Oncorhynchus masou masou (cherry salmon): 135513088
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Entry
135513088 CDS
T10723
Name
(RefSeq) desmoglein-2.1-like isoform X1
KO
K07597
desmoglein 2
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04382
Cornified envelope formation
omm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
135513088
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
135513088
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omm04515
]
135513088
Cell adhesion molecules [BR:
omm04515
]
Cadherins
Major cadherins
135513088
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Fibulin_C
DEC-1_N
Motif
Other DBs
NCBI-GeneID:
135513088
NCBI-ProteinID:
XP_064791854
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All DBs
Position
24:97186401..97208494
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AA seq
1158 aa
AA seq
DB search
MNRGSLPAAAFLLLTFTVLVSVAVVEARHSAGLRRHKREWIIPPQKLDENVDYTKKEFIA
KIRSDSDDGTGNVQYSLTGVGATKYPFNLFIVNPDTGFVRITGILDRETIAMYNLSGTAK
FTDGSEAEKNIDLRIQVVDQNDNPPIFGDIKPGEVYELSPKGTSIMTLTATDADEPGNEN
SKIAYTIIKQEPPGESMFHITDDGVLEVKKNTLDREVQDWYMLTVKGTDLNGRPEGNTGT
GTIRVNIKDVNDNRPTLEKDEYEGSIEENTENVEVMRFKAEDMDMENTPNWVAQFEIVKG
NEAGYFSIETDPKTNEGVLILKKSVDYEDVKHLELGIAVANQAPPYNGEGGGGGGGGGSG
TGGGGGGGGGGGGMTGGGGGTGGGGGMGGGGGSGGGSSGGGIGGGGGGSWVGGGGSTGKP
MKTYPVKIAVKNQPEGPRFDPKVKAIPISEGGDFNINKVIGSYHAIDGDTLMPAQNVRYA
KGSDPDNWLTVDELTGDIKLNKMPDRESKFLVNGTYYAKVLCMTQDMPSKTATGTVAIHV
EDLNDHCPTLTSDVQTMCMTADAITVTAVDKDAFPNGAPFTFTIIPEGTEGVWVVEHLND
TSTILKSQKDLWPGSYAVAMEIRDRQGHACPDLQKLKVDVCTCADKGKACATRGAKGSTG
AVLGPAAIGLLFLGLLTLLLIPLLLLFCTCGGAGGLPGGFTEMPFDAKAQLISYHTEGQG
ENTEVPLLNAPVQVDTGRVKMVNAETIAATAGGAGLMIGGGQFQNSSSTMGGGFYQSDGL
MDIGYNNGGEIIGHGNGGGFYSEYESREGGGAYEGIALPDHYLEEYYSQKAHCAAENHIQ
KDSMLVYDYEGQGSAVGSVGCCSLLESDNDLQFLNDLGPKFKTLAEVCRGERFQTVSAPL
PPRPIISMPTAASSVTTNVASRLVSAAPVPAPAPDPAPAPAPAPPPAPAQVTHVERAVVR
ESDRLSTLRQDMVGGSQGQTFLLQQQPMYYTTMQPMMQPVVQQMHYVVEQQVPNIQGMIM
VNGPPSGSAQGLVLQGQQVVTGNQAQGTLGRGEGGLMHMGNMSGSQGMMVVDGPVMQGGQ
MLQGGQMLQGGQVFQGGQVLQGGQLVQGGQVLQGGQAWLQQSSSLQRGGLSGSQSMLVME
GQGVSAEVVGCRKAREGC
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgaatcggggttctttgcccgccgctgcttttttgctacttacattcacggttttagtg
tctgtggctgtggtggaggcacgtcattccgctgggcttaggagacacaagagggaatgg
atcatacctccccagaaactagatgaaaatgtagactacaccaagaaagagtttatcgcc
aagatccggtcagattcagacgatgggactggtaatgtgcagtactctctaactggggtg
ggagctactaaataccccttcaacctgttcatagtgaaccctgacactggctttgtacgc
atcactggtatcctggaccgggagactatcgccatgtacaatttgtcaggtaccgctaag
ttcactgatggcagtgaagcagaaaagaacattgatttgaggatccaagttgtggatcaa
aatgataaccctcctatttttggtgatattaaaccaggagaggtgtatgagctcagccca
aaaggcacgtccatcatgacattgactgcaacagacgctgacgaaccagggaatgagaac
tctaagattgcctacaccataattaaacaggagcctccaggagagagcatgttccacatc
accgatgatggagtactggaagttaaaaaaaacacactggacagagaggtgcaggactgg
tacatgctgacagtgaaaggtacagatctgaacggtagaccagagggcaacaccggcacc
ggaaccattagagtcaacatcaaggatgtgaacgacaatcgtcccactctggagaaagat
gagtatgagggcagtattgaggagaacacagagaacgtggaggtgatgaggttcaaagcg
gaggacatggatatggagaacactcctaactgggtggctcagtttgaaatcgtcaaggga
aacgaggctggctacttcagcattgagacagaccccaagaccaacgagggagttctgata
ctcaagaagtctgtagactatgaagacgtcaaacaccttgagctgggaatagccgtagct
aaccaggctccaccttataatggtgaaggaggaggaggaggaggaggaggaggaagtggg
acaggaggaggaggaggaggaggaggaggaggaggaggtatgacaggaggaggaggtggg
acgggaggaggaggtgggatgggaggaggaggaggcagtggaggaggcagcagtggagga
ggcattggaggaggaggtggaggatcgtgggttggtggtggaggttctacagggaaacct
atgaagacctacccagtgaagatcgctgtgaagaaccagccagaggggccaaggtttgac
cccaaggtcaaggctatccccatctcagagggaggagacttcaacatcaacaaggtgatc
ggctcataccatgccatcgacggagacacactaatgcctgcacagaacgtcaggtatgct
aagggctctgacccagacaactggctgaccgttgatgagttgactggggatattaaactc
aataagatgcctgacagagagtccaagttcctggtcaacgggacatactatgccaaagtt
ctctgcatgacccaagacatgccctctaagacagccacgggtacggtagccatccatgtg
gaggacttgaacgaccactgccccacgcttactagtgacgttcagaccatgtgtatgaca
gccgatgctattaccgtgactgcagtggacaaggatgcgttccccaacggagcccccttc
accttcaccatcatcccagagggaacagagggagtgtgggtggtcgagcacctaaacgac
acctcgaccatcctgaagtcccaaaaggatttgtggccgggctcctatgcagttgccatg
gagatccgcgaccggcaggggcacgcgtgtcctgacctgcagaagctaaaggtagatgtc
tgcacgtgtgcggacaaagggaaggcgtgcgcgacgcgaggagctaagggctctactggg
gcagttctagggcctgcagcaattggactgctcttcctgggtctgctgacgctactgcta
atccctctcctgctgttgttctgtacgtgtgggggtgccggaggtcttcctgggggcttc
actgagatgccctttgacgccaaggcacaacttatatcctaccacactgagggacagggg
gagaacacggaagtacctctgctgaacgcaccagttcaggtcgacacaggaagggtcaaa
atggtcaatgcggaaaccattgcagcaacggccggaggggcggggctaatgataggtggt
ggtcagttccagaactcctcttccacgatgggtggtggattctaccaatcagacggcctt
atggatattggatataataatggaggagagataatcggccatgggaatggagggggcttt
tattctgagtatgagagcagagaaggaggaggagcctatgaaggcatcgccctgcctgat
cactacctggaggaatactactctcagaaagctcactgtgcagctgaaaaccacatccag
aaggacagtatgttggtgtatgactacgagggccagggctctgctgtgggctcggtggga
tgctgcagcctcctggaatctgacaacgacctccagttcctcaatgacctagggccaaag
ttcaagaccctggccgaggtgtgccgcggagagaggttccaaactgtctctgcgcccctg
ccacccagacccatcatctccatgccaacagcagccagcagtgtgacgaccaatgtggcg
tccagactggtttccgccgccccagtcccagccccagcaccagacccagcaccagcccca
gccccagcaccgccccctgccccggcccaggtgacacacgttgagagggctgtggtgagg
gagtcagatcgtttgtctactctgaggcaggacatggtgggaggaagccagggccagacc
ttcctactgcagcaacagcctatgtactacaccaccatgcagcctatgatgcagcccgtg
gtgcagcagatgcactatgtagtggagcaacaggttcccaacatacagggcatgataatg
gtcaacgggcctccgtcaggctcggcccagggcctagtgctgcaagggcaacaggtggtg
accggtaaccaggctcagggcacgcttggcaggggagagggaggcctgatgcatatgggg
aacatgtctggttctcagggtatgatggtggtggatgggccggtgatgcagggggggcag
atgctccaaggggggcaaatgctgcaaggggggcaggtttttcagggagggcaagttctt
cagggggggcagttggtacaagggggtcaggtccttcaggggggtcaggcctggctgcag
cagagtagctccctgcagcgagggggcttatcagggtcacagagcatgctggtgatggag
ggacagggggtatcagcggaggtagtggggtgcagaaaggccagggaggggtgttag
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