Oncorhynchus masou masou (cherry salmon): 135513256
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Entry
135513256 CDS
T10723
Symbol
hps3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135513256 (hps3)
Membrane trafficking [BR:
omm04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
135513256 (hps3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
135513256
NCBI-ProteinID:
XP_064792173
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Position
24:109714374..109740811
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AA seq
1076 aa
AA seq
DB search
MVHVYNCHPFASQQIVPTEQEPGLVCCGGGALFVVSAGGCKIEAFQLGEEGCPLICRFAT
MGTVQSILHSEIGDYLVTIEEKNNAPYLRAYTNWRYQAAEKTRVGVRLLGHFLRGSSMRG
APKEQMEIIEIPLFERPLCVACCGVTGDLLVGCPKSLVLFSLKRQALNDKLSILDFERCL
IIHLPGLSPQQVGMDVAICAGYIALQTELEVLVVKLERLPGAAFTQKSADKKPQDHSLVP
QDMITGAEHDNETEGRREGLAGHRDHDDFFIFPKHQELLGDRAKDCGVKISLEWTGMESE
ARGNLIITYILYRRFAPDFFQDCSVEETHLHSLQFHPVFTSNQEVCVEGGRGVEPTCLFC
FFSLPKTGYLYSVRGGVQMVSAYQYPEKAQQAVLTDLFLHIITKNALQCFSVRCAAVAAR
AEDPYIDTTMKACPPITMELCALRIQLFIGLKALCHYRHHVVLLTTADVETREDTERTAR
RVIEYKDHKTLRGIFLAVGIEPSTTPALKHFLANSFLNRKSPFTKPQNPSEMGHGWNLYV
VNTVTPLQLYNEMVEYSKTYEETNPLSHSRLHLLSEAHLLLRATLLDPRVGNPVERPQTT
GQNLAQALRYNTTPTADRRELLQAFQESCAQLGDCFSRFDKRDCHLALPYYKMSGLSLTE
VISRNRGLSNSLCGYGQGFLYFLKHSLYEETLELLTEETANEVLDIFGVAEPSQLPHVIA
SPSMARASPDCGLAHLERLESIGAPSVPLTLSKAALALRMPDLQLYRQHMDRHTEMLQVY
GFIEEAKLLLHGRGDTVVPTLLARHLRDNQDGLLVAAMVALHENDKVKLDEADLFFQELC
GDVSGPQGGPQLLVDFWEALLMASSQEAVIQELLFRLTTVYIDRVTRRDGRGFKPHKSAD
DLINWCSHYGVLYPWVSILTPAHFNIIPEDLHKLQSLLCGPTLDVSSILPLLEQLPDEDN
AGLSVHVLCATKLGHYESSIERLLDRCPQAIIPYANHELQNNNMALWWQKLFPELCERTR
ATQGENTILLAALKETLVVVAMELNPLEFLDLLPDDGTVHFFLPHLLECSQRNLMM
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggttcacgtatacaactgccaccccttcgcgtcccagcaaatcgtgccaaccgagcag
gaaccggggttggtgtgctgtggcgggggtgccctattcgtggtgtccgctggaggatgc
aagatcgaggcttttcaactgggagaagaggggtgtcctctcatctgccgcttcgccact
atggggactgtgcagagcatcctacacagtgagataggggactacctggtgaccatcgag
gagaagaacaacgccccctacctacgcgcctacaccaactggcgctaccaggcggctgag
aagacccgcgttggcgtgcgtctgctcggtcatttcctgcgcggctcgtccatgcgcggg
gctcccaaggagcagatggagatcattgagattccactgtttgagcgtccgctgtgtgtg
gcgtgctgtggggtgaccggagacctgctggtggggtgtcctaagagcctggtgctgttc
agtctaaagagacaggccctcaacgacaaactctccatcctggactttgagcgctgtctc
atcatccacctcccgggactgtcgccccaacaggtagggatggatgtggcgatctgtgca
gggtacattgccctgcagacagagctggaggtgctggtggtcaaactggagagacttcct
ggtgctgcttttacccagaagtcagctgacaagaagccccaggaccacagtctggtcccc
caagatatgatcactggagcagaacacgacaacgagacggaggggaggagagagggtctg
gctggtcaccgtgaccatgatgacttcttcattttccccaagcaccaagagctcctgggg
gacagggctaaggactgtggggtcaagatctctctggagtggacaggcatggagagtgag
gccaggggcaacctcatcatcacctatatcttatacaggcgttttgctccagacttcttc
caggactgtagtgttgaggagacccacctgcactccctgcagtttcacccagtgttcacc
agcaaccaggaagtatgtgtggaggggggtagaggggtggagccgacatgtttgttctgt
ttcttctcgctgcccaagacgggctatttgtacagcgtgaggggcggggttcagatggtc
tcagcctatcagtatccagagaaggcccagcaggccgtcctcactgacctcttcctccac
atcatcacaaagaatgctctccagtgcttctcagtgagatgtgcagcagtggcagccaga
gctgaggacccttacatcgataccaccatgaaggcctgtcctcccatcaccatggagttg
tgtgctctgcgtattcagctgttcattggtctgaaggctctgtgtcactaccgacaccac
gtcgtcctgctgaccactgcagatgtggagaccagggaggacacagagaggaccgcacgc
agagtcatagaatacaaagatcacaaaacccttagggggattttcctagcagtaggtata
gagccttccaccacgccggctctgaagcattttctggccaactccttcctgaacaggaag
tcacccttcaccaagccccagaatcccagtgagatgggtcacggctggaacctgtacgtg
gtcaacaccgtcaccccgctccagctctacaacgagatggtggagtacagtaagacgtat
gaggaaaccaaccctctgtctcacagccgtctgcacctgctcagtgaagcccacctcctc
ttgagagccacgctcctggacccccgggttggaaaccctgtagaacggcctcagaccact
ggtcagaacctcgcccaggccctgagatataatacaacccccaccgcagacagacgggag
ctgctgcaggccttccaggagagctgcgcccagttaggagactgcttcagcaggtttgat
aagcgggactgccacctggccctgccctactacaagatgtcaggcctgtctctgacagag
gtgatctccaggaacaggggtctgtctaacagcctctgtggctacgggcagggcttcctc
tacttcctcaaacactccctctatgaggagaccctggagctgctcactgaggagacggcc
aacgaggtgctggatatcttcggtgtggccgagccgtcccagcttccccatgttatagcc
agcccttccatggccagagccagccctgactgtggcctggcccacctagagcggctggag
tccatcggagccccctccgtacccctcaccctgtccaaggctgccctggccctgcgcatg
ccagacctgcagctctacaggcaacacatggaccgacacacagagatgctgcaggtgtat
gggttcatcgaggaagccaagctgctgctgcacggcagaggggatacggtggtacctact
ctcctggctcgtcacctcagggacaaccaggacggcctgctggtggcagccatggtggcg
ctgcacgagaacgacaaggtcaaactggacgaggctgacctcttcttccaggagctgtgt
ggggatgtgtcagggccccagggaggccctcagctactggttgacttctgggaagccttg
ctgatggcctcgtcacaggaagccgtcatccaggagctgctgttccgcctcaccactgtc
tacatcgatcgcgtcacacgccgagacggccgcggattcaaaccgcacaagagcgcagac
gacctgattaactggtgttcccactacggcgtgttgtatccctgggtcagcatcctgact
ccagctcacttcaacatcattccagaggaccttcacaaactacagtccctgctgtgcggt
cccaccctggacgtgtcatccatcctgcccctgttggagcagctgcctgacgaggacaac
gccgggctcagtgtgcacgtgctctgtgccaccaagctgggtcactacgagagctccatc
gagaggttgctcgaccgctgtcctcaggccatcatcccttatgctaatcatgagctgcag
aacaacaacatggctctgtggtggcagaagctgttccccgagctgtgtgagagaaccaga
gcaacacagggagagaacaccatcctgctggctgcactcaaagaaacgctggtggtggtt
gccatggagctgaaccccctggagttcctggacctgttgcctgacgacgggacggtccac
ttcttcctgcctcacctgctggagtgcagccagagaaacctcatgatgtga
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