KEGG   Oncorhynchus masou masou (cherry salmon): 135512644
Entry
135512644         CDS       T10723                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4 isoform X1
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
omm  Oncorhynchus masou masou (cherry salmon)
Pathway
omm03018  RNA degradation
omm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:omm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    135512644
  09123 Folding, sorting and degradation
   03018 RNA degradation
    135512644
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:omm03019]
    135512644
   03041 Spliceosome [BR:omm03041]
    135512644
Messenger RNA biogenesis [BR:omm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     135512644
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     135512644
Spliceosome [BR:omm03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    135512644
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 135512644
NCBI-ProteinID: XP_064790950
LinkDB
Position
24:75252605..75263365
AA seq 147 aa
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVSKGRGRGGMQQNKQQGKGRGGGAGAGRGVFGGRGRG
MPGVGRGQQQQEKKPGGGKPQGVKNQH
NT seq 444 nt   +upstreamnt  +downstreamnt
atgctacctttatctctgctgaagactgcacagaaccaccctatgctggtggagttgaag
aatggagagacgtataacggacacttggtcagttgtgacaactggatgaatatcaactta
cgagaagtcatctgcacctcgagggatggagataagttttggaggatgccagagtgttac
atcagaggaagcaccataaagtacctgcgtatccctgatgaaatcatcgacatggtaaag
gaggaggtggtgtccaagggccgcgggcgaggaggcatgcagcagaacaaacagcagggc
aagggccgagggggaggagcaggagcaggtagaggtgtatttggaggccgtggccggggt
atgccaggagtgggcagaggccagcagcagcaggagaagaagcctggtggtggcaaacct
cagggagtcaagaaccagcactga

DBGET integrated database retrieval system