Oncorhynchus masou masou (cherry salmon): 135512854
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Entry
135512854 CDS
T10723
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03008
Ribosome biogenesis in eukaryotes
Brite
Ribosome biogenesis [BR:
omm03009
]
Eukaryotic type
Pre-60S particles
RNases
135512854
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GFIT
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NCBI-GeneID:
135512854
NCBI-ProteinID:
XP_064791371
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Position
24:83433911..83444479
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AA seq
1313 aa
AA seq
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MLRSTGFFRGIDCPFYTDSCNGKSGTYGCNRPYCHFRHSKHRRASYGSNDTRTSKELYSK
QKEQGGYDPFNPEVVRPEEQQNGEPAAATVDMGALELELVNRAIEAVRSEVEREKKKLSQ
IGDLEYDPSASSPKVLLKPLSQTGDQKYDPTASSPKLVPKPPSRSGDQEYDPTASSHKVM
ANWPKPQAVASHLAYDPGSYQMTTTADYNPTPRSSKYTLDSDSKDNHASSMEYVPTSVTK
TALKKPAPRTRSPHLPSPSTSPKYSNNAAFSKNKYTVDNSKPSTDMEYDPLSNYSAKIAV
KDKKDQRTGASKGEVKKRPHLSGTGKLSTDEEYVPTTKKPRQVIPDPLKYTASFSESDEE
SSGTEYRPTSLSRLQRRKSSSGSVEEASGPGKGERTERALGGLKQQRSLEAKEQEDSENQ
EVARQKDKPETEKVPGKTSHMKSIKVEKVHKSEKESSKKSGSSKEKGAGDSKKISDSKTS
SHETAKKDSKNQGKKEEEKTKIKDKSIDKGKEGQEEKRSDGKSKLRTDKVKGASSKSERE
KGGGDSKKLKTSDKEKDSSKFKEHKNGKHDSSGRERGSNKVSKGSSNSSKDKVKKNSRSF
LDGKTGKVKQRSLSHVDLFGDESAEEKREEDDDEEKIVRKSAAAFKRGHLNKRNASELTP
SSSEDDDVGPEDDRGYDDMDGGGVDYSGLQMDMDFDLDEDPMEECLRIFNESKDVKTEDK
GRQAKPSKDSDDEDATDSNQTTLFPGQKKRVSHFSAKGSTEATPKPPPYRRLTAQEICYQ
RMQIAQQQASQLAAAVKTASTPRPRPSLSPFPGERKRVAHRPTPLPSSSKSGLVEAKLAG
SRVLSPTRTLPGGVSVKAQTSAGILSKTTTTIAQKRVAHTPTMKSSAMKRPVIPTEFGAK
VPTNVRQRYLNNFIDECMKFCPSEDLAFQMALEEEKVVYDRSSSKNIYLNVAVNTLKKLR
SKSSSPTSPVARSPAVVGNRKAQSHEEVLGGRLAAKTSFTINRTGKQQEEKLSGVRLYRK
LRDYLMTEEQLQEHGYPRPHPERSGRAVVHNVPEKKNVDPFAKVCCRCGAEYKINANGNC
VRKEECNHHWGRLRRHKVSGGWETNYSCCSGTVGSPGCSVSKQHVQDGRKESLDGYVQTF
EKQLPPDGNGGVYALDCEMCYTKQGLELTRVTVINSELKVIYDTFVKPESKVVDYNTRFS
GVTEEDLENATITLRDVQAVILNMFSTESILIGHSLESDLFALKVIHSTVVDTAIVFPHR
LGLPYKRALRNLMADHLKRIIQDSVEGHDSSEDACACMELMIWKIREDAKVKR
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atgctgagatccaccggtttcttccgtggaattgactgcccgttttacacggatagctgc
aatgggaaaagcggcacatatgggtgcaacagaccatactgccacttcagacacagcaaa
catagacgtgcgtcttatggctcaaatgacactagaacatcaaaagaactttactccaaa
caaaaggagcaaggtggctatgacccattcaacccagaggtagtaagaccagaggagcaa
cagaatggggagcctgctgctgcaacagtggacatgggtgccctcgagcttgagttggtc
aatcgtgccatcgaggcggtacgcagtgaggtggagcgggaaaagaagaagctctcacaa
atcggggacctggaatatgacccttctgccagttctcctaaagtgttgctgaaaccactc
tcacaaactggagaccagaaatatgaccctactgccagttcccccaagctggtgccaaaa
ccaccatcacgatctggggaccaggaatatgatcctactgccagttcccacaaagtgatg
gctaactggccaaaaccacaggccgtggcatcccacttggcgtatgacccaggcagttat
cagatgactacaacagctgattataatcccacccctcgctccagtaagtacaccttggac
tctgacagcaaggacaaccatgccagctccatggaatatgtgcccacctcggttaccaaa
acagctctgaaaaagcctgctcctcgaacacgatctcctcatctaccctctccctctact
agtcctaagtactccaataatgcggccttctccaagaacaagtacacagtggataattct
aaaccatccacagacatggaatatgaccctctctccaactattcagctaaaattgctgtc
aaggataagaaagaccagaggacaggtgcttctaagggagaagtgaaaaaaagacctcac
ctgtcagggacaggaaagctgtcaacggatgaggaatatgtgccaactactaaaaagcct
cgacaggtgataccagacccactgaagtacactgccagtttctctgagtctgatgaggag
agctctgggacagagtatcgacccacctctctcagccgtctgcagaggaggaagagtagc
agtgggtcagtggaggaagcctctggtccagggaaaggagagaggactgaaagagctcta
ggtgggctgaaacaacagaggagtctggaggctaaagagcaggaagactcggagaaccag
gaagtagcaaggcaaaaagacaaaccagaaactgaaaaggtgccaggtaaaaccagccac
atgaagagcatcaaagtagagaaggtgcataaatctgaaaaggagtccagtaaaaagagt
ggtagtagtaaagaaaaaggagcaggggacagtaagaaaataagtgattcaaagacatca
agccacgaaactgcaaagaaggacagcaagaatcagggaaagaaagaagaggagaaaacc
aagataaaggataaatccatagacaaaggcaaggagggacaggaagaaaagagaagtgat
ggaaagagtaagctaaggacagacaaagtaaaaggggcgtcaagcaagagtgagagagaa
aaggggggtggggatagtaaaaaactgaagacttcagacaaggaaaaggactcttcaaag
tttaaagaacacaagaatggtaaacatgacagcagtggaagagaaaggggctccaataaa
gttagcaaagggagttctaacagcagtaaagacaaggtgaagaaaaacagcagaagcttc
ttggatggcaaaacaggaaaggtgaaacaaagatctctgagtcacgtggatctgtttggg
gatgagagtgcagaggagaaacgcgaggaggatgacgacgaggagaaaattgtgaggaag
tcagctgctgctttcaagagggggcatttgaataagaggaatgcctcagagctcaccccc
tcatcctcagaggatgatgacgttggtccagaggatgacagaggctatgatgacatggat
ggtggtggggtggactactccggtctacagatggacatggactttgacctggatgaagac
ccaatggaggagtgcttacggatcttcaatgaatccaaggatgtgaagaccgaggacaag
ggaaggcaagccaagccctctaaagattctgatgatgaggatgccacagacagcaatcaa
actactctctttcctgggcagaagaagagggtttcacatttctccgccaaaggaagtact
gaggcaacaccaaagcctccgccgtacaggagactgactgcccaggagatctgttaccag
cgcatgcagattgcccagcagcaggcctctcagcttgcagcagccgtgaagactgcctct
acacccagacccaggccaagcctcagccccttccctggggagaggaagagagtagcccac
cgccccaccccgttaccatcctcctccaagtctggtcttgtcgaggcaaagctagcaggc
agcagagtgttgtcgcccaccaggactctcccaggtggtgtctctgtgaaggcccagaca
tcagccggcatcttgtcaaagaccaccaccactattgcacagaagagggtggcacacact
cccacaatgaagagctctgcaatgaagcgcccagtgattcccactgagtttggagccaaa
gtgcccaccaacgtccgccagcgatacctcaacaactttatagatgagtgtatgaagttt
tgcccctctgaagacttggccttccaaatggccctggaggaggagaaggtggtgtatgac
cggagcagcagtaagaacatctacctcaacgtggcagtcaacacactgaagaagctacgc
agcaagagcagctcccccacctcacccgttgccaggagccctgcagtggtggggaacagg
aaggcccagtcccatgaggaagtgctggggggacgcctcgctgccaagaccagcttcacc
atcaacaggactggcaagcaacaggaggagaaactcagtggtgtcaggctgtacaggaag
ctgagggactatctgatgacggaggagcagctgcaggagcatggataccccaggccacac
cctgagcgctcaggtcgagccgtggtccacaacgtcccggaaaagaagaatgttgaccct
tttgccaaggtgtgctgtcgatgtggggccgagtataagatcaacgccaacggcaactgt
gttcgcaaggaggagtgtaatcatcactggggccgtctgcgcagacataaagtgtcggga
ggctgggagaccaactacagctgctgctcagggactgtgggctctcctggctgctctgtg
tctaagcaacacgttcaggacggacgcaaagaatcattggacggctatgttcagaccttt
gagaaacagctgcccccagacggcaacggtggagtctacgccctggactgtgagatgtgt
tacacaaagcagggtctggagctgaccagggtgactgttatcaactctgagctgaaagtc
atctatgacacatttgtcaaacccgaaagcaaagtggttgactacaacacacggttttcg
ggtgtaacagaggaggacctggagaatgcgaccatcaccctgagagacgtgcaggctgtg
atcctcaacatgttcagcactgagtccatcctcataggacacagcctggagagtgacctc
tttgccctcaaggtcatacacagcactgtagtggacacagccattgtgtttccccatcgc
ctgggcttgccatacaagagggccctgaggaacctcatggcagaccacctcaaacgcatc
atacaggacagcgttgaaggtcatgactccagtgaggacgcctgcgcctgcatggagctc
atgatatggaagatccgagaagacgccaaggtgaagagatga
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