Oncorhynchus masou masou (cherry salmon): 135512521
Help
Entry
135512521 CDS
T10723
Name
(RefSeq) vinculin-like isoform X1
KO
K05700
vinculin
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04510
Focal adhesion
omm04517
IgSF CAM signaling
omm04518
Integrin signaling
omm04519
Cadherin signaling
omm04520
Adherens junction
omm04810
Regulation of actin cytoskeleton
omm04820
Cytoskeleton in muscle cells
omm05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
135512521
04518 Integrin signaling
135512521
04519 Cadherin signaling
135512521
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135512521
04520 Adherens junction
135512521
09142 Cell motility
04820 Cytoskeleton in muscle cells
135512521
04810 Regulation of actin cytoskeleton
135512521
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
135512521
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omm04812
]
135512521
04147 Exosome [BR:
omm04147
]
135512521
Cytoskeleton proteins [BR:
omm04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
135512521
Exosome [BR:
omm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
135512521
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
ATPD_C_fung
Mob_Pre
HrpD6
NEMO
Motif
Other DBs
NCBI-GeneID:
135512521
NCBI-ProteinID:
XP_064790700
LinkDB
All DBs
Position
24:complement(67168378..67224335)
Genome browser
AA seq
1131 aa
AA seq
DB search
MPVFHTKTIEGILEPVAQQISHLVIMHEDGEVDGKAIPDLTGPVAAVQAAVSNLVRVGKE
TVQTTEDQVMKRDMPPAFIKVENACSKLVQAAQMLKADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLITYTKNLGPGMTKMSKMIEERQQ
ELTHQEHRQMLFNSLNTVKQLLPVLISAIKIFVATKSTHSAGVDEAERNRCFTFEKMSAE
ISEIIRVLQLTTWDEDTWANKDMECMKRSLSVIEAKMTMAKGWLKDSHGQPGEPGDVAVR
VILDEAGKVGELCAGRERRDTLGTAKTLGQMTDQVTELRVRGHGLSPPCVQRAGQCSQGL
DLLLGKVDGATRRLEALTKAKLAFARRLDTAQAWLADPNGGPESAENIRALLANAQKIAD
LCEDLLERDDIQRSINEIAGLTARLVELRKRGKGDSPEVRALCKLIGAALLTLQAKTNRA
VANMRPAKPAITLQGKMEQALRWVNNPGQDDRGVGQAGIRGLVSEGRRLAGGLGGPYRQD
MIVCCDRNEALMTSLADIAGRGEAEAPQAKATASQLQESLKDLKGRMQEVMTQEVSDVFS
DTTTPIKLLAVSATAPPEAPHREEVFDERAGNFEAHAGRLGATAEKAAAVGSANKNTVEG
IQATVKHTRELTPQVTSAARILLKNPGNQAAYEHFDTMKNQWIDNVEKLTGLVDEAIDTK
SLLDASEEAIKKDIDKCRVAIANVQPQMLVAGATSIARRANRVLLVAKREVENSEDPWFR
EAVKRASDILSHTISPMVIDAKAVAGNIQYPALQKAFLDSCLRILMAVGKVREAFSLPEP
DFPPPPPDLDKLHVSDQEQAPPKPPLPEGEVPPPRPPPPEEKERDKDEDFPEQKAGELLS
EPMMVAARQLHDEARKWSSKEGLPEEEEGVEVDDEDEFTDGEDDYEPELLMMPSNGNAVN
QPILAAAQSLHQEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRAMIQCAKDIA
KASDEVTRLAKEVAKQCTDRRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEE
SEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgccagtgttccacacgaagaccatcgagggtatccttgagccggtggcccagcagatc
tcccacctggtcatcatgcacgaggacggggaggtggacgggaaggccatcccggatctg
accggcccggtggccgcggtacaagcagcggtcagtaaccttgtcagggtgggaaaggag
actgttcagactacagaggaccaggtgatgaagagagacatgcctcccgccttcataaag
gtggagaatgcgtgttctaagctcgtgcaggcagctcagatgttgaaggcggatccctac
tcggtccctgccagagactacctcattgacggttccagaggaatcctgtctggaacctca
gacctgctgctcactttcgacgaagctgaggtgcgtaagatcattcgtgtgtgtaagggg
atcctggagtatttgactgtagctgaggttgtggagaccatggaggacctgatcacctac
accaagaacctaggaccaggtatgactaagatgtctaagatgattgaggagcgacagcag
gagttgacccatcaggaacacagacagatgctattcaactccctgaacactgtcaaacaa
ctactgcctgtactcatatcagccataaagatatttgtagcgactaagagcacgcatagt
gctggggtggatgaggcagagagaaacagatgctttacgtttgagaagatgagtgctgag
attagtgagatcatcagagtcctacagcttaccacctgggatgaagatacatgggccaac
aaggacatggagtgtatgaaacgttctctgtcggtgatagaggctaagatgaccatggcg
aaaggctggctcaaagactcccatggacaaccaggcgagcccggggatgtagcggtgcgt
gtgatattggatgaggcagggaaggtaggagaactgtgtgctggaagggaacgcagagac
acacttggaacagcaaagactctgggacagatgactgaccaggtcacagagctacgtgtc
agaggacatggtctgtctccaccatgtgttcagcgggccggtcagtgttctcagggtctg
gacctgctgcttgggaaagtggacggtgccacccgcaggctcgaggctttaactaaagct
aaactggcattcgctaggagactggatactgcccaggcatggctggcagatcctaatggg
ggtccagagagtgcagaaaacatcagagccttgctggccaatgcccaaaaaatcgctgac
ctgtgcgaagacctcctcgagagagacgacatccagagatccatcaatgagattgcgggg
ctcaccgcacgactagtggagctacgcaagcggggtaaaggggacagtccagaggtgcgt
gcactatgtaaactcattggagcagctctcctgaccctgcaggctaagaccaacagagcg
gtggccaacatgagacctgccaaaccagccatcactctgcaaggcaagatggagcaggcc
ctacgctgggtcaacaaccctggacaggatgacaggggtgtgggtcaggcaggaatccgg
ggcttggtatcggagggccgtcggttggctggagggcttggggggccgtaccggcaggac
atgattgtctgctgcgatcgcaacgaggcgctgatgacatcactggcagacatagcgggg
aggggagaggccgaagccccgcaggctaaagctactgcttcacaactacaggaaagtctg
aaggacttgaagggtcgtatgcaggaagtcatgacccaggaagtatccgatgtgttcagt
gacaccaccacccccattaaactactggctgtgtctgcgactgcccccccagaggccccg
cacagagaggaggtgtttgatgagcgtgctggtaactttgaggcccatgcgggtcgcctg
ggcgcaacagcggagaaggcggcggccgtgggatcagctaataaaaacacagttgaggga
atacaggctaccgttaaacacaccagagaactcactccacaggtgacctccgcagctcgt
atcctgttgaagaatccaggtaaccaggcggcctacgaacactttgacaccatgaagaac
cagtggatcgacaatgtagagaaactcactggtttggtggatgaagccatagacaccaag
tctctgctggatgcgtctgaggaggcgataaagaaggacatcgataagtgtcgtgtcgcc
atagcgaatgtacagccgcagatgctagttgccggggcgaccagcatagctcggcgagcc
aatcgcgtacttctggtagcgaagagagaggtggagaactcagaggacccatggttcaga
gaagcagtgaaacgtgcatcagatatacttagccacactatatcacctatggttatagac
gctaaggctgttgccggaaatatacagtacccagcccttcagaaggcctttttagattct
tgcctcagaattctgatggctgttgggaaggttagagaagccttcagcctcccggaacca
gacttcccccctccacccccagacctagacaagctacacgtgagtgatcaggagcaggcc
ccgcctaagccccccctaccagagggagaggtgcccccaccccgccccccaccaccagag
gagaaagagagagacaaagatgaagactttccagagcagaaggcaggagagctgctcagt
gagcccatgatggtggctgctaggcaactacacgatgaggcacgcaagtggtccagcaag
gaaggattgcctgaggaagaggagggtgtagaggtagatgatgaagacgagtttactgac
ggtgaggatgactatgagccagagctgttaatgatgccgtctaatggcaatgccgtaaat
caacccatcctagccgccgcacaatcgcttcatcaggaggcgcgcaagtggtccagcaag
ggaaatgacatcattgcggcggccaagaggatggcgttgctgatggctgagatgtcccgg
ttagtacgtggcggcagcggtaataagcgggctatgatccagtgtgctaaagacattgcc
aaagcctcggatgaggtcaccaggttggccaaagaggtggccaagcagtgtactgaccga
cgcatcagaaccaacctgctgcaggtgtgtgagcgtattcccaccatcagtactcagctg
aagatcctgtcaacagtcaaagccacaatgctgggacgaaccaatatcagcgaggaggag
tctgaacaagctacagagatgctggtccataatgcccagaacctgatgcagtcagtcaag
gagaccgtgagagaggccgaggctgcttcaatcaagatccgcaccgatgcaggcttcacc
ctgcgctgggtccgcaagaccccctggtaccagtaa
DBGET
integrated database retrieval system
