Oncorhynchus masou masou (cherry salmon): 135512341
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Entry
135512341 CDS
T10723
Name
(RefSeq) zinc finger SWIM domain-containing protein 8-like isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
135512341
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GFIT
Other DBs
NCBI-GeneID:
135512341
NCBI-ProteinID:
XP_064790337
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Position
24:complement(55940969..56153639)
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AA seq
2001 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSGGPNSPTVKIKD
GQVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAYWSFPENEEDIRLYSCLANGS
PDEFQRGEQLYRMRAVKDPLQIGFHLSATVVSPQTGQSKGAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDSNAAPLLE
ILTEQCLTYEQIIGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMCDDMVVLWRLA
VLDPTMSPQRRLELASQLKQWHLKVIEIVKRGQHRKSLDKLFQGFKPAVESCYFNWEVAY
PLPGITYCSADKKSASFCWARAVQQQRGAKAGLAGDTSELGGGGGRSGSSEGGGGDYKGR
TPQQEVAVRPKETIVSKRKGLSAGSGGGVLVRLGGSVCLSLEEGSSKGMYKGAGSSSSIG
GKAKLAQGGKSSSGGSGGVGGKHQAAKRRTSSEDSSLEPDMAELSLDDGSSLALGAEASN
TFDFTPPPPEMLPSPSPLLREPHKYSGGGKGAGNMPKERSFEVKRVTLAATLPATESQPA
FPLKENAAVVVEAAVVLEKEVEVEAEMEVNGNKEVAPAGDVRLSTSVAVVTVTAAAAKPP
RGGRRETGAGAVALPNQSPRAGGDPVGEDDYRAYYLNAASEEGAERVPENNHEEEPDIFA
GIKPLEQEGQMEVLFACAEALHAHGYSNEACRLAVELAGDLLANPPDLKVEQPQTKGKKS
KVSTSRQTQVATNTLVKTSFLLTVLSERLELHNLAFSTGMFSLELQRPPASTKALEVKLA
YQESEVVALLKKIPLGLVEMTSIRDRAEQLRDGNFCDYRPVLPLMLASFIFDVLCTPVVS
PTGSRPPSRNRNNEMPGDEELGFEAAVAALGMKTTVSEAEHPLLCEGTRREKGDLALALM
ITYKDDQSKLKKILDKLLDRESQTHKPQTLSSFYSSKPAASSQRSPSKHAAHNAHGHGGA
TGGVSKHAPNATAAAGSSSVQPVAAGGAAGQLAGSGVQNNATPGEGVSEAREQADGAQPA
SCDQPSDAVPFKPEGTVPSRLALGGRGAYSGRCWGSPVRQKKKHTGMASIDSSAPETTSD
SSPTLSRRPLRGGWAAASWGRGQDSDSISSSSSDSLGSSSSSGSRRAGGGARAKSTDTSR
YKGRRPECHAPHVPNQPSEAAAHFYFELAKTVLIKAGGNSSTSIFTQPSASGGHQGPHRN
LHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQAMEIGSAALNILVECWDGHLTP
PEVASLADRASRARDPNMVRAAAELALSCLPHAHALNPNEIQRALVQCKEQVHVRYSSVL
QKTHRTTHDNVMLEKACMAVEEAAKGGGVYPEVLFEVAHQWYWLYEQTVGGGSGAQREGP
GRCRANGGAGRRPPETGHGVTDNSGNMESSGVATVTASVTAAAVVPVISVGSTIYQSHAL
PGSAMAHPHSQGLHPYTTIQAHLPTVCTPQYLGHPLQHVPRPTVFPLSGGAYPQCVCVPS
QGMHPAFIGAQYPFSVATGPHPPMAATAVTFPGIPVPSMTQIAVHPYHTETGLPLSTTVA
GATTFSSFYPVGGVHSGATIQAIQGSSLPGMSSQPVSLVSAPFPSEDEQHSQPISQQGLH
YLHSAYRVGMLALEMLGRRAHNDHPNNFSRSPPYTEDVKWLLGLAARLGVNYVYQFCVGA
AKGVLSPFVLQEIIMEALQRLNPAHIHAHLRTPAFHQLVQRCQQAYLQVAREGGGGEEGA
GGPRLVSPRRLLLTLRLSETDTTNRRDRHTDSTRGRLHGKKRANTVVLVPLDIPVDGHAS
DQHSRLLDPSFWFSCLTNLVR
NT seq
6006 nt
NT seq
+upstream
nt +downstream
nt
atggaactaatgttcgccgagtgggaagacggagaaaggttctccttcgaagattctgac
cggttcgaagaggactcgctctgctccttcatatcagaagctgagagtctgtgtcagaac
tggaggggatggagaaaacagtctggtggaccaaattctcctacagttaagattaaagat
ggtcaggtcattcctctggtggagctttcagccaagcaggtggcattccatatcccgttt
gaggtggtggagaaggtctatcctcctgtccctgagcagctgcagctacgcatcgcctac
tggagcttccctgagaacgaggaggacatccggctgtactcgtgtctggccaacggcagc
ccagatgagttccagcgaggggagcagctgtacaggatgagggctgttaaagaccctctg
cagataggtttccacctcagtgccaccgtggtatcgccccagactggccaatcaaaaggg
gcgtacaatgtggctgtcatgtttgaccgctgccgcattacctcctgcagttgcacctgc
ggggccggggccaagtggtgcgcccacgtggtggccctctgcctcttcaggatccacaac
gcgtctgcagtgtgcctgcgagcccccgtttcagagtccctgtcccggctgcagagggac
cagctgcagaagtttgcccagtacctaatcagcgagcttccccaacagattttgcccaca
gcccagaggctcctggatgagctcctgtcctcccagtccacagccatcaacacagtgtgt
ggggctccagaccccactgctggcccctcggcctctgaccagagcacttggtatctagat
gagtccacgctcagtgacaacatcaagaagacgctgcacaagttctgtggcccctctcct
gtggtcttcagtgacgtcaactccatgtacctgtcatccacggagccaccggctgcggca
gagtgggcatgtctgctgagacctctgagggggcgggagcctgaggggatctggaacctc
ctgtctatcgtcagggagatgttcaagaggagggacagcaacgctgcacctctacttgag
atcctcactgagcagtgtctcacttatgaacagattattggctggtggtacagcgtgcgt
acgtcggcgtcccacagcagtgccagcgggcacacggggcgcagtaacgggcagtcggag
gtggcagcccacgcctgcgccagcatgtgtgatgacatggtggttctgtggaggctggct
gtgctagaccctaccatgagccctcagaggcgtttggagctggcctcccagctcaagcag
tggcatctgaaagtgattgagattgtgaagcgagggcaacatcgcaagtccctggacaaa
ctgttccagggcttcaagccagccgtggagtcctgctacttcaactgggaggtggcctac
ccactgccaggcatcacctactgcagtgctgacaagaagagcgcctccttctgctgggcc
agggcagtgcagcagcagagaggggccaaggctggcctggctggagacacctctgaactt
ggaggaggaggggggagatctggcagctctgagggaggtgggggagactacaagggcaga
actccccaacaagaagtggctgtcaggcccaaagagaccattgtgagcaagaggaagggg
ttgtcggccgggagcggaggaggggtcctagtgcggctagggggcagtgtctgtctttct
ctagaggagggcagtagtaaggggatgtacaaaggcgcaggttcctcctcgtccattggg
ggcaaggctaagctggcccagggggggaagtcgtcctctgggggatcaggaggggtaggg
ggaaaacaccaagcggccaagcggcgcaccagcagtgaggacagctccctggagcctgat
atggccgagctgagcctggatgatggctccagtctggcgctgggcgccgaggccagtaac
acctttgacttcacacccccgccacccgagatgctaccctcaccaagcccgctactcaga
gagccacacaaatacagtgggggagggaaaggggccggaaacatgcccaaggagcgctcc
tttgaggtcaaacgtgtcactcttgctgccaccctgcctgccactgagtcccagcccgcc
ttccccctcaaggagaacgccgctgtcgtcgtggaagcggctgttgtcttggagaaggag
gtggaagtggaggcagagatggaggtgaatggaaataaggaggtggcccccgctggagac
gttcggctctccacctcggtcgctgttgttaccgtgactgctgctgccgccaagccaccg
cgtggtgggcgccgagaaactggcgctggagccgtagccctgcccaatcagagcccaagg
gcagggggagaccctgttggagaggatgactaccgggcctactacctaaatgcagcctct
gaggagggggcagagagagtgccagagaacaaccatgaggaggaaccagacatctttgct
gggatcaaaccgctggagcaggagggccagatggaggtgctgtttgcatgtgcagaggcc
ctccacgcccatggctacagcaacgaggcctgcagactggcagtggagctggctggagac
ctgctggccaaccctccagacctgaaggtggagcagccccagacaaagggtaaaaagagc
aaggtgtccaccagcaggcagacccaggtggccaccaacaccctggtcaagacctccttc
ctgctgacggtgctgagcgagaggctggagctccacaacctagcctttagcacgggtatg
ttctctctggagctgcagaggcccccagcctccaccaaggccctggaggtcaagctggcc
taccaggagtcagaggtggtggctctgctgaagaagatccctctgggcctggtggagatg
acgtccatacgggacagggccgagcagctccgagacgggaacttctgtgactacaggcct
gtcctgcccctcatgctggccagcttcatatttgatgtgctgtgtaccccagttgtctcc
cccacaggttcccgtcctcccagccgtaaccggaacaacgagatgcctggagacgaggag
ctgggctttgaggctgctgtcgcagcactgggtatgaagaccacagtgagcgaggcagag
caccctctgctgtgtgaggggaccaggagagagaaaggagacttggctctggctcttatg
atcacatacaaggatgaccagagcaagctgaaaaagatcctggacaagctgctggacaga
gagagccagacccacaagccccaaaccctgagttccttctactccagcaagccagctgcc
agcagccagaggagcccgtccaagcacgctgcacacaatgctcacggacacggaggtgcc
accggaggggtgtccaaacacgctccaaacgccacggctgcagctgggtcttcctctgtg
caaccggtggctgctggtggggcagcaggacaactggcgggcagcggtgtgcagaacaac
gccacacccggagagggcgtcagtgaggccagagaacaagcagatggcgcccagcctgcg
tcatgtgaccagccgagtgatgcggtcccattcaagcccgagggcactgtgcctagtcgc
ttggcgctgggaggacggggggcatacagcgggcgctgctggggctctcctgtccgccag
aagaagaaacacacaggcatggcgagtatcgacagcagtgctcctgagaccacctcagac
agctcccccaccctcagccgacgtccactcagagggggctgggctgcggcctcctggggg
aggggccaggacagtgacagcatcagcagctcttcctctgattcgctgggctcctcctca
tccagtggctctcgcagggccggagggggagctagggcaaagagcacagacaccagcagg
tataaagggcgtcgtcccgagtgccatgcaccccatgtgcccaaccagccatcggaggcg
gcggctcacttctactttgagctggccaagacggtgctgatcaaggccgggggcaacagc
tccacctccatcttcacccagccctcagccagcgggggccaccagggtccccaccgtaac
ttgcacctctgtgccttcgagattggcctgtacgccctgggcctgcacaactttgtctcg
cccaactggctatccaggacctactcctcccacgtctcctggatcacaggccaggccatg
gagattggcagtgctgccctcaacatcctggtggaatgctgggacgggcacctcacccct
cccgaggtggcatcactggcagacagggcatcacgggcacgggaccccaacatggttcgc
gctgcggccgagctggccctgagctgcctgccccatgcacacgccctcaaccccaatgag
atccagagggccctggtgcagtgcaaggaacaggtacatgtccggtactcttcagttctg
cagaagacacatcggactactcatgacaatgtgatgctagagaaagcctgtatggctgta
gaggaggcagcaaaggggggcggtgtgtaccctgaggttctgtttgaggtggcccaccag
tggtactggctctatgagcagacagtaggagggggctcaggggcccagcgcgagggcccg
ggacgctgcagggccaacggtggagctgggagaaggcccccggagactggtcacggtgtg
acggacaacagtggcaacatggagtcctctggtgttgccacagtgactgcctctgtgaca
gcagcggctgtggtgcccgtcatctctgtgggctccaccatctaccaatcacacgccctt
cctggctctgccatggcccacccccactcccagggcctgcatccctacactaccatccag
gcccacctgcccactgtctgcaccccccagtacctggggcacccgctgcagcacgtcccc
cggcccactgtgttccccttgtcagggggtgcgtacccacagtgtgtatgtgtgccctcc
cagggaatgcacccggcctttatcggtgcccagtacccgttctcagtggccaccggcccc
catccgcccatggcagcaactgcggtcaccttccctggtattcccgtgccgtccatgacc
cagatcgccgtccacccgtaccacactgagaccggcctgcctctgagcaccactgtagca
ggagccacgactttttcctctttctatccagtaggtggcgtccattcaggcgccacaatc
caggccattcaggggtcatctcttcctggtatgtcttcccagcccgtctcattggtcagc
gcccccttcccgtctgaagacgagcagcatagccagccaatcagccagcagggtcttcac
tacctgcactcagcctacagagttggcatgctggctttggagatgcttggaaggagggct
cacaacgaccaccccaataacttctcccgcagccccccatacacggaggatgtcaagtgg
ctcctgggcctggctgcacggctaggtgtgaactacgtgtaccagttctgtgtgggtgcg
gctaagggtgtgctcagccccttcgtccttcaggagatcatcatggaggcactccagaga
ctcaaccccgcccacatccatgcccacctccgcacgcccgccttccatcagcttgtgcag
cgctgccagcaggcctatctacaggtggcgagagagggcggcggaggagaagagggcgca
ggaggccctcgtctcgtctcgcctcgtagactgctgctcacgctgaggctttctgaaacc
gacacaaccaacaggagggacagacacacggacagcacacgaggacgtctccacggcaag
aagagagcaaacacagtggttctcgtccctcttgatattccagtagatggacatgcatct
gatcaacacagcaggcttctcgatccatccttttggttttcctgcctgaccaacctcgtt
agataa
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