Oncorhynchus masou masou (cherry salmon): 135512913
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Entry
135512913 CDS
T10723
Name
(RefSeq) interferon regulatory factor 4-like isoform X1
KO
K09445
interferon regulatory factor 4
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135512913
Transcription factors [BR:
omm03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
135512913
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
MH2
Beta-lactamase
Motif
Other DBs
NCBI-GeneID:
135512913
NCBI-ProteinID:
XP_064791492
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Position
3:complement(22533746..22543291)
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AA seq
490 aa
AA seq
DB search
MSLLFRDAPMVREMNFEGDSGLSVICGNGKLRQWLIDQIDSSIYPGLVWENEEKSIFRIP
WKHAGKQDYNRDEDAALFKAWALFKGKHREGVDKPDPPTWKTRLRCALNKSNDFDELVER
SQLDISDPFKVYRIIPEGAKRGIKMAETTSHMSSVNSYPMHSLYPSLQSQVSGGFIIPQE
RKEWRDYSHALDQPQLHQPPHTELQYSQCHYPQPLSRPWHTGPHTDNGYQFTGSFCSYSS
SESHPTAFKMDHNMSTLSDFRLHVSLFYRESLVKKVTTSSPEGCRITSSSSSSSSPSSLC
HEDRLYSGAETVQFPSPYPQSQRRGAEKLPNVLERGVLLWMTLDGLYAKRLCQSRVYWEG
PLAPYTDKPNKLEKEQTCKLFDTQQFLTELQGYAHHGRPMPRHQVVLCFGDEYPDPQRQA
KMITAQVEPMFARGMIYFSQQSSSHCLRDYELQGHTEISLPAPGDYQRTLQQSSPLAPGD
YQRTLQHMQE
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtcattacttttcagagacgctcccatggttagagagatgaacttcgagggggacagc
ggcctgtcagtgatttgtggaaatgggaaacttagacagtggctgatcgatcagattgac
agcagcatctatcccggactggtttgggagaatgaagagaaaagcattttcaggattccg
tggaaacatgcgggcaaacaggattacaatcgtgacgaggatgctgcactcttcaaggcc
tgggcattgttcaaagggaaacatagggaaggagtggacaaaccagacccccccacatgg
aagaccagactgcgatgtgctctgaacaaaagcaatgactttgatgagctggtggagcga
agccaactggacatatccgatcctttcaaagtctacagaatcataccggagggagctaag
agagggatcaagatggcagagacaacgtcccacatgagctcagtcaacagctaccctatg
cactctctatacccatctctacagagccaggtgtctggcggattcatcattcctcaggag
aggaaggagtggagggattacagccacgcactagaccagcctcagcttcaccagccaccc
cacactgagctgcagtacagccagtgccactacccacagccactcagccgaccctggcac
accgggccacacacagataacggttatcagtttactggctccttctgttcctactcttcc
tcagagtctcaccccacagcatttaaaatggaccacaacatgtctaccctttctgacttc
cgactgcacgtatccctgttctaccgtgagtctctggtcaagaaggtaaccacctctagt
cctgaaggctgccggatcacctcttcttcctcctcatcttcctctccgtcctccctctgc
cacgaggacaggctgtacagtggtgcagagacagtgcagttcccctccccttacccccag
tctcagaggagaggggcagagaagctacccaacgtcctggagaggggcgtgctcctgtgg
atgacgttagatgggctctatgccaagcggctgtgccagagccgagtgtactgggaaggc
ccgctggcaccctacacggacaaacccaataaattggagaaagaacagacctgcaagctg
tttgacacccagcagttcctcactgagctgcagggttatgcccaccatggccgtcccatg
cccaggcaccaggtggtgctgtgtttcggagacgagtacccggacccccagcgccaggcc
aagatgatcacagcacaggtggagcccatgtttgccaggggcatgatatacttcagccag
cagagcagcagtcactgcctgagggactatgagctacagggacacacagagatctccctt
ccggctccaggagactaccagaggaccctgcaacagagctcccctctagctccaggagac
taccagaggaccctgcaacacatgcaggagtaa
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