Oncorhynchus masou masou (cherry salmon): 135513031
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Entry
135513031 CDS
T10723
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoprotein TPR-like
KO
K09291
nucleoprotein TPR
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135513031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135513031
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135513031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
135513031
NCBI-ProteinID:
XP_064791755
LinkDB
All DBs
Position
24:complement(92343930..92388237)
Genome browser
AA seq
2359 aa
AA seq
DB search
MATVLLQALERAEIAKLPKAVQNKLEKLFSDLQYEIDCLKSHQEQFRVDSEQQFFEKVQR
LEQSQEQFVTQTEQHHKLREEFTKIDEELKSVLEKNKEYEINQEKLTSEQAQLCKAKNEL
EAEKRELVRTLERRSQEVAYLSEDLQRLNDKVAEVNASKMGLQLKLDELESSEVNIKYRE
KRMEQEKELLRGQTAWLNAELKAKSEELLALSRQKGNQILELKCSLENKEDELNRVQDQV
TSLKTSNEGLQKQAEDIINKLKEDKEQQASMEEKFRNELNANIKLSNLYKGAAADSESKS
EELSGAVEELHKLLKDAGEANKALEVRLQEMDDCRDNEAAALKERIINLEKELENANELL
SDTKLRGSAGAASVLSEETITTMSPTAVAVAKIVKPGMKLTELYTAYVETQEALQLERVE
NKRVNKYLDDIVQEVEAKGPILKRQRDEHERMQKSVASLSSKLEQAVKEVHRLQKVTDEA
NKRSSVLERDNQRSDVQLADMGQQIRVLLIELEEARGNHVAHDEEVSSADISSTSEVITQ
HLVTFRGVEELQQQNQRLLVALRELSEAQESEEEETTGTKCSELERSLEKAQAELEALRE
QRSHQMQLAESIVRQRDMYRVLLAQATGVSFPQQGAAAAEEFSSTPRRSPAATPTTPTGI
ITMATESTEVVEAKAALRQLQEVFSSYKRERSESDKALMEQSEKLQKQVSDQRFQNAKIS
TQLEFTSKRYEMLQDNIKGYRKEIASLMEKGQKMAAVAQKCEQTVHTMTQDLRVAQEKLN
MAEGRAESLRKEREMLKLVESRLTQEKETMQTQQRGQNMLLTNLKTIEATLERSETDTRQ
RLNAQIEKQEREIGQLQKRLEHEVEQRHLLSRNQDLQLMDAKRQLETQTALLLKTRDQLS
AAQLEVSSLRLQQGSGEGGRLSLSSPSTPMGIRGFQVSEGESEDLHGRLKQAETRAEELT
EQLRTATSSMELYRAMAQSLEESLDKEMQVTEQARSAIEERVKEAQEQHRQLEKKLLEAE
NEKQGLQEEKMKALASVEQQVAVLRRSLSSVQADHQEALQMAAVAAAQEQQAMLDSQEQA
KLASEAQDKYEREMMLHAADVESLQAAKAQALQAATLRQQLEERAQRASAQLLEVRVSWE
EQERILKEEMSKVVSRSEELQRQNILLHEQIQTMSCKMAATLQRQANESPLNISLTEEGK
SQDQVLEILRFVRREKEIAESRFEVAQGESLRHRLRVEHLERELRELQDSLSAERERMQV
TAKTLAKHDELMKKTETMSVLMETNKMLREEKERMEQELQQTQAKVRKLESDIMPMQESN
AELSEKSGMLQAEKRILEEDIKRWKARTQHLVSQQKDTDPEEYKRLHSEKEAHLKRIQQL
TEETGRLKAEVARSGGSVTSLQSQVQMLREGLGKVSSDRDDLRRSMEAKNLDIQEKFRTI
TQVKKIGRRYKTQYEELKVEHDKMVFEAASTPAQEHEAQQASAQELQGLKDSLGQAETRT
KDLEGQLDNLNKVVGEREAEVRGSQEQASRLQTELTRLRQELQEKASQEDTLRQQMAEKE
EKTRKAFVGAKQRINQLMGSKDQLQKENEELKQQREELEVRVSALKSQYEGRLSRQEREL
RDLREQQERHGEQRDEALEQGPSKAQEQQRTTEQRGPLKTTQAADRGSTSTSEPPTANIK
PTPLGAQGPSKPPAIPGNKPTPRASIRPMITPATVPTPTPTATVMPTTQVENQEAMQSSE
APPEHVTVYGSASGSVRSTSPNVQTTNPMLVVQQTQTQTTAFVQPTQQQSLPHTEPTNQE
QPPAPVIEAAPSSQMERPSTSTAVFGTVSATPGTSSMSKRPREEEQDSSMVADXPQEDPS
EPPIPKKLRIIQRVDPEEPEAQDEVLAEGSAEGLVPGESQEAPETSQVVEEYPVLEEAEE
GAASQSVPVELLLSETAFISFSYDANEEPPQHDVIVIVTDSESEDEQQEEEDEEEEPDYD
DEEEDDDEEEEDEDDGGMGDEGEESNEGSRDGNEAYEGDDTEGPDGTDPGTETEESLGAS
DSTQRPADSQTHSFEGSSSMEAFSSDPTSSAPRMHQSPRRAPHPLPPHLNITQEGGPPAQ
RPMRRQSVGRVPQLTPGMASGGQHFFDDDDRMVPSTPTLVAPHRSDSFAEAIHSPQVAGV
PRFRFGTPEDLMPQTTTSHSDLGHLASQGGLGMYDSPLFLPGHEDESGGLSVPTTPLQVA
APVSIFAEVPPSDGTEHTSQSVPMVTTSTPGLVVAEGPSPGDERDDVFMAPGGDLVEVSL
EPVISRAGEIEEPTQVSDDCGLPSTSQELSSSSADTRRTQPKPSRPGHSRQLQRWTENRM
RRGTLPSRGVTGTGRRFAR
NT seq
7080 nt
NT seq
+upstream
nt +downstream
nt
atggctacagtgctacttcaagcgttggagcgcgctgagatagcgaagctaccaaaagct
gttcaaaataaactagaaaagttattttctgatctgcaatatgaaatagattgcctcaag
tcacaccaggagcaatttagagtcgatagcgaacaacagttctttgagaaagtgcaacgt
cttgaacagagtcaggaacagtttgtgacccagactgaacagcaccacaaactccgagag
gagttcaccaagatcgatgaagaactcaagagtgtactagaaaagaataaagagtatgaa
atcaaccaagagaagttgacatctgaacaggcccagctctgtaaagccaaaaatgaactg
gaggcagagaagcgggagcttgtgcgtacattggagaggagatcccaggaagtggcctat
ctgagtgaggacctgcagcgcctcaatgacaaagtggcggaagtcaatgcctcaaagatg
gggctgcagctcaagttggatgagcttgaatcctcagaggtcaacatcaagtaccgtgag
aagcgtatggagcaggaaaaggaactgttgcgaggccagactgcctggctgaatgcagag
ctcaaggctaaaagtgaggagctgctggctctttcacgccagaagggcaaccagatcctg
gagctgaagtgcagcttggagaacaaagaggatgagttgaacagagtccaggaccaagtg
accagtttgaagacttcaaatgaaggccttcagaagcaggctgaagacataatcaacaaa
ctgaaagaggataaggagcagcaggctagcatggaggagaagtttagaaacgagctgaat
gccaacataaagctctccaacttgtacaagggagctgctgcagactctgagtccaagagt
gaggaattgagtggggctgtagaggagctgcacaagctgctgaaagatgctggagaggcg
aacaaggccctagaggtgaggttgcaggagatggatgactgtcgggacaatgaggctgct
gcgctgaaggagaggatcatcaatttggaaaaagaactggagaacgccaacgaactgctg
tccgacaccaagctcagaggctctgccggtgcagcctcagtgctgtcagaggaaacgatt
accaccatgtccccgactgcagtcgccgttgccaagatagtcaaacctggcatgaagctg
actgagttgtacacagcatatgtggagacccaggaggcactgcagctggagcgtgtggag
aacaagcgggtgaataagtacttggatgacatagtgcaggaggtggaggctaagggtccc
atcctcaaacgccagagggatgagcatgagcgtatgcagaaatctgtggccagcctttca
tccaagctggaacaggcagttaaggaggttcaccgtctgcagaaggtgactgacgaggcc
aacaagcgctcttctgtcctggagagagacaaccagaggtctgatgtgcagcttgcagac
atggggcagcagatccgtgtcctactcattgagctggaggaggcgcgtggtaaccatgta
gcccacgacgaggaggtgagctctgctgacatcagcagcacgtcagaggtcatcacacag
cacctggtgacgtttcgtggggtggaggagctccagcagcagaaccagcgcctcctggtg
gccctccgagagctcagcgaggcacaggagagtgaggaggaagagaccactggcaccaag
tgcagtgagctggaacgcagtctggagaaggcccaggcagagctggaggctctgcgagag
cagcggagccaccagatgcagctggctgagtccatcgttaggcagagagatatgtacaga
gtgctgctggcccaggccaccggagtcagcttccctcagcaaggtgcagcagctgctgag
gagttctctagcaccccccgccgctccccagccgccacccccaccacacccactggaatc
attactatggcaaccgagtcaaccgaggtggtagaggccaaggcagccctccgacagttg
caggaagtgttctcgtcctataagagggagaggtctgagagtgacaaggccctgatggag
cagagtgagaagctccagaagcaggtgtctgaccagagattccagaatgccaagatatcc
acccaactggagtttacctccaagaggtatgagatgcttcaggataatattaagggctac
aggaaggagattgcctctctgatggagaagggacagaagatggctgctgtagcccagaag
tgtgagcagactgttcacaccatgacccaggacctgagggttgcccaggagaaactaaac
atggcagagggtcgtgctgagagcctcaggaaggagagagagatgctgaagctagtggag
tccagactgacccaggagaaggagaccatgcagacccaacaacgaggacagaacatgctg
ctcaccaatctcaagaccatagaggccacgttggagcgctccgagacagacaccaggcag
cgtctgaacgcccagatagagaagcaggagagggagatcggccagctgcagaagagactg
gagcacgaggtggagcaacgccacctgctgagcagaaaccaagatttgcagctgatggat
gccaagaggcagctggagacccagacggccctgctcctgaagaccagggatcagctgagt
gctgcccagctggaggtgagctctctcaggctgcagcagggcagtggagagggtggtcgt
ctgtccctgagctccccgtccactcccatgggcatcagaggtttccaggtttcagaaggg
gagtctgaggatctgcatggccgcctgaagcaggcagagacacgggcagaggagctgaca
gagcagctgaggacagccacctccagcatggagctgtacagagccatggcccagagccta
gaggagtccctggacaaggagatgcaggtgacagagcaggctcggtctgccattgaggag
cgtgtgaaggaagcccaggagcagcaccgtcagttggagaaaaagctcctggaggcagag
aatgagaagcagggcctacaggaggagaagatgaaagccctggcctccgtggagcagcag
gtggctgtgctgaggaggagtctgagcagtgtgcaggcggaccaccaggaggctctacag
atggcggcggtggcagcagcccaggaacagcaggccatgctggacagccaggaacaggcc
aagctggcatcagaggcacaagataagtatgagcgtgagatgatgctccacgctgcagac
gtggagtccctccaggcagccaaggcccaggccctgcaggcagccacgctcagacagcag
ctggaggagagggcccagagagcctctgctcagctgctggaggtcagagtctcctgggag
gaacaggagaggatcctcaaggaggagatgtctaaggtggtgtctcgttctgaagagctg
cagaggcagaacatcctcctccatgaacagattcagaccatgagctgcaagatggccgcc
accctgcagcgccaggccaacgagagccctctgaacatctccctcacggaggaaggcaag
tctcaggaccaggtccttgagatactcaggtttgtgcgccgagagaaggagatagcggag
tctcgatttgaggtggcccaaggagagagtcttcgccataggctgagagtagagcacctg
gagagagagctgagagaactacaggatagccttagtgctgagagagagcgaatgcaggtg
acagctaagaccctggctaagcacgatgagctgatgaagaagactgagaccatgagtgtc
ctgatggagaccaacaagatgctgagggaggagaaggagaggatggagcaggagctccag
cagacacaggctaaagtgcgtaagctggagtcggacataatgcccatgcaggagtccaac
gctgaactgagtgagaagagcggcatgctgcaagcagagaagaggattctggaagaggac
ataaaacgctggaaggccagaacacagcacctggtgagccagcagaaggacacagaccca
gaggagtacaagcgtctccactctgagaaggaggctcacctcaaacgcatccagcagctc
actgaggagacgggcagactcaaggctgaggtggccaggagtggcggctcggtgacgtcc
ctccagagccaggtgcagatgctgcgtgagggtttggggaaggtgagctctgacagggat
gatctgaggaggagtatggaggccaagaacctggacatccaggagaagttccgcaccatc
actcaggtcaagaagattggacgccgctacaagacacagtatgaggagctcaaggtggag
catgacaagatggtgtttgaggcagcgtccaccccagcccaggagcacgaggcccagcag
gcctcagcccaggagctccagggtctgaaggactccctgggacaggctgagacccggacc
aaagacctggagggacagctggacaacctcaacaaggtggtgggtgagcgtgaggcggag
gtgcgcgggtcgcaggagcaggcctccaggctgcagacagagctgaccaggctgagacag
gagctgcaggagaaggcctcccaggaggacaccctcagacagcagatggctgagaaggag
gagaagaccaggaaggcctttgtcggggccaagcagagaatcaaccagcttatgggctcc
aaggaccagctgcagaaggaaaatgaggagctgaaacagcagagggaggagctggaggtc
agagtcagtgctctgaagtcccaatacgagggccgtctgagccgccaggagagggagctg
cgggacctgagggaacagcaggagagacacggagagcagagggatgaggctcttgaacag
ggtcccagcaaggctcaggaacagcagaggaccacagagcagcgaggaccactgaagacc
acccaagctgcagaccggggcagcaccagtacctctgagccccctactgccaacatcaag
cctacccctctgggtgctcaaggccccagcaagccccctgctatccctgggaacaagccc
accccccgggcaagcatcaggcccatgatcacacccgccaccgtgcccacccccacacct
actgccaccgtcatgccaaccacacaggtggagaaccaggaagccatgcagtcatccgag
gccccgcctgagcatgtgactgtttacggcagtgccagcggttcagtacggtcaaccagc
cccaacgttcagaccaccaacccaatgctggtggtccagcagacccagacccagaccaca
gccttcgtccagccaacacagcaacagagcctgccccacactgaaccaaccaatcaggag
cagcccccggccccagtaattgaagcggcacccagttcgcaaatggagaggccgtcgacg
tcaacagccgtgtttgggacagtttcagccaccccaggaacatcttccatgtccaagaga
cctcgtgaggaggagcaggacagctctatggtggctgacnccccccaggaggacccctct
gaaccccccatccccaagaagctacgcatcatccagagagtcgacccagaggagccagag
gcccaggacgaggtgctggctgagggcagtgcagagggactggtgcctggagagagccag
gaagccccagagaccagccaggtggtggaggagtacccagtactagaggaggctgaagag
ggtgcagcgtctcagtctgtccctgtagagctgctcctgtccgagaccgctttcatctca
ttttcatacgacgccaacgaagaacccccacaacacgatgtcatcgtcatagtgaccgac
tctgaaagcgaggacgagcagcaggaggaggaggatgaggaagaggaaccggactatgat
gatgaggaggaggatgacgacgaggaggaggaggatgaagatgatggagggatgggggat
gaaggggaggagagcaatgaagggagcagagatggcaatgaggcatatgaaggcgacgac
acagagggtcctgatgggacagacccaggcacggagacggaggagagtctaggagcatct
gactccacccagcgcccggctgactcccagacacacagcttcgagggcagcagcagtatg
gaagccttctcaagtgacccaaccagctctgctcccagaatgcaccagtctccacggaga
gcaccccatccgctgcccccccacctcaacatcacccaggaagggggaccccctgctcag
cgccccatgcgtcgccagtcggtaggcagagtccctcagctcacccctgggatggccagc
ggcggacagcacttttttgacgatgatgacaggatggttcccagtactccgactctggtg
gcgccacaccgctctgacagctttgcagaagctatccattctccccaggtggctggtgta
ccccggttcaggttcggcaccccagaggacctgatgccccagaccaccacctcccactct
gacctgggacatctggcatcacaaggaggtcttgggatgtatgatagtcctttgttcctg
cctggtcatgaggatgagtctgggggcctcagtgttcccaccacacccctgcaggtggct
gccccagtgtccatatttgcagaggtcccgccatctgacggcacggaacacacctctcag
tctgttcccatggtaaccacctcaaccccaggcttggtggtggccgaaggaccaagtcct
ggggacgagagggatgatgtcttcatggcgccggggggagaccttgtggaggtgtctctg
gaacctgtaatatctcgggcgggggagatagaggaacctacccaggtctcagatgactgc
ggcctgccttctaccagccaggaactctcctccagctctgcagacactcgtaggactcag
cccaaaccctctagaccaggacacagccgacagctccaacgctggacagagaaccgcatg
aggagagggacgttgccatcacggggtgtaactgggactgggaggagatttgcccgataa
DBGET
integrated database retrieval system
