Oncorhynchus masou masou (cherry salmon): 135512207
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Entry
135512207 CDS
T10723
Symbol
kcnma1a
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1a isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
135512207 (kcnma1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omm04040
]
135512207 (kcnma1a)
Ion channels [BR:
omm04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
135512207 (kcnma1a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
135512207
NCBI-ProteinID:
XP_064790046
LinkDB
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Position
24:42124669..42447549
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AA seq
1204 aa
AA seq
DB search
MLAEPDATVLHGSGNSMMSRNIYHNTNQDSSISISKMDVIIPFSPDVPCDNNGQRMWWAF
LASSMVTFFGGLFIILLWRTLKYLWTVCCHCNTKKKEAQKVNNPANSQAADGTPKGPDEK
DEVVPASEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALGIYFIDSSDPIESCQ
NFYKDFTLQIDMFFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRS
WLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDP
WENFQNSQSLSYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEI
IELIGNRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNIS
PNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCPDPDAEDASNIM
RVISIKNYSPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKAGFIAQSCLAQG
LSTMLANLFSMRSFIEIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPAVCELCYVKLK
LLLIAIENKSELGESSILINPGNHVKMQEGTLGFFIASDAKEVKRAFFYCKACHDDITDP
KRIKKCGCKRLEDEHPSTLSPKKKQRNGGMRNSPNNSPKMMSRHDPLLIPGNEQMENMDM
NVKQYDSTGMFHWCPSKEIEKVILTRSEASMTVLSGHVVVCIFGDVTSALVGLRNLVMPL
RASNFHYHELKPIVFVGSLEYLRREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCV
ILSANQNNIDDASLQDKECILASLNIKSMQFDDSIGLLQANSQGFTPPGMDRSSPDSSPV
HGLVRQASVTTGANIPIITELVNDSNVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLD
SLMSATYFNDNILTLIRTLVTGGATPELEALLAEENALRGGYSTPQTLANRDRCRVAQLA
LYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLATPSQCTKRYVITNPPYEF
ELVPTDLIFCLMQFDHNAGQSRASLSHSSHSSHSSSKKSSSVHSIPTTNRQNRNSKAREA
GHKQNATRMNRMSQERKWFTDEPENAYPRNIQIKPMSTHMANQINQYKSTSSLIPPIREV
EDEC
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgctagctgagccggatgccaccgttctccatggaagcggcaactctatgatgagtaga
aatatctatcataatacaaatcaggactcctcgatctctatatccaagatggacgtgatc
atccccttctcgccagacgtgccctgcgacaataatggccaacgcatgtggtgggcattc
ctcgcctcttctatggtgacgtttttcgggggtctcttcatcattctcctttggaggacc
cttaaatacctgtggaccgtgtgctgccactgcaacaccaaaaagaaggaggcccagaag
gtgaataaccctgctaacagtcaggcagcagatgggacacctaagggtcctgatgagaag
gacgaagtggtacctgccagcgaggtggggtggatgacctctgtgaaggactgggccggg
gtcatgatatcagcacagacactcaccggcagagtcctggtcgtgctcgtctttgctctc
agcattggagcacttggaatatactttatagactcttctgatcccatagaatcctgtcag
aatttctacaaagatttcacgttacagatcgacatgttcttcaatgtcttcttcctcctc
tactttgggctgcggttcatagcagccaatgataagctgtggttctggctggaggtcaac
tcagtggtggacttcttcactgttcctcctgtcttcgtatcggtctacttgaataggagc
tggctgggcttaagattcctgagagccttgagattgatacagttctcagaaattttacag
tttttgaatatcttaaaaacaagcaattccatcaagctggtgaacctgtgttccatcttc
ataagcacatggctaacagctgccggattcatacatttggtggaaaactcaggggatcct
tgggaaaacttccaaaattcccagtcactttcctattgggaatgtgtctacttgctcatg
gtcactatgtcaacagtgggctacggggatgtctatgcaaaaaccaccctgggacgcctg
ttcatggtcttcttcatccttgggggtttggccatgtttgccagctacgtccctgaaatc
atagagttaataggaaaccgcaagaaatatggtggttcctatagtgcggttaatgggaga
aagcacattgtggtctgtggtcatataacgctcgaaagtgtctccaacttcctcaaagac
ttcctacacaaggacagggatgatgtcaatgtagaaattgtttttctccataatatttcc
cctaatcttgagctggaagccttgttcaaacgccactttacccaagtggagttctaccag
ggatctgttctcaaccctcacgatctggcccgagtgaagattgagtcagcagacgcctgt
ctgattctggctaataaatactgtccagatcccgatgctgaagatgcctccaacatcatg
agggtcatctctatcaagaactattcccccaagatacgaattatcactcaaatgttacaa
taccataacaaggctcacctgctcaacattcctagctggaactggaaggagggggatgat
gcgatctgtctagcagagctgaaggctggcttcatagctcagagctgtctagcccagggc
ctctccaccatgcttgccaatctcttctccatgaggtctttcatcgagattgaagaggat
acgtggcagaagtactatttagaaggggtagctaatgagatgtacacagagtatctgtcc
agtgcctttgtggggctctccttcccagcagtctgtgagctgtgctacgtgaagctgaag
ctgttgcttatcgccatcgagaacaagtcggagctgggagagagcagcatcctcatcaac
ccggggaaccacgtaaagatgcaggaaggaactctggggttcttcatcgccagcgacgcc
aaagaagtaaagagagcatttttctactgcaaagcttgtcacgacgacatcacagacccc
aaacggatcaaaaagtgtggctgcaaacgacttgaagatgagcacccgtcaactctgtcg
cccaaaaaaaagcagcggaacggaggtatgcgaaactcacccaacaactcgcccaaaatg
atgagcaggcatgaccctctactaatccctgggaacgagcagatggagaacatggacatg
aatgtgaagcagtacgactccacaggaatgttccactggtgcccatctaaagagattgag
aaggtcatcctgacccggagtgaggcatccatgacggtgttgagcggccatgtagtggtc
tgtatatttggagatgtcacgtccgctctagtggggctgcgaaacttggtgatgcctttg
agagccagcaacttccattatcacgagctgaagcccatagtgtttgtgggctcgctggag
tacctgaggagagagtgggaaactctacacaacttccccaaggtctccatactacctggt
acgccattaagtcgtgcagatttaagggctgtcaacatcaacctctgcgacatgtgcgtg
atactgtcggccaatcagaacaatatcgacgacgcctcgctgcaggataaggaatgcatt
ctggcgtcgctcaacatcaagtctatgcagtttgacgacagcatcgggctcttgcaggct
aactcccaaggtttcacgcctcctggaatggaccggtcctctccagacagcagtccagta
catggtttagtacgccaggcctccgtcaccaccggcgccaacatccccatcatcactgaa
ctagtgaacgactccaacgttcagttcctggaccaagatgatgatgatgacccggacaca
gagctgtacctgacacagcccttcgcctgcggaactgccttcgctgtcagcgtgctggac
tctctcatgagtgcaacatacttcaacgataatatcctcaccctgatccggacgctggtg
actgggggagccaccccagagctagaggctctattggccgaagagaacgccctgcgaggg
ggctacagcacgccacagacactggccaaccgagacaggtgtcgtgtagcccagctagcc
ctctatgacgggccctttgccgacttgggggatggcggttgctatggagatttgttttgt
aaagcgttgaagacgtacaacatgttgtgcttcggaatatacagattgagagacgctcac
ctcgccacgcctagccagtgtaccaaacggtatgtgatcaccaaccctccgtatgagttt
gagctggtccccacagacctgatcttctgcctgatgcagtttgaccacaacgctggccag
tcccgggccagcctctcccacagctctcactcctcccattcctctagcaaaaagagctcg
tccgtccactccatccccaccaccaaccggcagaaccgcaacagcaaggcccgggaggcc
ggccacaaacagaatgcaacaaggatgaatagaatgagccaagaaaggaaatggtttaca
gatgaaccagaaaatgcctacccacggaacattcagatcaagcccatgagcactcacatg
gccaaccaaatcaaccaatacaaatccactagcagtctgattccaccaatcagagaagtt
gaagatgaatgctga
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integrated database retrieval system
