Oncorhynchus masou masou (cherry salmon): 135512157
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Entry
135512157 CDS
T10723
Name
(RefSeq) exportin-5-like isoform X1
KO
K14289
exportin-5
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135512157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
omm03016
]
135512157
03036 Chromosome and associated proteins [BR:
omm03036
]
135512157
Transfer RNA biogenesis [BR:
omm03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
135512157
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
135512157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
CD_NTase_C
Motif
Other DBs
NCBI-GeneID:
135512157
NCBI-ProteinID:
XP_064789944
LinkDB
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Position
24:39203948..39231872
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AA seq
1225 aa
AA seq
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MMGEPVADMCDQLVKAVNVMMDAESSQIYRLEALKFCEEFKEKCSFCVPCGLQLADKTQT
AVVRHFGLQILEHVIKFRWNNMPQQEKVQLKNCAMGLLSTGTYPILEEESHIKDVLSRII
VEMIKREWPQHWPDMLKEMEALTSVGEAQTELVMLILLRLAEDVITFRTLPTQRRRDIQQ
TLTQNMESIFSFLLAILQLHVDEYRKLKRIPGQELQAKAQCRVGVATLNTLAGYIDWVAL
ANITNDNCRLLEMLCLLLSETELQLEAAECLLIAISRKGKLEDRKPLMVLFDDVAMHYIL
SAAQSADGAAICNKSSPTQPVGVGVVERHYTFLKRLCQVLCALGSQLCSLVGSDVEVEVP
ANLIKYTEAFLAFTTHPSQFLRSSTQITWGTLFRHEILSKDPVIIQMTIKYFRATMTNLV
KTGFPSSNDSPSCEYSRHDFDSDEDFNSFFNSFRAQQGEVVRNACRIVPLEAFQIAAEWL
QYQISAPIDIGTTVSKTAEGLCSILSPSVVQWDAMTFFTESVVGKIFKNVEDEKLPVDQG
IELLQAVLNYNTQDPLILSCVLTNVSVLFPFVTHRPHFLPQVLYKLFASITFEVVEESKA
PRTRAVKNIRRHACSSIIKMSRDYPQFILPCFDMMYNHVKKLFSSEALLNMLEKCALMEA
LVLISNQFKDYNKQKHFLEELMATVAARWTSDEMRRVLWDPTLFLDFVGADQLVAEGTEH
TTGINKSRLSFCVYTILGVVKRARWPADLEEAKAGGFVVGYTPNGAPIYRNPCSAQVLAL
LPNLLALIRTHNSLFLPENMCRLSETFSKAYDMIEVEKNMVLGLPQPALDIYDPPLYKTH
LERMQGFFCTLYDNCYHILGKAGLSLQQDFYTIEGLAEQIVGSVFVSLDTVPDHRLRTML
RVFLKQLVVSCPQECYNSLLCPLLGTLFAYMLQRLNLRWQIINQRSTVSGEEEEEEDESC
EENQEMLEEQLVRLLTREVLDLLTHACIMKKVPAPAGNKEDVDEEEMMSTESQAVAVSPA
QPTGELTELGKCFLKHEDIYMTLLTISFTSLSWKDTSNCHRSASIVCWTLLRQVVGGNLL
PEAVTWFYTSVLKGLQMHGQHEICNSALIQLALLMYENLRPRYMELRDVMTQIPDINLEA
LDQYDQRLLEPSSAQRLGEKKRKDQFKKLIAGAVGKALAQQFKKEVHIRNLPSLFKKPKP
EKRDILETSESGALAALFSPVLDDI
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgatgggtgaaccggtggctgatatgtgtgatcagcttgttaaagctgtgaacgtgatg
atggacgcggaatctagccaaatatatcgcttggaggccctaaagttttgtgaagaattc
aaagagaagtgttccttctgtgtcccatgtgggctacagttggcagataaaactcaaaca
gcagtggtgaggcactttggtctacagatactggagcacgtcatcaagttcagatggaac
aacatgccacagcaagagaaagtccagctgaagaactgtgctatggggctattgtcaact
ggcacatatcctatcctggaggaggagagccacatcaaggacgttctctcgcggatcata
gtggagatgatcaagagagaatggcctcagcactggcctgacatgctgaaggagatggag
gcactcaccagtgtaggggaggcccagacagagctggtgatgttgatcctgctgcggctg
gcggaggacgtgatcaccttccggaccttgcccacccagcgccgccgggacatccagcag
accctcacccagaacatggagagtatctttagcttcctgctcgccatcctgcagctccac
gtcgacgagtaccgcaaactgaaaagaatacctggccaagaattgcaggccaaggcccaa
tgtcgggtaggcgtggccactctaaacaccctggcaggctacatagactgggttgccctg
gcaaacatcaccaatgacaactgtcgcctgctggaaatgctgtgtctattgctcagtgag
acagagctgcagctggaggctgcagagtgcctgcttatcgccattagccgcaaggggaag
ctggaggacaggaaaccactcatggtgctgtttgatgacgttgccatgcactacatcctc
tctgctgcacagtctgcagatggagcagcaatatgcaacaaatcctctccaacacagcca
gtgggggtgggggtggtggagagacactacaccttcctgaagaggctatgtcaggtcctg
tgtgccctgggcagccaactctgctcattagtgggttcagatgtggaggtagaggtacca
gcaaaccttatcaagtacacagaagcgttcctggccttcaccacacacccaagccagttc
cttaggtcttccacccagatcacatggggaactttgttcagacatgagattctctccaag
gatcctgtcatcatccagatgaccatcaagtactttagagccaccatgaccaacctagtc
aagactggtttcccttccagcaacgacagtcccagctgtgagtactcccgtcatgacttt
gacagtgatgaagacttcaactccttcttcaactcgttccgagcgcagcagggggaggtg
gtccggaatgcgtgtcgtattgtccccttggaggccttccagattgcagcagagtggctg
cagtatcagatcagtgcgcccatcgatatcggaaccactgtgtctaagacggctgagggg
ctgtgttctatcctgtctccgtcagtggtccagtgggatgctatgaccttctttacagag
agtgttgtgggaaagatctttaagaacgtggaggatgagaagttgccggtagaccagggc
attgagctgcttcaggctgtgttgaactacaacacccaagaccctctcatcctgtcctgt
gtcctcaccaacgtctccgtcctcttccccttcgtcacacaccgacctcacttcctgcct
caggtcctctacaagctatttgcctccatcacattcgaggtggtagaggagagtaaggca
ccacggacgcgtgcggtgaagaacatcagaagacacgcctgctcctccatcatcaagatg
tctcgagactacccacaattcattcttccgtgttttgacatgatgtataaccacgtgaag
aagctgttctccagcgaggctctgttgaacatgctggagaagtgtgctcttatggaggcc
ctggtcctcatcagtaaccagttcaaagactacaacaagcagaaacacttcctggaggag
ctcatggccactgtggccgctcgctggacctccgacgagatgaggcgtgtgctgtgggat
cctactctgttcctggacttcgttggtgctgatcagctggtggctgaaggcacagaacac
acaacgggcatcaacaagtcacggttgagtttctgtgtgtacaccatcctgggggtggtg
aagagggcccgctggccggctgacctggaggaggcgaaggcagggggcttcgtagtgggc
tacacccctaatggagcccccatctacagaaacccctgcagcgcccaggtcctggcactg
ctgcccaacctgctcgccctcatcagaacccacaacagtctcttcctgccggagaacatg
tgtcgtctgagtgagacgttctccaaggcctacgacatgatagaggtggagaagaacatg
gttctaggcctgcctcagccagccctggacatctatgaccctccactgtataagactcat
ctagagcgcatgcagggattcttctgtaccctctacgacaactgttaccatatcctgggg
aaggcaggcctatcattgcagcaggacttctacaccatcgagggattggctgaacagatc
gttggttctgtctttgtctcgctcgacacggtgcctgaccacagactccgcaccatgctc
cgggtgttcctgaagcagctggtggtgtcatgtcctcaggagtgctacaacagtctgctc
tgccccctgctgggcactctgttcgcctacatgctacagagactcaatctcaggtggcag
atcatcaaccagaggagtactgtcagtggggaggaggaggaggaggaggacgagtcgtgt
gaggagaatcaggagatgctggaggagcagctagttcggctgctcaccagagaggttctg
gacctgctcactcacgcctgcataatgaaaaaggtgcctgcgccagcaggaaacaaggaa
gatgtggatgaggaggagatgatgtccactgagtcccaggcagtcgctgtctcccctgcc
cagccaacaggcgaactgacggagctggggaagtgttttctcaaacacgaggacatctat
atgaccttgttgaccatctcattcacctctctgtcctggaaggacaccagtaactgtcac
cgcagcgcctccatcgtgtgctggaccctgctacgacaggttgtaggtgggaaccttttg
ccagaggcggtcacatggttctataccagtgttctgaagggactgcagatgcatgggcag
catgagatctgcaactcagccctcatacaactggccctgcttatgtacgagaacctgcgg
ccgcggtacatggagctaagagacgtgatgactcagatccccgacatcaatctggaggct
ctagaccagtacgaccagcggttgctggaacccagctccgctcagaggttgggagagaag
aagaggaaagaccagttcaagaagctcattgctggcgctgtggggaaagctctggcccag
cagttcaaaaaggaggtacatatacgaaatcttccgtctctctttaagaagccgaagcct
gagaaaagggacattctggagaccagtgagagtggagcactagcagcactcttctcccca
gtgctggatgacatctag
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