Oncorhynchus masou masou (cherry salmon): 135512254
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Entry
135512254 CDS
T10723
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04517
IgSF CAM signaling
omm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
135512254
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
135512254
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omm04812
]
135512254
Cytoskeleton proteins [BR:
omm04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
135512254
Intermediate filaments
Intermediate filament-binding proteins
135512254
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
CH_2
PH_11
Motif
Other DBs
NCBI-GeneID:
135512254
NCBI-ProteinID:
XP_064790149
LinkDB
All DBs
Position
24:45602860..45725070
Genome browser
AA seq
2360 aa
AA seq
DB search
MELQRATSMPGPLSPGPVFPGSHSPGPLSPSSGPGPSLASSPGPDPGYSAKQAAFNYNQL
EGRFKQLQDEREAVQKKTFTKWVNSHLARVSCRITDLYMDLRDGRMLIKLLEVLSGEKLP
KPTKGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQD
IRVETEDNKEKKSAKDALLLWCQMKTAGYPNVNIHNFSTSWRDGMAFNAILHKHRPDLID
FDKLKKSNAHHNLQNAFNLAEQHLGLHKLLDVEDISVDHPDEKSIITYVVTYYHYFSKMK
ALKVEGKRIGKVLDNAIETDNMIQKYESLASDLLEWIEQTIIILNNRRFANSLVGVQQQL
QAFNTYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVYIPRDGKLISDINKAWERLEK
SEHERELALRTELIRQEKLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAAT
KKHEAIETDIGAYEERVQAVLSVAKELEAENYHDIKRVTARKDNVLRLWEYLLELLKARR
IRLEMNLGLQRVFQEMLHIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHTLVEADIAIQA
DRVKAVNNNAQKFAIDAEGYKPCDPQVIRDRVAHMEFCYAELSQLAAERCARLEESRRLW
KFFWEMAEEEGWIREKEQILSSEDCGKDLTGTVRLLSQHRAFEDEMIGRAGHLQQTIKQG
EALVAADHFGADKIRERIQDIQEQWAALERLSAVRKARLEEACNLHQFQTDADDIDAWML
DVLRIVSSADVGHDEFSTQALVKKHKDVAEEIAGYRPVIDALHEQSKTLPGEQTGSEEVQ
GRLSGIEERYKEVAELTRLRKQALQDALALYKMFSEADACEVWIDEKEQWLNSMEIPEKL
EDLEVVQHRFESLEPEMNNQASRVAVVNQIARQLIHSGHPSEKEIKAQQDKLNTRWSQFR
DLVDLKKDSLNSALGVQNYHLECNETKSWIREKTKVIESTQELGNDLAGVMALQRKLTGM
ERDLTAIEDKLGELGKEGEHLAAEHPDQAQGIMGRLGEITGVWDEMKGTLKNREESLGEA
SKLQQFLRELDDFQSWLSKTQTAIASEDMPNTLTEAEKLLAQHEGIKNEIRNYEVDYQKM
RDMGEMVTQGQTDAQYMFLRQRLQALDTGWNELHKMWENRQNLLSQSHAHQLFLRDTKQA
EAFLNNQEYVLAHTEMPTTLEGAEGAIKKQEDFMTTMDANEEKINAVVDTGRRLVSDKNI
NADRIQEKVDSIDERHQKNRLAASELLCKLKDNRDLQKFLQDCQELSLWINEKMLTAQDM
SYDEARNLHSKWLKHQAFMAELQSNKEWLDKIEKDGMQLIAEKPETEAMVKEKLAALHKM
WDDLESTTQTKAKCLFDANKAELFTQSCADLDKWLVGVDGQIQSDDYGKDLTSVNILLKK
QQMLESQVEVRQKEVEELQSQAQVLSQEGKDTDEVDGQRRIVEKKFQQLLDPLKKRKGNL
MASREIHQFNRDVEDEILWVEERMPLATSTDHGNNLQTVQLLIKKNQTLQKEIQGHQPRC
DDIFERSQQVLKDDDNSPSGEGIRQRLADLRRLWAQILEETAKRHGRLEEAHKAQQYYFD
AAEAEAWMSEQELYMMSEEKAKDEQSSVAMLKKHQILEQAVEDYAETVHQLSKTSRGLTA
AGHPESERIGMRQSQVDKLYAGLKDLSEERRGKLDERFRLFQLNREVDDLEQWIAEREVV
AGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDTVNQLADELINSGHADAATIAEWK
DGLNEAWADLLELIDTRTQILAASFELHKFYHDAKEILNRILDKHKKLPEELGRDQNTVE
TLQRMHTTFEHDIQALGTQVRMLQEDAVRLQSAYAGDKADDIQKREGEVLEAWRTLLEAC
DGRRVRLLDTGDKFRFFSMVRDLMLWMEDVIRLIEAQEKPRDVSSVELLMNNHQGIKAEI
DARNDSFTNCIELGKSLLARKHYALEEIKEKLLQLTDKRKDMIDKWEDRWEWLRLVLEVH
QFGRDAGVAESWLLGQEPYLSSREMGQNVDEVEKLIKRHEAFEKSAATWEERFSALERLT
TMELLEVRRQQEEEERRSNPPPAETQTDTASPQQKEGEQVSLNGLPSDQDSPRDIGEGSD
IVNGVAEPSPGGSPSAARKGKPSQAATLPAKSLDSTPANQMEGLLHRKHEWEGHNKKASS
RSWHNVYCVINNWEMGFYKDIKSASQGIPYHSEIPISLKDAACEIALDYKKKKHVFKLKA
TDGNEYLFQAKDDEEMNSWMQAISSAASPDKTEMTPSSHSTPASSRAQTLPTSVALATES
SPGKREKDKEKRFSLFSKKK
NT seq
7083 nt
NT seq
+upstream
nt +downstream
nt
atggagctacagagggcgaccagcatgcctggccccttgtccccagggcctgtctttcca
gggtcccactccccagggcccctgtccccttcctctgggcccggcccctctcttgcctcc
agccccggccctgatccgggctactctgctaaacaggctgccttcaactacaaccaactc
gagggccgatttaagcagctgcaagatgagcgtgaagcggtacagaagaagaccttcacc
aagtgggtcaactcccacctagccagggtgtcctgcaggatcactgacctctatatggac
ctgagagatggacgcatgctcatcaaactactggaggttctctctggggagaaactgccc
aagcccactaaggggcgcatgcgtatccactgcctggagaacgtagacaaggccctgcag
ttcctcaaggagcagagggtccacctagaaaacatgggctctcatgacatcgttgacggc
aaccaccgcctcacccttggcctcatctggaccatcatcctccgcttccagatccaggac
atcagagtggagactgaggataacaaggagaagaagtcggctaaagatgctctgctgctc
tggtgccagatgaagaccgcaggatatcccaacgtaaacattcacaacttcagcaccagc
tggagggatggcatggctttcaacgccatcctccacaaacacagacctgacctgatagac
tttgacaagctgaaaaagtcaaatgcccaccacaacctgcagaatgccttcaacctggca
gagcaacacctgggccttcacaagctactagacgtagaggatatcagcgtggaccaccct
gatgagaagtccatcatcacctatgttgtgacctactaccactacttctccaagatgaag
gccctgaaggtggagggcaaacggattgggaaggtgctggacaatgccattgagaccgat
aacatgattcagaaatatgagagtctggcctctgacctcctggaatggattgaacagacc
atcatcatcctcaacaaccgcaggtttgccaactccctagtgggggtgcagcaacagctc
caggccttcaacacctaccgtaccgtcgaaaagccgcccaagttcactgagaaaggcaac
ctggaggttctcctcttcaccatccagagcaagatgagggccaacaatcagaaggtctac
atcccgcgggacggaaaactcatctcagacataaacaaggcctgggagaggctggagaag
tcagagcatgagagggagctggctctaaggactgagctgattcgtcaggagaaactggag
cagctggcccgccgctttgaccgcaaagccgccatgagagagacctggctgagtgagaac
caacggctcgtctcacaggacaactttggcttcgacctgcaggcggtggaggccgccacc
aagaagcacgaggccatcgagacggacatcggcgcctacgaggagcgtgtgcaggcagtg
ctctccgtggccaaggagctggaggcagagaactaccatgacatcaagcgcgtgacagcg
aggaaggacaacgtgctgcgtctgtgggagtacctgttggagctgctgaaggcccggcgc
atccggctggagatgaacctgggcctgcagagggtcttccaggagatgcttcacatcatg
gactggatggatgagatgaagatgctgctgctgtctcaggactatgggaaacacctgctg
ggagtggaggacctgctgcagaagcacactctggtggaggctgatattgccatccaggcc
gaccgcgtcaaagccgtcaacaacaacgctcagaagttcgccattgatgcagagggctac
aagccctgtgacccccaggtgatccgggaccgagtggcccacatggagttctgttacgca
gagctgagccagctggccgccgagcgctgcgcccgcctggaggagtcccgccgcctctgg
aagttcttctgggagatggccgaggaggagggctggatccgtgagaaagagcagatcctg
tcttcggaggactgcggtaaggatctgacgggcaccgtgcgtctgctgagccagcaccgc
gccttcgaggatgagatgatcggccgcgctggccacctgcaacagaccatcaagcaggga
gaggcgctggtggcagccgaccacttcggagccgacaagatccgtgagcgcatccaagac
atccaggagcagtgggcggccttggagaggctatctgccgttaggaaggcccggctggag
gaggcctgcaacctgcaccagttccagactgacgccgacgacatcgacgcctggatgctg
gatgttctccgcattgtgtccagtgccgacgtgggccacgacgagttctccacccaggcc
ctggtcaagaagcacaaggatgtggccgaggagattgccggctaccgacctgtcatcgac
gccctgcacgagcagtccaaaaccctgcccggggaacagactggctcagaggaggtgcag
gggcgcctgtcgggcatcgaggagcgctataaggaggtggctgagctgacccggctgagg
aagcaggccctacaggatgccctggccctctacaagatgttcagcgaggcggatgcctgt
gaggtgtggatcgatgagaaggagcagtggctcaacagtatggagataccagagaaactg
gaggatctggaagtcgttcagcacaggtttgaaagtctggagccagagatgaacaaccaa
gcctcacgcgttgccgtggtgaaccagattgctaggcaactcatccacagtggtcacccc
agtgaaaaggagatcaaagcccaacaggacaaactcaacaccagatggagtcagttccgt
gacctagttgacctgaagaaagactccctcaactcagctctgggtgtacagaactaccac
ctggagtgtaacgagaccaagtcgtggatccgcgagaagaccaaggtgatcgagtccacc
caggagctgggcaatgacctggccggggtcatggccctgcagcgcaagctcaccggcatg
gagcgtgacctgaccgccatcgaggacaagctaggagaactggggaaggagggggagcac
cttgcagccgagcaccctgaccaggcccagggcatcatgggtcgcctgggggagatcaca
ggagtgtgggacgagatgaagggcaccctgaagaaccgcgaggagtccctgggcgaggcc
agcaagctgcagcagttcctccgggagctggatgacttccagtcatggctgtccaagacc
cagacggccatcgcttcagaagacatgcccaacacactgacggaggccgaaaagctgctg
gcgcagcacgagggcatcaagaacgagatccgcaactatgaagtggactaccagaagatg
agggacatgggggaaatggtgacccagggccagacggacgcccagtacatgttcctgagg
cagaggctgcaggccctggacacaggctggaacgagctgcacaagatgtgggagaaccgt
cagaacctgctgtcccagtcccatgcccaccagctgttcctcagggataccaagcaggct
gaagccttcctcaacaaccaggagtacgtgctggcccatactgagatgcccacgactctg
gagggggcagagggagccattaagaagcaggaggacttcatgaccaccatggacgccaac
gaggagaagatcaatgccgtggtggacaccggacgcagactggtcagtgacaaaaacatc
aacgctgaccgcatccaggagaaagtggactctatcgatgagagacatcagaagaaccgc
ttggcggccagtgagcttctctgtaagctgaaggataacagagacctgcagaagttcctt
caggactgccaagagctgtccctgtggatcaatgagaagatgctcacagctcaggacatg
tcgtacgacgaagccaggaacctccacagcaaatggctcaaacaccaggccttcatggcc
gagcttcagtccaacaaggagtggctggacaagatcgagaaggacgggatgcagctgata
gctgagaagccggagaccgaggccatggtgaaggaaaagctggcagcactccataagatg
tgggatgaccttgagtccaccacccagactaaggccaagtgtctgtttgacgccaacaag
gccgagctgttcacccagagctgtgccgacctggacaagtggctggtgggagtggatgga
caaatccaatcagacgactacggcaaagatctgaccagcgtcaacatcctgctcaagaaa
caacagatgcttgagagccaggtggaggtgcgtcagaaggaggtggaggagctgcagagc
caggcccaggtcctcagccaggaggggaaggacaccgatgaggtggacggccagcgccgc
atcgtggagaagaagttccagcagctgctagacccactgaagaagaggaagggaaacctc
atggcctcccgcgagatccaccagttcaacagagacgtggaggacgagatcctctgggtt
gaagagagaatgccactggcaacatctacagaccacggaaacaacctgcaaacagtccag
ttactcatcaagaaaaaccagaccctgcaaaaggagatccagggccaccagccgcgctgt
gacgacatctttgagcggagtcagcaggtgctgaaggatgacgacaacagccccagtggc
gaggggatccgccagcggctggccgacctgcggcgcctgtgggcccagatcctggaggag
acggccaaacgccatggacgcctggaggaggcccataaggcccagcagtactattttgat
gctgccgaagctgaggcctggatgagcgagcaggagctctatatgatgtcagaggagaaa
gccaaggatgagcagagctccgtggccatgctgaagaagcaccagatcctggagcaggct
gtggaggactatgctgagactgtccaccagctctccaagaccagcaggggcctgacggcc
gccggacacccagaaagtgaacggatcggcatgcgtcagtcccaggtggataagctgtac
gcggggctcaaggacctgtcggaggagaggagggggaagctggacgagaggttccgtctt
tttcagctcaacagggaggtggatgatctggagcagtggatcgctgaaagggaggtggtg
gctgggtcacatgagctgggacaggactatgaacatgtcacgatgcttcaggagcgtttc
cgtgagtttgctcgcgacacgggcaacattggtcaagagcgtgtggacactgtcaaccag
ctggcggacgaactcatcaactcgggccacgccgacgcggctaccatcgcagagtggaag
gacgggctgaatgaggcgtgggccgacctgctggagctgattgacacacgcacgcagatc
ctggcagcgtccttcgagctgcacaagttctaccacgacgccaaggaaatcctcaaccgc
atcctggacaaacacaagaagctgcctgaggagctgggccgggaccagaacacagtggag
accctgcagaggatgcacaccaccttcgaacacgacatccaagccctggggacacaggtg
aggatgttgcaggaggatgctgtgcgcctgcagtctgcctatgccggagacaaggctgat
gacatccaaaagagagagggtgaggttttggaggcctggagaacactgctggaagcctgt
gacggccgcagggtcagactgctcgacaccggcgacaagttccgtttcttcagcatggtc
cgagacctcatgctctggatggaggacgtcatccgcctcatcgaggctcaggagaagccc
agggacgtgtcgtctgtggagctcctgatgaacaaccaccagggcatcaaggctgagatc
gacgcccgtaacgacagctttaccaactgcatcgagctgggcaagtccctgttggcacga
aaacactacgcattagaggagatcaaagagaagttactacagttgacggacaagaggaaa
gacatgattgacaagtgggaggacagatgggagtggcttagattggttctggaggtgcac
cagtttggaagggatgcgggtgtggccgagtcgtggctgctgggacaggagccgtacctg
tccagcagggagatgggtcagaacgtggatgaagtggagaaactcatcaagagacacgag
gcctttgagaagtcagctgccacctgggaagagcggttctctgctctggaacggctgact
acgatggaattactggaagtgagaagacagcaagaggaggaggagaggaggagtaatccc
ccacctgcagagacccagacggacactgcatcgccacagcagaaggagggtgagcaagtg
tctctgaatggactgccatcggaccaggactcccctcgggacattggggagggaagtgac
attgtaaatggggtggcggagcccagcccaggcgggtcgcccagtgcagcacgcaagggc
aagcccagccaggctgccacgctcccggccaagtctctggactcaaccccagccaaccag
atggaaggcctcctgcaccgcaaacatgagtgggagggtcacaacaagaaggcatccagc
agatcctggcacaatgtgtattgtgtgatcaacaactgggaaatgggcttctacaaagac
attaagagtgccagccagggcatcccctatcacagcgagatccccatcagcctgaaggac
gctgcgtgtgagatcgccctcgattacaagaagaagaagcatgtgttcaaactgaaagct
acagatgggaatgagtatctcttccaagccaaagatgacgaggagatgaactcgtggatg
caggccatctccagtgctgcgtcccctgataagaccgagatgacccccagcagccatagc
acccctgcctccagccgagcccagaccttgcccacctctgttgccctggcaaccgaatcc
agcccaggcaagcgcgagaaagacaaagaaaaacgcttcagccttttcagcaaaaagaag
tag
DBGET
integrated database retrieval system
