttggggtggtcttcatg
ggcagcacacccacctcttacaggttgcgcttcccttacaaccatctgcccctgcccagt
gactacactgaatctattgccaactgttttgccagctcagtgaactgcagagcagctaat
tactggtactctggcttcatccgcctccagactctcatcgacgccgccatcatacagatg
cagaccaagcggtcagtatggagtgagatggaccacctgcgtgtggtgatgatgggccag
ccagggtcagtggaggtccaaaagtttccccacgctctcatctccatctacctggtgctg
gctttcacacccttcatcaccttcctcatcgtcaacgtggcagcagagaaggaacacagg
ctcaaagacaccatgaccatgatgggcctctacgactctgccttctggctatcgtggggc
ctgctgtatgcagctctggtcaccaccatgtccatcctcatgtccatcatcgctacctat
acagctctcttccccaacagtgacttcatcgtcatcttccttctcatcttcctctacggc
atctcctctatcttcttctccttcatgctgacccctctgtttaagaagcctaagtttgcc
agcacggtgggctcaatgctgactgtggtgttcggctgcctgtccctgttcactgtcctg
atgaaggacttcccccagccgctggtctgggttctttgtctgctgtcccccagcgcattc
tccatcggcattgcccaggtggtgtacctggaggcccagggggacggagctgtgttcgct
accctggccaacggcccccatcccctctacgccccccttctcatgctcgtcctggactgt
atactctacctgctgctggctgtctacctggaccaggtcctaccaggtgagtttggcatg
cggcgctccctggtatacttcatgaagccatcctattggtccaagcgcagtaagcgctac
gtcgaggtgagctctgtgtacgagacagaggtgaacggggccacaggagtgaatgagact
gtggagcccgtctctccggaattcagggggaaagaggccatccgcattaacaacatccgc
aaggtgtacaaagagaaggacagcatcgtggaagctctgaggggcttgacctttgacatc
tatgaaggtcagatcacagccctcctgggccacagcggagcagggaagtccactctgatg
aacatcctgtgtgggatctgtcccccgactgacggccacgcctccatctatggctcccct
gtggcagagatcgctgagggggcagagatgaggcagctggtgggcatctgccctcagttc
aacatcatctttgacgtgctcactgtagaagagcacctgaggatatttgctgccattaaa
gggattctgccctctgacattgacaatgaggtgtccaaggtgctgaaggatctagacctg
gagaagatcatggacgcccaggctaagaacctgagtggaggccagaagaggaaattgtct
gtgggcatagccatcctgggagaccccaagatcctgctcctggatgagcctactgctggt
atggacccctgttccagacaccaggtgtggtctctgctgaagagtcgcagagcaggcaga
gtcacggtgctcagcactcattacatggacgaggcagacatactcgctgaccgcaaagct
gtgatctctcagggccaacttaagtgtgttggttcttccctatatctcaagaccaagtgt
ggagtaggataccacctcagaatgtctattggtggacggtgtgaggtggatggtgtcaca
tcattggtcaagcaccacgtccccaaggcgcagttgtcacggcaacaagaggctgagctg
acattcaccctccctttcgaaagcatggacaccttttcaggattgttctcagaactagac
tgcaggccagacctgggcatcatcaactacggggtgtccatgacaacgctggaggatgtg
tttcttcgtctggaggctgaggctgaggtggaccaggctgactacagtgtgttcaaccag
gagcaggttgaggatgagggtgatgcatcctctctggacgacactgaccaaagactactg
accttctctgacagcaagccagaggcggtccagggccatgctctgtggagacagcagttc
agcaccgtggcctggctacacatgctcaacatgcagagagagaggaaggcctttgtctac
actctggcattgttcctggtcttcctagctgctgtgctagtattgtctctggctacgggg
aacatccagatccacgctccagaacggcagtttctccccatctacctgctgagaccgaac
caggctccccggaaatacaccaccagtctactggtccagaactcatcaggctcggatatc
tccgacttcatccgtaacctggaatctcaggacatcaaggtggagatgatgaagaacaca
gactacatgtcctgtgctcctcacagtgcagccatcaacgtcaccggatccaacaagggt
ttcagatacagtgtagcattcaacagtactaccgtccactctttgcccatgacagtcaac
gtcctcagtaacgccatcctacgaggtctcaacggcacacaacgcatccacacctggacc
aagcccttcgactatcaaattcccgacgccacgtcatatgctctggtctacattgaggct
atcatactggggatgctagctgcaggcatgcctgcctacttcgccatggaccacacccga
gacagagagataaagtgccgttcaacgctgcgtatctctggcctggtcccgtctgcgtac
tggtgtggtcaggctgcagtggacatccccttctactacctcatactgaccaccatgacc
agcatcctcttctccttccatactgccaacctgcttacctctagcaacgtcaccgcagtg
atcctgtgtctcataggttttggtccagctatgatcctgttcgcctatgtggtgtctttc
atgttcacacgcgtccagagtaacagagacttcttctctgtggtctccatgatggtgtgt
gtggtgtctgcctccatcgtccagctgtcatttgtaaacgacaaccccgggctgacgagg
atcctccacaatacactatgtttcttcaaccctctctaccccttaatgggctgccttaat
tctatcaccaaggccaccttcctgccctccctctatgaagaggacttcctctggaagaac
ctgctcattgctgtcctatctccctatctgcagtgcatcctgctgctgttcatgctgcgc
tggttggagatccgctacggagggaggaccatgaagaatgaccagttctgcaggatctct
tccaatactaaggctaaagtggagcgtaacccagaggaggggatcaacgaggatgaagat
gttcagatggaaaaggctcgggtgaaggaggccctcacctgccagtgctgtgaggagaaa
ccagtagtggtggtgagtaacttgaggaagcagtataaatgtccaagggaaggaatctct
ctcaagaagaggaggacggtagccaccaagaatatctccttctgtgtacgcaaaggtgag
gtgcttggactgctggggcccaacggagcagggaaaagcaccatcatgcatatgttgtct
ggagacacagtcccaaccgctggacaggtcctgatgggggactacagtacagagttccgt
ccagtagacaaccccctggagcatataggctactgtccccaggtcagccctttgtggccc
cgcatcaccctggaggaacacctggagatctacgctgccatcaagggcctctgcggacag
gacgtccctggcatcatcacacgtgtggtgaatgctctggagctgaagggccacctccac
aagcaggccaaaaacctctcagctgggatcaagaggaagttgtgctttgctctcagcatg
ttggggaaccctcagatagttctgctggacgagccttctacagggatggaccccaagtcc
aaacaacgcatgtggagggctatccgggcagcgtttaagaaccgccagcgtggggccatt
ctgaccactcactacatggaggaggctgaggctgtgtgtgaccgcgtggccatcatggtg
tcagggcagctcaggtgtattgggtctattcagcacctgaaggggaagtatgggcgtggc
tacagcctggaattgaagctgagagaggagctgacggggctccaacaagtggcactgctc
cacaaggagatccgtcgaatcttccctcacgctgcaagacaggagagctttgccaccctg
atggtttacaagatccccatggaggatgtcaagtcactggccaagtccttctctcagcta
gagagtgctaagcaaaccttcaactttgaagagtacaacttttcacaatcaaccttagag
caggtcttcatggagtttgctaaggagcaggagaacgaggaggaagaggtgggttccctc
agcaccacgttccagtggcagcggctccgccaggacggccctgtgcctgtcaaccacgca
gacagcattgtgcaccagctctga
DBGET
integrated database retrieval system
