Oncorhynchus masou masou (cherry salmon): 135512905
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Entry
135512905 CDS
T10723
Name
(RefSeq) probable voltage-dependent R-type calcium channel subunit alpha-1E
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04010
MAPK signaling pathway
omm04020
Calcium signaling pathway
Brite
Ion channels [BR:
omm04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
135512905
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
135512905
NCBI-ProteinID:
XP_064791476
LinkDB
All DBs
Position
24:complement(86285830..86451123)
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AA seq
2489 aa
AA seq
DB search
MLELGSCSVSAQTLADHNALAVPHLARGGVCGSSNPHQYILHPESENWRKHRLGLTEGSH
SCSLLEPQSLSDSLLSHTSSFNTLYLPHNAHAPHGLSLDVASSYDRAGEALVMDPDRPVS
PIVIKRRRGGLIEQRDIVKAHQAHKIQSTPQALRKEWEMARFGDDVPGLLGSGDGGSERN
RTREGPALSTGGGVSPAFKQTKAQRARTMALYNPIPVRQNCFTVNRSLFIFGEDNIVRKY
AKKVIEWPPFEYMILATIIANCIVLALEQHLPGEDKTPMSKRLEKTEPYFIGMFCFEAGI
KVVALGFVFHKGSYLRNGWNVMDFIVVLSGILATAGAHMNIPVDLRTLRAVRVLRPLKLV
SGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYSGKLHNTCLPMPNILENE
TVDKSESEFPCGVRKCPDKYACSETWIGPNDGITQFDNILFAVLTVFQCITMEGWTTVLY
NTNDALGPTWNCMYFIPLIIIGSFFVLNLVLGVLSGEFAKERERVENRRAFMKLRRQQQI
ERELNGYRAWIDRAEEVMLAEENKNLGPSALDVLKRTTIKRRGVDAVHRGPEEEQYGDIS
SVGIPMTRASIRSAKRGPTAYFKRKERLLRISIRRMVKTHTFYWTVLGLVALNTLCVAIV
HHNQPHWLSVFLYYAEFLFLGLFLTEMGLKMYSLGPRLYFHSAFNRFDCGVIVGSIFEVM
WGFFRPDMSFGISVLRALRLLRIFKITKYWASLRNLVVSLMNSMKSIISLIFLLFLFILV
FALLGMQLFGGRFIFEDYTPTNFDTFPAAIMTVFQILTGEDWNEVMYNGIRSQGGVKSGM
WSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEDEEAAFNQKHALQKAKEVGA
MSSLMSSHRRRRPYLYRKRAIHRSRPAYSLEEAESLAEGPPCPPLNSSNSFMSRGERRRR
MTMSVWEQRTSQLRRHRQMSSREILFSSPSEEQEAPPGCPHNLKATGTPTGSLKLADPTA
DPTAFTAQPPKPMDQTLEEPPLSMGVLEAPLSVPLAEPPIPIDSPLPDPPTSTVVTIPEP
TESEPCPEGQLDDTDHCHPGLNGRRSPRLNGERRQRAVRKFRPPAGDTLTPDMAGMRLRR
PRGTGHHEAQVGARGLDSPQGEGSSRSVSKERKTPEERQDKERRACNTGETSQPSETREA
EHRQGDPNQAGGPELQNREEGPQSEPPPIQPFQAAVPELPEGQTRDSDTSNNATTLIQDK
SPLSSSIYIEVTNVQSSLELTPITGNSKDMEASKPEKEEEQLTSPANIVTPDSMFIFKPG
NPIRRACHYVVNLRYFETCILLVIAASSIALAAEDPVSATSNWNKVLRYFDYVFTGVFTF
EMIIKMIDQGLILHDGSYFRDLWNILDFIVVVGALVAFALTNVLGNNKGRDIKTIKSLRV
LRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFFYCT
DGSKDTEKDCQGFYIDYEKDKKEVKRRDWRRHDFHYDNIVWALLTLFTVSTGEGWPQVLQ
HSVDVTEEDRGPSRGNRMEMSIFYVIYFVVFPFFFVNIFVALIIITFQEQGDKMMEECSL
EKNERACIDFAISAKPLTRYMPQNRQTFQYRLWHFVVSPSFEYTVLAMIALNTIVLMMKY
YSAPPAYEAVLKHLNTAFTVLFSVECVLKIMAFGFLNYFRDTWNIFDFITVLGSITEIVV
DLQSIETFNMGFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYA
IIGMQVFGNIRLDEETHINQHNNFKTFFGALMLLFRSATGESWQEIMLSCLGGQKCEPDP
LALTSNHEERCGTEFAYFYFVSFIFFSSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDE
FVRIWGEYDRAACGRMHYKEMYKVVRTISPPLGFGKNCPYRVAYKRLVLMNMPVDEEMSV
HFTSTLMALIRTALEVKIARGGEDRGLMDSDLQKEISVIWSHLSQKTLDLLVPIHKASHM
TIGKIYAAMMIMDYYKQSKAKKLRQQLEEQKHAPMFQRMDASSLPQEILCSAKALPFLPH
SPGSALTRGGFVALSPISPQEMFMQPMSQDLEDREEDYHNYHHHHLLHHQLHTLVPERKE
FNRNLCPTNRQDDPLRVPGRAVSIRASSMPRLAVDTQVGTDSSKSMKRSFSTIGDQCVNG
LWQEEYSLKRVSPDCLNRPRQRSIRGIRCNLREPVDHERGRSKERRHLLSPDVSRCNSEE
RSQDPSQERKQSRSPSDGRTHALHRQGNTSGSPDLSSTPRGRRQLPQTPLRPRPHISYSP
LVCRAHLSPPAASEGRARTQEAPGEMDDPSLREEGERLAPESGAGVGIGLGGAGLGVSHP
HPSPHRYISEPYLTLHEELHSPDSSGLDETLTFEAAIATSLGRANTISSAPQLRHNWQVP
NGHFHKRLGQASSVVACELLSDTDEDDRC
NT seq
7470 nt
NT seq
+upstream
nt +downstream
nt
atgttggaattgggctcctgttcagtcagtgctcagaccctggcagaccacaatgccctg
gcggtgccccatctggccagggggggcgtctgtgggagcagcaacccacaccaatacatc
ctccaccccgagtcagagaactggcgcaagcaccgtctgggcctgaccgagggttcccac
tcctgctccctgctggaaccccagagcctgtcagacagcctgctttcccacacatccagc
ttcaacaccctctacctcccccacaatgctcatgccccccatggcctctccctggatgtg
gccagctcctacgacagggccggggaagcgctggtgatggacccggaccgacccgtcagc
cccatcgtcattaaaaggcgccgggggggtctcatcgagcagcgggacattgttaaagcc
caccaggctcacaagattcagagcaccccacaggccctgcgcaaagaatgggaaatggcc
cggttcggagacgacgtccccggcttgttgggctctggggatgggggctctgagcgcaac
aggacccgggagggaccggctctgtcgacaggtggtggagtgtcccctgccttcaaacag
accaaggcgcagagagcccgcaccatggccctgtacaaccccatccctgtcagacagaac
tgtttcaccgtaaatagatcactcttcattttcggagaggacaacattgttcggaagtac
gcaaagaaggtcatagagtggcctccgtttgagtacatgattttagccaccatcatcgcc
aactgtattgtactggctttggagcagcacctgcctggagaggacaagactcccatgtcc
aagagactggaaaagacagagccttacttcattgggatgttctgctttgaagctgggatt
aaggttgtggcgttgggatttgtattccataaaggatcctacttgaggaacggctggaac
gtcatggacttcattgtggttctgagtgggattctggccacagcgggagctcacatgaac
atcccagtggacctgcggaccctgcgggccgtacgcgtgctcagacccctcaaactggtc
tctggaatccccagcctgcagatagtcctgaaatccatcatgaaagccatggtgccgctg
ctccagatcggcctgctgctcttctttgccattctcatgtttgccatcatcggcctagag
ttctacagcggaaagctccacaacacctgtctgcccatgccaaatatcctggagaatgag
acggtggacaagtcggagtcagagttcccgtgtggggtgaggaagtgccctgacaagtac
gcctgcagtgaaacctggatcggccccaacgatggcatcacccagtttgacaacatcctg
tttgctgtgctcaccgtcttccagtgcatcaccatggagggctggaccaccgtgctctac
aataccaacgatgccttaggccccacgtggaactgcatgtacttcatccctctgataatc
atcggctccttcttcgtgctgaacctggttttgggagttctctcaggggagtttgccaag
gagagggagcgggtagaaaaccgcagggcattcatgaagctccggaggcaacagcaaatt
gagcgggaactcaatggctaccgagcctggatcgacagagcagaagaggtgatgcttgca
gaggagaataagaatttaggaccttctgctcttgatgtgctgaagaggaccaccatcaag
aggagaggggtggatgccgtccatcggggcccagaggaggagcagtacggtgacatctct
tctgtgggcatcccgatgaccagagccagcatcaggagtgctaagagaggacccacggct
tatttcaagcgaaaggagcgtctgctgcgtatctctatccgccgcatggtgaagacacac
accttctactggaccgtactgggcctggtggccctcaacacactctgtgtggccatcgtc
catcacaaccagccccactggctgtctgtgttcctctactatgcagagtttctcttcctg
ggtctgtttctcactgagatgggtttaaagatgtacagcctgggacccagactctacttc
cactccgccttcaaccgcttcgactgcggcgtgatagtgggcagcatctttgaggtgatg
tgggggttcttcaggcctgacatgtccttcggcatcagtgtgctgcgcgccctccgtctg
ctgaggatattcaagatcaccaagtactgggcgtcgctgaggaacctggtggtatccctg
atgaattctatgaagtccatcatcagcctcatcttcctcctcttcctcttcatcctggtc
tttgctctgctgggcatgcagctattcggcggcaggttcatctttgaagactacactcct
acaaactttgacacatttcctgctgccatcatgactgtctttcagatcctgacaggagaa
gactggaatgaggtgatgtacaatgggatccgctcccagggaggagtgaagtcaggaatg
tggtcctccatatacttcattgtgctcacactctttggtaactacacactgctgaatgtc
ttcttggccattgctgtggacaatctggctaatgcccaggaactaaccaaggacgaagag
gatgaagaggctgctttcaatcagaaacatgctctccaaaaagccaaggaagttggggcc
atgtcttccctgatgtcatcacacaggaggaggagaccttacctgtacaggaaaagagcg
atacacaggagccggcctgcctactctctggaggaggctgagagcctcgccgaggggccc
ccctgcccgccactgaattcctctaactctttcatgtccaggggagagaggagaagacgg
atgaccatgtctgtgtgggagcagagaaccagccaactgcgcaggcaccggcagatgtcc
agccgagagatcctcttcagcagccccagtgaggagcaggaagcgccccctggatgcccc
cacaacctcaaagccacaggcacacccacaggcagcctgaagctggctgaccccacggct
gaccctacggccttcacagctcagccccccaagcccatggaccaaactctagaggagcca
cccctgtccatgggggtccttgaggcccccttgtccgtccctttagcagagccacccata
cccatcgacagtcccctgcctgacccccccacgtccacagttgtgaccattccggagcca
actgaatctgagccatgcccagagggccagcttgatgacaccgaccactgccacccaggt
ctcaatggccgcaggagccccaggttaaatggggagagaaggcagagagcagtgcgtaag
ttccgccctcctgctggtgacaccctgacccctgacatggcagggatgaggctcaggagg
ccaaggggcacagggcaccacgaagcccaggttggggctagaggcctggactcaccccag
ggggaggggagcagtcgctctgtcagcaaggagaggaagaccccagaggaacgacaggac
aaggagaggagagcctgtaacacgggagagaccagccagccttctgagaccagagaagct
gaacacagacagggtgaccctaaccaggctgggggtcctgagctgcagaacagggaggag
ggtccacagtcagaaccaccccccattcagccatttcaggctgcagtaccggagctccca
gagggccaaacaagagacagtgatactagtaacaacgccaccactctgatccaggataag
tcccctctgagctccagtatctacatagaggtgaccaatgttcagtcttcactagagctc
acccccatcacaggtaacagtaaagacatggaggcgtccaagcctgagaaagaggaggag
cagttgaccagcccagccaatattgtcacgcctgacagcatgttcatcttcaaacctggc
aacccgatccgccgggcctgtcactatgtggtgaacctgcgttactttgagacatgcatc
ctgctggtgatcgctgccagcagtatcgccctggctgcagaggaccccgtgtcagccacc
tctaactggaacaaagttttgcgttactttgactacgtgttcacaggtgtctttacattt
gaaatgataataaagatgatagaccagggcttgattctccatgacggctcctatttccgg
gacctgtggaacattctagactttatcgtggtggtcggagctctggtggccttcgccctc
acgaatgtgttgggaaataataaaggacgggacatcaaaaccatcaagtctcttcgggtc
ctgcgtgtcctgaggcccctgaagaccatcaagagactaccgaaacttaaggcagtgttt
gactgtgtggtgacctctctgaagaacgtcttcaacatcctcatcgtctacaagctcttc
atgttcatcttcgctgtcatcgctgtgcagctgttcaaagggaagttcttctactgcaca
gacggatccaaagacacagagaaggactgccaaggcttctacattgactatgagaaggat
aaaaaggaagtgaagagaagggattggaggagacatgacttccactatgacaacatagtc
tgggccctactcactctgtttactgtctccactggggagggctggccacaggtcctgcag
cactctgtggacgtgacagaggaggacagaggtcccagcaggggcaacaggatggagatg
tccatattctatgtcatctactttgtggtcttccccttcttcttcgtcaacatctttgtg
gctctcatcatcatcaccttccaggagcagggagacaagatgatggaggaatgcagcttg
gagaagaatgagagggcttgcattgactttgccataagtgccaaacccctgacccgctac
atgcctcagaacaggcagacgttccagtaccgcctctggcactttgtggtctccccctcc
ttcgaatacactgtgctggccatgattgcactcaacaccattgtcctgatgatgaagtat
tactctgccccaccagcatacgaggctgtgctgaaacacctgaacacagctttcactgtg
ctcttctctgtggagtgtgtcctcaagatcatggcctttggctttctgaactactttcga
gacacttggaatatattcgacttcatcacagttttgggaagcatcacagaaatagtggta
gacttgcagtcaattgagaccttcaacatgggtttcctgaagctgttccgtgcagccaga
ctgatcaagctgttgaggcagggttacaccatccgcatcctgctctggacctttgtccag
tcctttaaggctctcccctacgtttgtctgctcattgccatgctctttttcatatatgcc
atcatcggaatgcaggtttttggaaacatcagactggatgaggagactcacatcaaccaa
cacaacaacttcaagaccttttttggtgctctgatgttgctattcaggagtgccacgggg
gagtcgtggcaggagatcatgctgtcatgtttaggggggcagaagtgtgagccagacccc
ttagctctaacatcaaaccacgaggagcgctgtggaactgagtttgcctacttctacttt
gtctccttcatcttcttcagttcatttctgatgctgaatctgtttgtggctgtaatcatg
gacaactttgaatacctcacccgggattcctcgatattggggcctcaccacctggatgaa
tttgttcgtatctggggtgaatatgaccgagctgcttgtggaaggatgcactataaggag
atgtacaaagtagtgcgcactatttcacctcccctgggctttggaaagaactgcccctac
agggtggcctacaagaggctggtgctaatgaacatgcctgtggatgaagagatgtcggtt
cacttcacctccaccctcatggccctgatccgaaccgccctcgaggtgaagatagccaga
ggaggggaggaccgaggtctgatggattcagatctacagaaggagataagtgtcatttgg
tcacacctttcacagaagaccctggacctgctcgtccccatccacaaagccagtcatatg
accattgggaagatctatgcagccatgatgatcatggactactacaagcagagcaaagcc
aagaagctcaggcaacagctggaggagcagaaacacgctcccatgttccagcgtatggac
gcgtcctctctgcctcaagagatcctctgcagtgccaaagccctccctttcctgccacac
agccctggatctgccctgaccagaggaggatttgtggccttgagtcccatatcccctcag
gagatgttcatgcagcccatgtcccaggacctagaggacagagaggaggactaccacaac
tatcaccaccaccacctgctccaccaccagctccacacactggttccggagcgcaaagag
tttaaccgcaacctttgccccactaacaggcaggatgacccactcagggtgcccgggcgg
gcagtctctatccgagcctcctctatgcctcggctggctgtagacacacaggtggggaca
gacagcagcaaatcaatgaagcgctccttctccactattggggatcaatgtgtgaatggc
ctgtggcaggaggagtactctctgaagagggtcagtcctgactgtctgaacagaccacga
cagaggagcatcagaggaatcaggtgcaacctcagggaaccagtagatcatgagcggggg
cgctccaaagagaggcgtcacctgctgtctcccgacgtgtcccgctgcaactctgaggag
cggagccaggacccgtcacaagaacgcaagcagtcccgttcccccagcgatggacgcaca
catgccctccacagacagggcaacacttcaggcagcccagacctgtctagcacaccccgc
ggccggcgccagctcccccagacgcccttgcggccacgccctcacatctcctactccccc
ctggtgtgccgagcccacctctccccccctgctgccagtgagggcagagcccggacccag
gaggcccccggagagatggacgatccctcgttgcgggaggagggggagaggctagcccca
gagtcaggagcgggggtgggaatagggttgggtggcgcagggttaggggtcagtcacccg
cacccctcacctcaccggtacatctcggagccgtacctgaccctgcacgaggagttacac
agcccagactcctcaggcctggatgagactctgaccttcgaggcggccattgcaaccagt
ctgggccgggccaacaccatcagctctgccccccagctcagacacaactggcaggtcccc
aacggacacttccataaacgcctgggtcaggccagctctgtggttgcctgcgagctcttg
agtgacacggacgaggatgaccgctgttag
DBGET
integrated database retrieval system
