Oncorhynchus masou masou (cherry salmon): 135513355
Help
Entry
135513355 CDS
T10723
Name
(RefSeq) LOW QUALITY PROTEIN: probable JmjC domain-containing histone demethylation protein 2C
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omm03036
]
135513355
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
135513355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
Motif
Other DBs
NCBI-GeneID:
135513355
NCBI-ProteinID:
XP_064792355
LinkDB
All DBs
Position
24:1037798..1164342
Genome browser
AA seq
2928 aa
AA seq
DB search
MIQMTFLDDVVHSLLKGENIGIQSRRRSRSNQNNSAHGHYTRAQANSPRPVMNSSGGAVK
QGSGVTTQQGQVQGGSQSQQAPAQHSPCQEQMQHRGPGFSRRKGSDSSVPDDDFKGDDVD
CNERAGRGDFFKSTSSKQVAVNKRRKAEEEEEDEEEKKSGLKRLRSETTVRSDFSESSDS
EMSTKRTRTADSSSSSEQNSEEKLKGKTGQEGHKTQGSKTGKESALTGSLSPWGEELQKA
EFQQSSADREQRSSLRQPQRQGEWSPLQQQQAPPLSSSSQGSAPLRAKGSQTFGAEPSVA
PPSPLRKSHSECDLRNQIPSVLECDLRNQTPSVSECDLRNQTPSVSECDLRNQTPSVSEC
DLRNQTPSVSECDLRNQTPSVSECDLRNQTPSVSECDLRNQTPSVSECDLRNQTPSVSEC
DLRNQTPSVSECALRNQTPSVSECDLRNQTPSVSECDLRNQTPSVSECDLRNQTPSVSEC
ALRNQTPSVSECDLRNQTPSVSECDLRNQTPSVSECDLRNQTPSVSECDLRNQTPSVSEC
DLRNQTPSVSECDLRNQTPSVSECDLRNQTSSVCRKPEVKHDIAGSLGSKMGLVHSVVIR
PMASVSESAAVVEREKQLYSSMLPCIKNASLADEARKSYKLSPSPDVPKPLPSPEAMKPK
PLCSPDIVKSKTQSVLETCSKPKPLTSPEVSKHKGRYPDNTPRSSFKPVLARGTESPGSC
TKSPLIIDKNEHFTVYRDPALVRPNQETNHVSYLHPQLHPLHASSHASCLTPSSTHHHTS
HSHHHLLSGVLSGLPPGPLLGGHPRLDSSGLGHLGLAHHHPVSQPQTHSHTSASYNQLGL
YPIIWQYPNETHSYPPRLNLPGSKWVHPENPVSSETNMRKNTASPWLHHQVPVSSSDSLD
QLSHVPVPIRPASADPHRSDPHPHRSEPHRSDPHRLIKINPHASPPLPPAKTAGDLHRED
LKGFVDPIRTITLAHLKQEQDRSRTPTGKDSHLHQLYLEARNKQQQQRMAQQQQQEAGQR
DRASQYKEENRRILQESIEVAPFTAKIRSSETDREPNPYPIPSLPSLPHPYPRIPSLPSL
PHPYPRIPSLPSLPHPQRLHQEKETEPPAADLYKFKQQSQHSPPPSNYFTTLSNSVVNEP
PRLYPSKELNSYFDKGSREQESAAASSLSLGGGAAFSSKSLSKPPPLIKHQADGEGLLGK
ISEQLNQQVSLSNMQRYRLSTIVSPVSPDLSPSSSQSQTQSQTRTHCQTQSQTQSQTRTH
CQSQSQTQSQTRTHCQSQSQTQSQTRTHCQSQSQTQSQTRTHCQSQSQTQSQTRTHCQTQ
KQSQSQTQSQTRTHCQTQAQLRCMPALHRAPVFHPPIQQTLDRKEAGYGRLSPPTLTPIQ
PVSSAGKVSEQQKPPTLLPELREVSAVCKGGAAMTSSEVCRVGDSQSHDKLGWHSERSPG
RKPGATTASVIVRPSTCIKYDGSPGAKTSSSAKDSLTGRMFPGGRPQTVCLKLAYERDRE
SGGKVILPNTNLEEAVCVQQYNNNFMRVPQSQGTFPVSVSAAANSVCNRSSDVTRADSNM
APYGVLSRRQERTYCGPNTSSASRTESCGPRGRAFHSGPGLEPRAELQQQEGSSSRTSSP
NLHPGPSLASRTQASPNPSQSYYGSFIHLKKHKAALAAAQQSRGPSSSPSGSGPESLIEP
SNSKALHISPPPPLASASAQNHRTTESPGASPSPGPLPNGQPAQMNQSQSQPNYHKLKKA
WLTRHSEEDRNINTMMKTEEADKSVTTTVSPSVSKSVTTTVSPSVSKAVTTTVSPSVSKA
VTTTVSPSVSKSVTTTVSPSVSKSVTTTVSPSVSKAVTTTVSPSVSKVVTTTVSEPLCVQ
GCYHHSPSVSKVVTTTVSPSVSKVVTTTVSPSVSKAVTTTVSPSVSEMEMIKPCTVTLIA
STSSDVEMKIEEVKGQEDKMAAEDRNTRRGSKRVYDHDSASESGEDSDASESSKQEQRAK
RQPKPTYKKKQNDMRRRRGDGEKDEDELKPNGIFRSAREKTKLKLSSNNGIPRSVLKDWR
KVKKLKQTGESFLQDDSCSEIGPNLQKCRECRVVRSKKGEQPAHSPVFCRFYYFRRLSYS
KNGVIRVDGFSTPDQFDEEALSLWAPDVYEENELDPDSSKYILSYIGDQFCQMVTTENTA
ATWIKKDAKMAWKRAVRGVREMCDACEATLFNIHWVCHKCGFVVCLDCYKAKERKTSKDK
ELYAWLKCVKGQQHGHKYLMPTQIIPGTVLTEVVSAMHLFREKYSIRSPCVCTGKHNPLL
SKMPATNGVSQVLQNVLNHSNKISLCNVKTETGQLNPIQGKAETNGGSSPASDPSSDSKL
XPPESQSPLHFLADLTEQKSREDKKENKESPLGKVGKEEKVSSLESLHCKASSLVSNITE
QGSTLRDLLTTTAGKLRLGSTDAGMAFAPVYSTAAQMGKSGRSMPNILDDIIASVVENKI
PAGRGAKLSLKLEATTTTTEDREVKTERIERKKQPGTGTGPNPGTGTGPNPGTGTGPNPG
TGTEELPVPKPQLEKALQLHADIPHCWLYDRRLLWLKDHRHPGNWKLFRECWRQGQPVLV
TGLHKPLNAALWKADSFNLEFADHQGDLLNCKDGLVSNSGINEFWDGFEDLTKRPKSKDG
DTVVYRLKDWPSGEEFMALMPSRYDDLMRNLPLPEYCDPEGNLNLASHLPSFFVRPDLGP
RLCCAYGTSVHLTSTRPQDFGTANLNMEVSDIVSVLVYVGVAKGNGVLSKTGVLKRLEEE
DLDDSVKKRLKDSSETPGALWHIYISKDVEKIKDFLHKVAKEQGXEISAEHDPIREPGRY
LSRKLRQRLWEEHDVQGLTVVQFLGDSVLIPPGXLHQVQNLHSCVQVINDFVSPEHVFHS
FHLTQELRSSREEPNYEDKLQVKNILFHSVKDALTSLRRYSQEEEENS
NT seq
8787 nt
NT seq
+upstream
nt +downstream
nt
atgatccagatgacctttctggacgatgtggtccactctctgctgaaaggagagaacatc
ggtatccagtcccgacgcaggtcccgttccaaccagaacaactctgcccacggtcactac
acccgcgcccaagccaacagccccagaccagtcatgaactcctctggcggggcggtgaag
caggggtcaggggtcaccacccagcagggtcaagttcagggcgggtcccagagccagcag
gccccagcgcagcactccccttgccaggaacagatgcagcaccgcggacctggcttctcc
aggaggaagggatctgacagcagtgtccctgatgatgacttcaagggagacgacgtggac
tgtaacgagagagcggggagaggagacttctttaaaagtacgagcagcaagcaggtggct
gtgaacaagcggaggaaagcggaggaggaggaggaggatgaagaggagaagaaatcaggt
ttgaaaagactgagaagcgagactacagtgaggtctgacttctctgagagcagtgactct
gagatgtctaccaagagaaccaggacggcagactcctcctcttcctcagagcagaactca
gaggagaagctaaaaggaaagaccggccaggaggggcacaagacccagggttctaagact
gggaaggagtctgctctgacaggcagtctctccccctggggtgaggagcttcagaaggcg
gagtttcagcagtcatcagccgacagggagcagaggtcatccctacgacaacctcaacga
cagggggaatggtctccactgcaacagcagcaggcccctcccctgtcctcctcctcccag
ggctctgcccctctgagggccaaggggagtcagacatttggtgctgaaccctctgttgcc
cctccctctccccttcgtaagagccactcggagtgtgaccttaggaaccagattccctca
gtgttagagtgtgaccttaggaaccagactccctcagtgtcagagtgtgaccttaggaac
cagactccctcagtgtcagagtgtgaccttaggaaccagactccctcagtgtcagagtgt
gaccttaggaaccagactccctcagtgtcagagtgtgaccttaggaaccagactccctca
gtgtcagagtgtgaccttaggaaccagactccctcagtgtcagagtgtgaccttaggaac
cagactccctcagtgtcagagtgtgaccttaggaaccagactccctcagtgtcagagtgt
gaccttaggaaccagactccctcagtgtcagagtgtgcccttaggaaccagactccctca
gtgtcagagtgtgaccttaggaaccagactccctcagtgtcagagtgtgaccttaggaac
cagactccctcagtgtcagagtgtgaccttaggaaccagactccctcagtgtcagagtgt
gcccttaggaaccagactccctcagtgtcagagtgtgaccttaggaaccagactccctca
gtgtcagagtgtgaccttaggaaccagactccctcagtgtcagagtgtgaccttaggaac
cagactccctcagtgtcagagtgtgaccttaggaaccagactccctcagtgtcagagtgt
gaccttaggaaccagactccctcagtgtcagagtgtgaccttaggaaccagactccctca
gtgtcagaatgtgaccttaggaaccagacttcctcagtgtgtaggaagccggaggtaaag
catgacatagctggcagcctgggcagtaagatggggttagtccattcagtggtgatcaga
cctatggcatcagtcagtgagtctgctgctgtagtagagagagagaagcagctatattcc
tccatgctgccctgcattaagaacgcctcattggccgacgaggccaggaagtcgtacaag
ctaagcccctcccctgatgtccccaagcccctcccctccccagaggccatgaagccgaag
cccctctgctcccctgacatcgtcaagtctaaaacacagagtgttctggagacttgttct
aaacccaaacccctcacctccccagaggtgtccaagcataaaggccgttacccggacaac
acccctcgctccagctttaagcccgtcctggcccgagggactgagtcgccaggatcttgc
actaagagcccgctaatcattgataagaacgagcatttcaccgtgtaccgggaccctgcg
cttgtccgtcccaaccaggagaccaaccacgtgtcctatctgcacccccagctccacccc
ctccatgcctcctcccacgcctcctgcctcaccccctcttccacccaccaccacacatcc
cactcccaccaccaccttctctccggggtgctctctggcctgcctccaggccccttgctg
gggggtcatccccgactagactcctcagggctggggcacctgggactagctcatcaccac
cctgtctctcagccccagacacacagccacacctcagcctcatacaaccagctggggctg
tatccaatcatctggcagtaccccaatgagacccactcctatccccccagactcaacctg
cccgggtccaagtgggtgcaccctgaaaaccctgtcagctctgagaccaacatgaggaag
aacacggccagcccttggctacaccaccaggtccctgtctcctcctctgacagcctggac
caactgagccacgtcccggtccccatccgaccagccagcgccgaccctcaccggtccgac
ccccatccccaccgttcagaaccacaccgctcggacccccaccggctcatcaagatcaac
ccccacgccagcccccctctgccaccggccaagaccgctggagatcttcaccgggaggat
ttgaagggttttgtggaccccatcagaaccatcactctggcccacctgaagcaggagcag
gaccgcagcagaaccccgaccgggaaggacagtcacctgcaccagctctacctggaggcc
cgtaataaacaacagcagcagaggatggcccagcagcaacaacaggaagcagggcagagg
gaccgggccagtcagtataaggaggagaacagacggatcctccaggagagcattgaggtg
gcccccttcaccgctaagatccgctccagtgagaccgacagggagcctaacccctacccg
atcccctcgctcccctccctgccccacccctacccccggatcccctcgctcccctccctg
ccccacccctacccccggatcccctcgctcccctccctgccccacccccagcgcctccac
caggagaaggaaacggagccccctgctgcagacctgtataagtttaaacagcagtcccag
cacagtccgccccccagtaactacttcactaccctgtccaacagtgtggtcaacgagcca
ccgcgtctctacccctctaaagagctcaactcatactttgacaaggggagcagggagcag
gagtctgcagcagcctctagtctctctctgggaggaggggcagcgttcagctccaagtcc
ctgtccaaaccccctcctctcatcaaacaccaggctgatggggagggtctgctagggaag
atatcagagcagctgaaccagcaggtaagcctatccaacatgcagaggtatcgtctcagt
accatagtcagcccggttagtccagacctctcgccttcctccagtcagagtcagacccag
agccagacccgaacccactgtcagacccagagtcagacccagagccagacccgaacccac
tgtcagagccagagtcagacccagagccagacccgaacccactgtcagagccagagtcag
acccagagccagacccgaacccactgtcagagccagagtcagacccagagccagacccga
acccactgtcagagccagagtcagacccagagccagacccgaacccactgtcagacccag
aaacagagccagagtcagacccagagccagacccgaacccactgtcagacccaagcccaa
ctaaggtgtatgccagcactgcaccgtgcccctgtgttccaccctcctatccagcagaca
ctggacaggaaggaggcgggctacggccgcttgtctccacccaccctgacccccatccag
ccagtcagctcggccggtaaggtgtctgagcagcagaaaccgcccacccttctgcccgag
ctacgggaggtcagcgccgtgtgtaagggcggggcagcgatgacctcatccgaggtgtgc
cgagtcggcgactctcagagccacgacaagctgggatggcattctgagaggagtcccggc
aggaagcctggggccaccacggcgtctgttattgtccgtccctcgacgtgtataaagtac
gacggctcgccaggcgccaagacctcttcctcggccaaggactctctgacggggaggatg
ttcccaggcggcaggcctcagacagtctgtctgaaactggcctatgagagagacagggag
tctggagggaaggtgatcctgccaaacactaacttggaggaggctgtttgcgtgcagcag
tacaataacaactttatgagagtgccccagtctcagggaacctttccagtctctgtctcg
gctgctgccaactctgtgtgcaataggagtagtgatgtgactagggcagactccaacatg
gctccctacggtgtgctgagtagaagacaagagagaacctactgtgggcccaacacctcc
agcgctagcaggacagagagctgtggccctcggggcagggccttccactcagggcctggg
ttagaaccaagggccgagctccagcaacaggaggggagctcctccagaacctcatccccc
aacctgcaccccggccccagcctggccagccgcacccaggcctctcccaaccccagccag
tcctactatgggagctttatccatctgaagaaacacaaggcagcgttggcagcagcccag
cagtccagaggtcctagcagcagccccagtggtagtggtcctgagagcctgattgagcca
tctaacagtaaagctcttcacatctcccctccacctccccttgcctcggcctcagcccag
aaccacagaaccacagaaagcccaggagctagccccagccctggccccctccccaatggc
cagccagcccagatgaaccagagccagtctcaacccaactaccacaagctgaagaaggcc
tggctcaccagacactccgaggaggacagaaacataaacactatgatgaaaacagaggag
gctgataagtctgttaccaccactgtgagcccctctgtgtccaagtctgttaccaccact
gtgagcccctctgtgtccaaggctgttaccaccactgtgagcccctctgtgtccaaggct
gttaccaccactgtgagcccctctgtgtccaagtctgttaccaccactgtgagcccctct
gtgtccaagtctgttaccaccactgtgagcccctctgtgtccaaggctgttaccaccact
gtgagcccctctgtgtcgaaggttgttaccaccactgtgagtgagcccctctgtgtccaa
ggctgttaccaccactccccctctgtgtcgaaggttgttaccaccactgtgagcccctct
gtgtcgaaggttgttaccaccactgtgagcccctctgtgtccaaggctgttaccaccact
gtgagcccctctgtgtctgagatggagatgatcaagccttgcaccgtcactctgattgcc
tctacctccagtgatgtggagatgaagatagaagaggtcaaaggtcaggaggacaagatg
gccgctgaggacaggaatacgcggcgtgggagcaagagggtgtacgaccacgactcggcc
tcagagagcggagaggactctgacgccagcgagagcagcaagcaggagcagagggcgaag
aggcagcccaaacccacatacaagaagaaacagaacgacatgcgcaggaggagaggagac
ggagagaaagatgaggatgagctgaaacccaacgggatctttaggagcgccagggagaag
accaaactgaaactgtccagcaacaatggtatcccccgctctgtgctgaaggactggagg
aaggtgaagaagctgaagcagacgggggagtcgttcctgcaggatgactcgtgctccgag
attggacccaacctgcagaagtgtcgggagtgtcgtgttgttcgcagcaagaagggggag
cagccggctcattcccctgtcttctgccgcttctactacttccgccgcctgtcctacagt
aagaatggagtgatccgtgtggacggcttctccaccccagatcagtttgatgaggaggct
ctgtccctctgggctcctgatgtatacgaggagaatgagttggacccggactcctccaag
tacatcctctcatatataggagaccagttttgtcagatggtcaccactgagaacactgct
gctacatggatcaaaaaagatgccaagatggcctggaagagggcagtgagaggggtccgg
gagatgtgtgacgcgtgtgaagccaccttgtttaatattcactgggtctgccacaaatgt
ggcttcgtggtttgtctggactgttacaaggcaaaggagaggaagacctccaaagacaaa
gagctgtacgcctggctgaagtgtgtcaagggacagcagcatggtcacaagtacttgatg
ccaactcagattatcccaggaactgttctgacagaggtggtgagcgccatgcatctgttc
agggagaagtacagcatcaggtctccctgtgtctgtactgggaaacacaaccctctactc
agcaagatgcctgctaccaacggagtctctcaggttctccagaacgtgttaaaccacagc
aacaagatctctctatgtaacgtgaagacagagactgggcagctgaaccccatccagggt
aaagctgagactaacggaggctccagccctgcctcggacccctcctctgactccaaactg
nnacccccggagtcccagagccctctccacttcctggctgacctgactgaacagaagtca
cgggaagacaagaaagaaaacaaggagtctcctctgggtaaggtgggcaaggaggagaag
gtcagtagcctggagtctctccactgtaaagcgtctagcctggtgtctaacatcacagaa
caaggctctactctaagagacctcctgacgaccaccgctggtaaactccgtctgggctct
actgatgctggcatggccttcgctcctgtatactccaccgcagcacagatggggaagagc
ggccgtagcatgcccaacatcctggatgacatcatcgcgtccgtggtggagaacaaaatc
cctgccggccgaggagccaagctgagtctgaagctggaggccaccaccaccaccacagag
gacagggaggtgaagacagagaggatcgagaggaagaagcagcctgggacagggacaggt
cctaaccctgggacggggacaggtcctaaccctgggacggggacaggtcctaaccctggg
acggggacagaagagcttcctgtacccaagcctcagctagagaaggccctgcagctccat
gctgacatcccccactgctggttgtatgatcgcagactgctctggctgaaagaccatcga
caccctggcaactggaagctgttcagagagtgttggagacagggacagcctgtcctggtg
actgggctccataagcctctgaatgcagctctgtggaaggcagacagcttcaacctggag
tttgctgaccatcagggagacctgctgaactgtaaagatggacttgtctcgaactctgga
atcaacgagttctgggacggcttcgaggacctcaccaagagacccaagtctaaagacgga
gacaccgtggtgtacaggctgaaggactggccatcaggagaggagttcatggccctgatg
ccttccaggtatgatgacctgatgaggaatctgcccctgcctgagtattgtgaccctgaa
gggaacctcaacctggcctctcatctacccagcttcttcgtacgcccagacctcggacca
cgcctctgctgtgcttatggtacgagcgttcatttaacatcgaccaggcctcaggacttt
gggacagctaaccttaacatggaggtctctgacatcgtctctgtcctggtgtacgtagga
gtggccaaggggaacggagtcctgtccaagacgggagtgttgaagagactggaggaggaa
gacttggacgacagcgtgaagaagagattaaaggattccagtgagacgcctggagccttg
tggcacatctacattagcaaagatgtggagaaaattaaagactttctgcacaaggttgct
aaggagcaggggncggagatttcagcagagcacgacccaatcagagagccgggccggtac
ctgagcaggaagttgcgtcagcgtctgtgggaggagcatgatgtgcagggcttgaccgtg
gttcagttcctgggggactcggtcctcatcccgccgggcnngctgcaccaggtgcagaac
cttcacagttgtgtccaggtgataaatgactttgtgtctccagagcatgtattccactcc
ttccacctgacacaggaactgaggtcctccagagaagagcccaactacgaagataaacta
caggtaaagaacatcttgttccactctgtgaaggatgcattgacgtcgctgaggaggtac
agccaggaggaggaagagaactcctga
DBGET
integrated database retrieval system
