Oncorhynchus masou masou (cherry salmon): 135513089
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Entry
135513089 CDS
T10723
Name
(RefSeq) protein SSXT-like isoform X1
KO
K15623
protein SSXT
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135513089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omm03036
]
135513089
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
135513089
GBAF(ncBAF) complex
135513089
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
135513089
NCBI-ProteinID:
XP_064791859
LinkDB
All DBs
Position
3:24000798..24013858
Genome browser
AA seq
427 aa
AA seq
DB search
MSVAFAPHRQRGKGDITPTGIQKLLDENNQLIQCIMDFQSKGKTAECSQYQQMLHRNLVY
LATIADSNQNMQSLLPAKCDSPTPPEVKLEPPTQNMPMGPGGMNQSGVPGPQPPHGHNMP
SEGMVSGGPPAPHMQSQMNGQMPGPNHMPMQGPGQGPNQPPNMPGSGSMNMPPSSHGSMG
GYNHAVPSSQSMPAQGQMNMTQGPMGNYGPRPNMNMQANQGPMMHQQPPSQQYNIPPGGG
GQHYQGQQNPMGMMGQGNHVMGQRPMPPYRPPQQGPPQQYPGQEDYYGDQYSHAGQGASE
ERDPAANQQSPYEKDNERDPAANQQSPYEKDHGNAQYGQQQEAYQQGPPQQQGYPPQQQY
PGQQGYPGPQQGYGPSQGAPGQYPQGYPQGQGQQYGAYRGPQPGPPQAQQQRPYPGYDQG
QYGNYQQ
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcgtttgcacctcacaggcaacgtggaaagggtgatataacacccactgga
attcagaagttactggatgaaaacaatcagttgattcaatgtataatggacttccagagc
aaaggaaagacagcagaatgttcacagtaccagcagatgctccacagaaatttagtttac
ctggccacaatagcagactccaatcagaacatgcagtctctgctccctgctaagtgtgac
tcccctactcccccagaggtaaagcttgaacctcctactcagaacatgcccatgggccct
ggtgggatgaaccagagcggagtgccgggcccccagcccccccacggacacaacatgccc
tctgagggcatggtcagtggcggacccccagccccacacatgcagagccagatgaacgga
cagatgcctgggcctaatcacatgcccatgcagggccctgggcagggtcccaaccagccc
cccaacatgcccggcagcggctccatgaacatgccccccagcagccatggctctatgggc
ggctacaaccatgctgtgccctcctctcagagcatgcctgcccaaggccagatgaacatg
acccaaggacccatgggtaactacggcccccggcccaacatgaacatgcaggctaaccaa
ggccccatgatgcaccagcagcctccctcccagcagtacaacataccccctggaggtggc
gggcagcactaccagggccagcagaaccccatgggcatgatgggccaggggaaccacgtg
atggggcagaggcccatgcccccttacagacccccacagcaaggaccccctcagcagtac
ccagggcaggaagactactatggggaccagtacagtcacgcaggacagggagcctcagaa
gagcgagacccagcagccaaccaacagtccccctatgaaaaagataatgagcgagaccca
gcagccaaccaacagtccccatatgaaaaagatcatggtaatgcccagtatggccagcag
caggaggcctaccagcaaggtcctccccagcagcagggctaccccccacagcagcagtac
cctggacagcagggctaccctggaccgcaacagggctacggtccgtcccagggagcccca
ggccagtacccccagggttacccccagggtcaggggcagcagtacggggcctaccggggc
ccccagcccggcccccctcaggcccagcagcaacgcccatacccaggctacgatcagggt
caatatggaaattaccagcaatga
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