Oncorhynchus masou masou (cherry salmon): 135513589
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Entry
135513589 CDS
T10723
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette sub-family A member 2-like
KO
K05642
ATP-binding cassette, subfamily A (ABC1), member 2
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm02010
ABC transporters
omm04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
135513589
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
135513589
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omm02000
]
135513589
Transporters [BR:
omm02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
135513589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
DUF4162
Motif
Other DBs
NCBI-GeneID:
135513589
NCBI-ProteinID:
XP_064792547
LinkDB
All DBs
Position
25:14942268..15091355
Genome browser
AA seq
2438 aa
AA seq
DB search
MGFLHQLHLLLWKNVSLKRRGPWVLAFEIFIPLVLFFILLGLRQKKPAIPVKEAFYSAAP
LTSAGIIPIMQSLCPDGQRDEFGFLQYKNATVTQLLERISDVVLQNHLLTADRPGLGQEL
ESLQQHLERLSTPTGPSPLDNGFNTSQGFTVASMLKNQSVFRQFLVRNLSLPNNTASLLL
STPVNLKEVFNMIFGLYPRAGGGSSHASGGAKETAQTPAEKSLQLEEKLLGAMHRLDGGL
IHEALRDPTKAAHRQGLLKLMSQALGLAEGEAGQRYDPQGLKEMEGVLLTGAMLEMLTCG
EDGTGELSKILLVPEKQQSLLQAYRSTVCGGGERQRTERFGEMSQELRDQIDTQSLVDKL
RLEKVNFSAPLSQSHLGALLKDLADVERLVRDVDLLSGLARLLPKGACAGGHTAPGAPAN
TTTSWARNATTWGPNTTETPGEEGGEEEGGGREKGKENPHSQFSAFVQLWAGLQPILCGN
DRIIEPEALKQGNMSSLGFTSKEQRNLGLLVHLMTTNPKILYSPVGSQVDKVIQKANETF
AFVGNVTHYARVWLNISAQLRTYLEEGKLHHQLSWLQLLTSNLRGHPELLNGTDSDLLRG
LLDGNYTLSNTSTLLEQLDTIDNAACGWTHFMSKVSVDIFKGFPDEDSIVNYTLNQAYHD
NISVFASVIFQTNRDGSLPPHVLYKIRQNSSFTEKTNEIRRAYWRPGPNTGGKFYFLYGF
VWIQDMIERAIINTFVGHDVVEPGNYVQMFPYPCYTRDDFLFVIEHMMPLCMVISWVYSV
AMMIQHIVAEKEHRLKEVMKMMGLNNAVHWVAWFITGFVQLSISVTALTAILKYGRVLLH
SDILIIWLFLSIYAIATIMFCFLVSVIYSKAKLASACGGIIYFLSYVPYMYVAIREEVAH
DKITAFEKCIASLMSTTAFGLGSKYFALYEVSGVGIQWRTINQSPVEGDDFNLGLSMMML
IIDASVYGVLTWYIEAVHPGMYGLPRPWYFPLQKSYWLGSGRVETWEWPWGGAARLSVME
EDQACAMEHRRSEEMRGMEEEPSHLPLVVCIDKLTKVYKTGNKLALNKLSLNLHENQVVS
FLGHNGAGKTTTMSILTGLFPPTSGSATIYGHDIRTDMERIRQNLGMCPQHNVLFDKLSV
EEHLWFYSKLKGMAEEDIRKEMDKMIEDLELNNKRHSLVQTLSGGMKRKLSVAIAFVGGS
RAVILDEPTAGVDPYARRAIWDLILKYKQGRTILLSTHHMDEADLLGDRIAIISHGKLKC
CGSPLFLKSTYGDGYKLTLVKKQSESGDQVTQPPFFLSPCSSSSLSPSSSLSPSSLSPCS
EARVTKFIRQFVGSCLLVSDSNTELSYVLPSEAVKKGCFERLFQALEQSLDLLALTSFGV
MDTTLEEVFLKVSEEDQSLENSDAAEADETSGPEQPVVLEDQGSLKLEGWWLKLRQFHGL
IVKRFHCAKRNTKGLFSQILLPAFFVCVAMTVALSVPSIGDLPPLVLSPSQYHNYTQPRG
NFIPYANEDRPQYSSKLSPDASPQKIANTLRLPCGVGATCVLKTPFNSTLDQLAQTLNPS
ANNSKTLAARYFDSMCLDSFTQGVPLSNFVPPPPXPAPSDDPDPRFEDRLWNFTAATLTT
VRETVTSPPTLPLSIREPVRCICSMQGTGFSCPSGVGGRPPLMKVVTGDILVDITGRNVS
EYLLYTSDRLRLHRYGGLTVGNIQKSVPASFGKNNPLMVRKIAVRRSAQVLYNNKGYHSM
PTYLNVLNNAILRANLPPGKGNPAAYGITLTNHPMNRTSARLSLDYLLQGTDVVIAIFII
VAMSFVPASFVVFLVAEKSTKAKHLQFVSGCDPVIYWLANYVWDMLNYLVPATCCVLILF
VFDLPAYTSPTNFPAVLSLFLLYGWSITPVMYPASFWFEVPSTAYVFLIVINLFIGITAT
VATFLLQLFEHDKDLKLVNSYLKSCFLIFPNYNLGHGLMEMAYNEYINEYYAKIGQFDKI
KSPFEWDIVTRGLVAMTIEGFVGFFITILCQYNFLRKPSRVPVSSQPIEDDDEDVASERR
RVLRGEADNDMLKIDNLTKVYKSRKMGRILAVDRLCLGVRPGECFGLLGVNGAGKTTTFK
MLTGDESTTGGEAFIGGSSILKELLRVQQSIGYCPQFDALFEDLTAREHLELYTRLRGIP
WKDEERVVSWALEKLELSKYADMPAGTYSGGNKRKLSTAIALIGYPSLVFLDEPTTGMDP
KARRFLWNLILDILKTGRSVVLTSHSMEECEALCTRLGIMVNGRFKCLGSIQHLKNRFGD
GYMITVRTKTSSSVKEVVRFFNRNFPEAVLKESHHTKVQFQLKSERISLAQVFSKMEQVV
EVLGIDDYSVSQTTLDNVFVNFAKKQSDNLEQQESSPPGGGQSPLQRLLTLLRPRLANTE
LDALVSEEPEELESDDDEGLISFEEERVQLSFNTDTLC
NT seq
7317 nt
NT seq
+upstream
nt +downstream
nt
atgggattcctccaccagctacatcttctgttgtggaagaatgtgtctttgaagagaaga
ggaccgtgggtgttggcctttgagatcttcatcccgctggtccttttcttcatcctgctg
ggcctgcgccagaagaaacctgccatccctgtcaaggaagccttctacagcgcagcaccc
ctcacctcagcaggcatcatccccatcatgcagtctctgtgtcccgacggccagagggac
gagtttggcttcctgcagtacaagaacgccactgtgacccagttgttggagcggatcagt
gatgtggtgttacagaaccacctgctcacagcagacaggccaggactgggccaggagctg
gagtccctgcaacaacacctggagagactcagcacgcccacagggccctccccgctggac
aacggcttcaacaccagccaagggttcaccgtggccagtatgttgaagaaccagtctgtg
ttccgtcagtttctggtcaggaatctgtctctccccaataacacggccagccttctgctc
tccactcctgtcaacctcaaagaggtcttcaacatgatatttggcctgtaccccagagct
ggaggggggagtagtcatgcttcaggtggggcaaaagagaccgcacaaacccctgcagag
aagagccttcaactggaagagaagcttctgggagccatgcatcgtctggacggaggactg
atccacgaagctttacgagacccaaccaaagcagcccatcggcagggcctactcaaactc
atgtctcaggcattaggcctagcagaaggagaggcaggccagagatacgatccccagggc
ctgaaggagatggagggtgttctcctgactggtgccatgttggaaatgcttacttgtggg
gaggatgggactggtgagctgagcaagatcctattggttcctgagaagcagcagtccctg
ctccaggcctatcgcagcacagtgtgtggtggcggggagagacagaggactgagcgcttt
ggagagatgagccaggagctgagagaccagatagacacacagagcctcgttgacaagctg
cgtctggagaaggtcaacttctcggctcctctgtcccagtcccacctgggtgctctgctg
aaagacctggctgacgtggagaggctcgtcagggacgtagacctgctgtcaggcctggct
cgcctgctccctaagggggcctgtgctgggggtcatacggcccctggggcccccgccaac
accaccacctcctgggcccgcaacgccactacctgggggcccaacaccactgagacccct
ggggaggagggaggagaggaggagggtggaggacgagagaaagggaaagagaatcctcat
tcacagttttctgcttttgttcagctgtgggcagggctgcagcctattctgtgtgggaac
gataggatcattgagcctgaagctttgaagcaggggaatatgagctctctgggtttcacc
agtaaagagcagcgcaatctgggtttactcgtgcatctgatgactacaaatcccaagatc
ctctactctcccgttggctcacaggtggacaaagtcattcagaaggcaaatgagacattt
gcgtttgtggggaacgtgactcactacgccagggtgtggctcaacatctctgcccagctc
aggacatacctggaggagggcaagctgcaccaccaactgtcctggctgcagctgttgacc
tctaacctgcgtggtcacccggagctgctgaacgggacggacagtgacctgttgcgtggg
ctgctggatggcaactacaccctgtccaacacctccaccctgctggagcagctggacacc
atcgacaacgcagcctgcggctggacacacttcatgtccaaggtcagtgtggatatcttc
aagggtttccctgatgaagacagcatcgtcaactataccctgaaccaagcctaccacgat
aacatctcagtgtttgccagtgtgatattccagaccaacagagatggctcccttcctcct
catgtcctctataagatcagacagaactccagcttcacagagaaaacaaacgagatccgc
cgggcctactggcgcccggggcccaacacagggggaaagttctactttctctatggcttt
gtgtggatccaggatatgatagagagagccatcattaacacgtttgtgggccatgacgtg
gtggagcctgggaactatgttcagatgttcccctacccctgctacaccagagacgacttc
ctgtttgtgatcgagcacatgatgcctctgtgcatggtgatctcctgggtgtactctgta
gccatgatgatccaacacattgtggctgagaaggagcaccggctcaaagaggtgatgaag
atgatgggcctgaacaatgcggtccactgggtggcctggttcatcaccggcttcgtccag
ctgtccatctcagtgaccgccctgacggccatcttgaagtatggcagagtgctcctccac
agtgacatcctcatcatctggctcttcctctccatctacgccatcgcaacgatcatgttc
tgtttcctggtgtcagtgatctactctaaggccaagctggcgtctgcctgtggcgggata
atctacttcctaagctacgtcccctacatgtacgtggccatcagggaggaggtggcccat
gacaagatcaccgcctttgaaaagtgcattgcttctctgatgtcgaccacagcgtttggc
ctgggctctaagtactttgccctgtatgaggtgtcaggagttggtatccagtggcgcacc
atcaaccagtcgcctgtagagggcgatgactttaaccttggtctgtccatgatgatgctc
atcatcgatgccagtgtgtatggagtactcacctggtacatagaagctgtgcatccaggg
atgtatgggctgccacggccgtggtacttccccctgcagaagtcctattggctgggcagt
gggcgtgtggagacgtgggagtggccttggggaggagcagccaggctgagtgtcatggaa
gaggaccaggcgtgtgccatggaacaccggcgatctgaggagatgcgtggtatggaagag
gagcccagccacctgcccctggtggtgtgtatagacaagctgaccaaggtgtacaagacg
ggcaataaactggctctcaacaagctgagcctcaaccttcatgagaaccaggtggtctcc
ttcctgggccacaacggagccggcaagacaaccaccatgtctattctgacaggtctgttc
ccgcccacctctggctcagccaccatctacggccatgacatccgtactgacatggagcgt
atcaggcagaacctgggcatgtgtccccagcacaacgtgctctttgacaagctcagtgtg
gaggagcacctgtggttctactccaaactcaaaggcatggccgaggaggacatccgcaag
gagatggacaagatgatcgaggatctggagctgaataataaacggcacagcctggtccag
actctgtctggaggaatgaaacggaaactgtccgtagccatagcgtttgtgggcggctcc
cgggcagtcatcctggatgagcccacggcgggtgttgacccttacgcacgcagagccatc
tgggacctcatcctcaagtacaaacagggccgcaccatcctgctgtccacccaccacatg
gatgaggctgacctgttaggagaccgcatagccatcatctcccatgggaaactcaagtgc
tgcggctccccactctttctcaagagcacctacggagacggctacaaactcaccctggtc
aagaaacagagtgagagcggcgaccaggtcacacagcctccattcttcctgtctccctgc
tcctcctcctccctgtctccctcctcctccctgtccccctcctccctgtctccctgctcg
gaggcccgggtcaccaagttcatccgtcagttcgtggggtcctgtctgctggtgtctgac
tccaacactgagctatcctatgtgctgccttcggaggctgtcaagaagggctgcttcgag
aggctctttcaggcgttagagcagagtctggacctcctggctctgaccagctttggggtg
atggacaccactctggaggaggtcttcctcaaggtgtcagaggaggaccagtccctggag
aacagtgatgctgcggaagcggatgagacctctggccctgagcagcctgtggtcctggag
gaccagggcagcttgaagctggagggttggtggctgaagctacgtcaattccatggcctc
atcgtgaagaggttccactgtgccaagaggaacaccaagggtcttttctctcagatcctg
ctgcctgcattctttgtctgtgtggccatgaccgtagccctgtcggtgccatccatcgga
gatctgccaccattggtcttgtctccatcccagtaccacaactacacccagcctcgtggc
aacttcatcccctacgccaacgaagaccgcccacagtacagcagtaaactgtccccagac
gccagccctcagaagatcgccaacacgctccgtctgccttgtggcgtgggcgccacctgc
gtcctcaaaacgcccttcaacagcaccctggaccagctggcacagacgctcaaccccagt
gccaacaactccaaaaccctagctgcccgctactttgactccatgtgtctggattccttc
acccagggagtgcccctgtccaacttcgtaccccctccccctncgccagccccctcagat
gaccccgaccctcgttttgaggatagactgtggaacttcactgctgccactcttaccact
gtacgggaaacagtgacctctccccccaccttgcctctgtctatccgggagccggttcgt
tgtatctgctctatgcaggggacgggcttctcctgccccagtggggtcggggggcggccg
ccccttatgaaggtggtcactggggacattctggtggacatcaccgggcgcaacgtgtca
gagtacctcctctacacctctgacagactgcgcctgcacagatatggaggactcactgta
ggcaacatacagaaatcagtcccagcatcctttgggaaaaataatccgctcatggttcgc
aaaatagccgtgcgcagatcagctcaggtgctgtacaataataaagggtaccacagcatg
ccaacctatctcaatgtcctcaacaatgccatcctgcgcgccaacctgcctccaggcaag
ggcaaccctgctgcatacggaatcaccctgaccaaccaccctatgaaccgtaccagtgca
aggctctctttggactacctgctccagggcactgatgtggtgatagccatcttcatcatc
gtggccatgtcctttgtaccagccagctttgtggtcttcctagtggcagaaaagtctacc
aaggcgaagcacctgcagtttgtctctggatgtgacccagtcatctactggctggccaac
tacgtatgggacatgctgaactacctggtgccagccacgtgctgtgtccttatcctgttt
gtctttgaccttcctgcgtacacatccccaaccaacttccccgcggtcctctctctcttc
ctcctctacgggtggtctataactcctgtcatgtaccctgcctccttctggttcgaggtg
cccagcacggcctatgtgttcctcatagtcatcaacctcttcataggaatcactgccact
gtagccaccttcctgctgcagctctttgaacatgacaaggatctgaaactggtgaacagc
tacctaaagtcctgtttccttatcttcccaaattacaacctgggtcacggcctgatggaa
atggcctacaacgaatacatcaatgagtactatgctaaaataggtcagtttgacaagatc
aagtctccatttgagtgggatattgtgactcgagggctggttgccatgacaatcgagggc
tttgtaggcttcttcataaccatcctgtgccagtacaacttcctcaggaaaccctcgaga
gttccagtcagcagccagcccatagaggacgatgatgaggatgtggcctctgagagaagg
agagtactgagaggagaagctgacaatgacatgctgaagattgacaacctcaccaaggtg
tacaaatcgaggaagatggggcgtatcttggctgtggaccggctatgtttgggcgtgcgt
cctggggagtgtttcggcctcctgggtgtgaacggagcagggaagaccaccaccttcaag
atgctgactggagacgagagcaccacgggaggagaggccttcataggggggagcagtatc
ctgaaggagctgttgagggtgcagcagagcattggctactgtcctcagtttgacgccctg
tttgaagacctgacagccagagagcacctggagctgtacacacgcctccggggcatcccc
tggaaggacgaggaacgggtggtctcatgggccctggagaaactggagctgtccaagtat
gcagacatgcccgctggcacctacagtgggggaaacaagcgcaagctgtccactgccatc
gccctcatcggatacccctctctcgtattcctggatgaacccactacagggatggatccc
aaggcccgcagattcctctggaacctcatcctcgacatcctcaagacgggacgctctgtg
gtgctgacatcacacagtatggaggagtgtgaggctctgtgcaccagactgggcatcatg
gtcaacggcaggttcaaatgcctgggtagcatccagcacctcaagaacaggtttggtgat
ggttatatgatcacagtccggaccaagaccagttccagtgtgaaggaggtggtgagattc
ttcaacaggaatttccctgaggctgtactaaaggagagccaccacactaaggtccagttc
cagttgaagtcagagaggatctccctggcccaggtgttcagtaagatggagcaggtggtg
gaggtgctgggaatagacgactactctgtcagccagaccacactggacaatgtatttgtg
aactttgcaaagaagcagagcgacaacctggagcagcaggagagttcgccccctggtgga
ggccagtcgccactgcagcgcctgctaaccctgctcagaccccggctggccaacacggaa
ctcgacgccctggtcagcgaagaaccggaggaactagagagtgatgacgatgagggcctc
atcagcttcgaggaggagagggtgcagctctcctttaacacagatacactctgttga
DBGET
integrated database retrieval system
