Oncorhynchus masou masou (cherry salmon): 135513640
Help
Entry
135513640 CDS
T10723
Name
(RefSeq) protein shortage in chiasmata 1 ortholog
KO
K28108
shortage in chiasmata 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Meiosis-specific proteins
Others
135513640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135513640
NCBI-ProteinID:
XP_064792576
LinkDB
All DBs
Position
25:complement(38563150..38583675)
Genome browser
AA seq
1464 aa
AA seq
DB search
MSEDGCSFSSHIFSAVKYRALDYSSEASTSLKLTMNWLALPMPYHLGSSDLYPHTGNPPE
VTYRKPWSRGNVISNCKLFVSGSVLDDLGIKGQPTYSLEKLSVSLTQMRVDLLEVIPSSN
PNSQLDLDRDEAAWFLREARKDKGHFVCNESFSKSTGEKMSPRHQCDDLVMPEEVLFADH
LPQFRKHLPSMKAKLSRLRNLPVSDPLLSSTGGTLSEEAIFRHSTPPDALESVDISQFEV
PSLPVNESHCEINEMLLDLKSSDHLVLPTQMEMDLPLTPSPKPNLTQLCLASSQLSAEQI
SPLYRNYFVSEKDQEEMEEALWRAEKHLDLVVGFLLAGKSILQPLTEVLLGIGRDNSVRL
DEGMELSLLGTNSPELIGMYGNGSSDFTESMMISDQPHLMETLSSMIEDFTLLSPCQMDN
ILRESVDDSELSGPPSEIKGRSILKNATPMVVSYHQEREGAGNTDVSAPAVATSQERERT
GNVALTAQASTSSQEKERSGTVVFSTQAVSTSREKERPGSVAISAAQATTTTYLEKLNHA
VRPQKKEGLPHQRANISKLPTPRPSVRDRHMSLPVAKPQKDLDPLSTFMMLRAQQRTYVS
VSPQNHTSTPVAQVEQQTPQPPTTEMRPGFDVKPVAYAVTGNYIRDPEEVIQPVPEDRHN
SKVIHVQATESQFWAYRELQAFALPCLSRARELGLTNTACGDYSTLYPDHTRFLLKQQEK
ELSIRQGQDPEALFNYVALIHVLVTVKDLLFKCDLSTAVEYLSKATEACVGQSLDKLVRK
LEIVLYLSQKKQEPNPKILELQEQLSTWVQSKSKGVQNSNVLVIITMDLDCAIAMLIKAL
SQVTGETVAAVYPEESRSKLEGSKVLDSLQHSCCVVVCSQHMGADFPWDCFSLVVEYSNT
EHSPWAAICTERNITHITFQTRIPNSSVSDPESWSLEQSVPFVLFVTEGLLSCPLLLQIL
ESTCNMTVLERSHSQSLQMLGGTHHYAVITVDESTAVIIQEQEELCQERACESLVIRLTA
LSLQYSCCWLILHCQQDSGLTSEGFNNLVLVYSSLVLFGLKTEDLDVKVLIVSEVVDIAK
WICQIAFHTLLSSDRDPLSYLDREWLSVISSKEERCLLSFPCVNPLVAQLMLSRGPSLHW
LLGASLSQLQELLPEVPYKVVKLFSDTTSLYKLTAATSSTESHTDFTHQKDHNSPTEPWA
TSRDNQYTHTDTHTSRDPHADCNRHTHRDPEPFNSICFLAGSPSAESVAGSFYEESSVMT
KEDGADFQVDLNPSFGSQQAPFQHTWSHNPWEVEKSNELKFVGWNRGGEEWTGSAPLHQE
SCGSPRNYAPENQFLTGLSSSFSYSTNTQRPAYSDNQMYSFSTVGYSDRLHYPDVSHYPS
LASPRGALAWGGSSSGSPNSTALGRGDMSVSPDYGTSYRTGMERKRRAEGPEMAGTVLTP
LKRGKLSYEKVPGRSDGQTRLRFF
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagatgggtgctctttctcaagtcatattttctcagcagtcaagtatagagct
ctcgactattcttccgaggcttctactagtctcaaattaaccatgaactggctggccctg
ccaatgccttaccatctgggtagcagtgacctctacccccacactggtaacccccctgag
gtcacctacaggaaaccatggagcagagggaatgtgatttccaactgcaaactgtttgtc
agtggatctgtactagatgacttgggcattaaaggacaaccaacatattctcttgagaag
ttgagtgttagtctgacccagatgagagtggatcttctggaggtgataccgagctccaac
cctaactcgcagcttgacttagatagagatgaagcagcgtggttcctgcgagaggctagg
aaggacaaggggcactttgtctgtaatgaatcctttagcaagagcacaggagagaaaatg
agcccaagacatcagtgtgatgatcttgtcatgccagaggaagttctgtttgctgatcac
ttgccacagttcaggaaacatctgccctccatgaaagccaagttgtccagactgaggaat
ctgcctgtgtcagatcctcttctcagctccactggaggcaccctgtcagaggaagctata
ttcaggcactcaactcccccagatgcactggagtcagtagacatatcccagtttgaagtg
ccaagcctgccagtcaatgaatcccactgtgagattaatgaaatgctgctggatctcaag
tcatcagatcacttggtgttgcctactcagatggagatggacctacccctcaccccctct
cccaagcccaacctgacccagctctgtctggcctcctcccaactctcagctgagcagatc
tctccactctatagaaattattttgtgtctgagaaagatcaggaggagatggaagaggca
ctttggagggcggagaagcaccttgacttggtagtgggctttcttttggcaggtaagagc
atactccagcctttgaccgaagtcttattagggattggtcgggacaactctgtgagactc
gatgaaggaatggaactatcacttctgggaacaaactcaccagaacttatagggatgtat
gggaatggttcctctgacttcactgagagtatgatgatctcagaccaaccccaccttatg
gagacattgagcagtatgatagaggacttcacactactatcaccctgccagatggacaat
atattgagggaatctgtagatgactctgagttgtcaggcccaccaagtgagatcaaaggc
aggtctatcctgaagaatgcaacgcccatggttgtgtcgtatcatcaggagagagaggga
gctgggaacacagacgtttcagcaccagctgttgccacttcccaggagagagagaggacc
gggaatgtggctctcacagcccaagcatctacttcttcccaagagaaagagagatctggg
actgtggtcttttcaacgcaggctgtttcaacttctcgtgagaaagagagacctgggagt
gtggccatctcagcagcacaggctaccaccactacttatctggagaagttaaaccatgcc
gttagacctcagaagaaggagggtttacctcaccagagagctaatatatccaaactccca
acccccagacccagtgtgagagaccgtcacatgagtctcccagtggctaaacctcagaag
gacttagaccctctgtccactttcatgatgttaagggcccaacagagaacctacgtctcg
gtgtcgcctcagaaccatacaagcaccccagtggcacaggtggagcagcagacaccacag
ccacctacgacagaaatgaggcctggctttgatgtaaagcctgttgcctatgcagtcaca
ggaaattacatcagagaccctgaggaagtcattcagcctgtccctgaggacagacataac
agcaaagtcatacatgtccaagccacagagagtcagttctgggcatacagagagctgcag
gcgtttgctctgccctgcctgtccagagccagggagttgggacttaccaacacagcctgt
ggagactacagcaccctgtacccggaccacacacgtttcctactgaaacagcaggagaag
gagctcagcattcgacagggccaggacccagaggctttgtttaactatgtggcactgata
catgtccttgtgacagtgaaggacctgctcttcaagtgtgaccttagcactgcagtggag
tacctatccaaggccacagaggcctgcgtggggcagagtctggacaagctggtgagaaag
ctggagattgttctgtatctcagtcagaaaaaacaagagcccaaccctaagatactggaa
ctgcaggaacagctgtccacatgggtgcagagcaagagcaaaggggtccaaaactccaat
gttctggtgataataacaatggacttggactgtgccatagctatgctcattaaagccctg
agccaagtcacaggtgagactgtagctgcagtatatcctgaggagagtcgaagtaagctg
gagggttcgaaagttctagatagcctgcagcatagctgttgtgtggtggtgtgtagtcag
cacatgggagcagacttcccctgggactgtttctccctggtggtggagtacagcaacaca
gaacactcgccctgggctgccatctgcacagagaggaacatcacacacatcaccttccag
accaggatacctaattcctctgtgagtgaccctgagtcttggtctctggagcagagtgtc
cccttcgtgttgtttgtgaccgagggtctgctcagctgtcctctgttgcttcagatactg
gaatcaacgtgtaatatgactgtattggagaggagccattctcagtccttgcagatgctt
ggagggactcaccactatgctgtgattacagtagacgaaagcactgcagtcatcattcaa
gagcaggaggagctgtgtcaggagcgggcctgtgagagtctagtgattcgactgactgct
ctgtctctgcagtacagctgctgctggctcatccttcactgccagcaggactctgggttg
accagtgagggcttcaacaacctggtgttggtctactcctctctggtgctgtttggcctc
aagactgaggacctggatgtcaaggtgcttattgtatcagaagtggtggacattgccaaa
tggatctgccagatagccttccatacactgctgtccagtgacagagatcctctcagctac
ctggacagagagtggctttctgtgatttcctcaaaggaggagaggtgcctcttaagtttc
ccctgtgtgaaccctttggtggcccagctgatgttgagtaggggcccctctctccactgg
ctcctgggggcctccctctcccagctgcaggagctgctccctgaggtcccttacaaagtt
gtcaagctcttcagtgacaccacgtctctgtacaagctgactgcggctacctcctccaca
gagtctcacactgacttcactcatcagaaagaccacaatagccccactgagccttgggcc
acaagcagagacaatcaatacacacacaccgacactcatacaagccgcgatccacacgcc
gactgcaaccgtcacacacaccgcgacccagaaccattcaactccatctgcttcctcgct
ggctcccccagtgctgagagtgtagcggggagcttctatgaagaaagctctgtcatgacc
aaggaagatggtgcagacttccaggtggacttgaatccctcctttggctcccagcaggcc
ccttttcagcacacctggagccacaacccatgggaggtagagaagagcaatgagctgaag
tttgtaggctggaatagaggaggagaggagtggacgggcagcgcacccctgcaccaggag
tcctgtggctcccccagaaactacgcgccagaaaatcaatttctgacgggcctctcatcc
tcattcagctacagcaccaacacacagagaccagcgtactccgacaaccagatgtactcg
ttctctacagtagggtacagtgaccggctgcactaccctgatgtcagccactaccccagc
ctggcctcgcctagaggagctctggcatgggggggcagtagcagtggcagtcccaacagc
actgccctggggaggggagacatgagtgtgtcacctgactatgggaccagttacagaacg
gggatggagaggaagaggagagcagaaggcccagagatggctggcacagttttaacgcca
ttgaagaggggaaagctcagttatgagaaggtgccaggccgaagtgatggacagacaaga
ctaaggtttttctaa
DBGET
integrated database retrieval system
