Oncorhynchus masou masou (cherry salmon): 135513738
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Entry
135513738 CDS
T10723
Name
(RefSeq) LOW QUALITY PROTEIN: AP-4 complex accessory subunit RUSC2-like
KO
K23291
iporin
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135513738
Membrane trafficking [BR:
omm04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
135513738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RUN
SH3_9
SH3_2
SH3_1
RNA_polI_A34
Motif
Other DBs
NCBI-GeneID:
135513738
NCBI-ProteinID:
XP_064792701
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All DBs
Position
25:complement(8736876..8798113)
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AA seq
1787 aa
AA seq
DB search
MDNPPKLSGETLIVHHIPLVHCQVTGGRQGCGGGGGSLKRSNPFSYPETLGLSRTTSLPE
QDVLQREALVYSSLIQTSTGGGGEGEGGGGGRGGSTGSDDSSVTSSNCEDQVMVMVAHTM
PRVKPREQVNNPLRPRHNPFLLNTEEDDDDEEEEEEEDDGDNLNGYLEDSSFHLHGDTNS
ALDEEGDGIAPFHLHDLGSTTHKPFLLHSTLGKHSWGCSGRLDSLRGVSSDLSTHLEGLD
LLGLDSPRRHGSSGSTLSMDCGEQEWGEDEEEEEDHPMRGGGRGYSQADSSSGSGATHQR
CSCCGLSQTYLEHFPEPFSESSERQLGYASDSSCNSSDGVLVNFSAIYNNMNNSIPATST
KPPPLATTTTNLNSSTDQSCTSSVCICSVLDEEAGSRRGSGGGGXFYLDLHTSPTEPPHL
HSQQPPCPSSNTLPLLIEPHSHPHPTTSSCTCSAEHQRALDLDSNCNSYHPPHSDSGSDL
MSCLRSQARLVVTTQNYYKLVTCDLSSPSPPSPAGSSASVASCSDEHSKDSPAPDTPTAT
QPTEYYLFRRPPGGEEEEEEEEEEEEEEEGGESSQRDEDEEENDEDEQDGKKRKLQEQMG
GACSDPIIEGQVYVNISPPVVGRGPIGGGPSRPRSRSYDRNLDMAPPPRLGSLERMLSCP
VRLSEGTAPLGPSPLPRVTSFAEIAKSKRKNGGSMGSPSLRMGGSSDPFSSTHSAHSHSS
ADFSPILEGLGQGPSHSLPFQRCYSQGSVDRHSPGGGVRETRSKAEGGLSSSSSSSAVVR
YTKDQRPTTLPIQPFTFHHQFSKPPQPLLPLLTGYVSGMQARGGGPSGGPEGGEGANDPG
QDSMRWSQGSGGDGMVSAVASLGPGSVRPSPLGSYSPVRLQGATSSSGTCSTCTPSPQPT
RSLSCPLSTGLLPLHHTPSPAAPAAAAHLPPTPPPPTLGVKRGAVPPMLPPVQGQVQGHH
HHRGTLPTLPAVPQNSETSLGYEETTLDSLEGSRGPGPRTQHGHHLSPQTLKWREYRRKN
PLGVERCSLGGSAGSGDPPLSGSLDGNGRRGGAVGQRITRRNVFDFPPASSGHNPLGRLN
GQSVKQQYYSDFLPDYFSLTERPPEEFCLSPDASSSSSSSSSSQSHIAVDLQQKRGLVKA
INTAVDLIVAHFGTSRDPDVKAKLGNSWVSPNVGHLILKYLCPALREVLGDGLKAYVLDL
IIGQRRNQPWSLVEASTQLGPSTRVLHSLFSKVSQYSEFTSHSMRLNAFIFGLLNLRSLD
FWFNHLYTHEDIVATHYHPWGFLPLSQRPCQPLFEEFLLLLQPLSLLPFDLDLLFEPRLV
QKGQEHRRRKEQLCSASTGEDLDQSARSTFQLMRGWSTESRRAESMRDKREGGGVGKRER
LGLRREGTWPRMEGVGERGNREGMMQRTGSRREGAGMDRSGAGLLEAQPMTTEVGTGFAN
LWRESGRGRGIVKRAKGVGGESQREGESEGGKEERRKERERDWAEEGRQRQERDRQACWW
YQLMQSSQVYIDQSAQGGSKFVKTEKRKKSAERRSQLPPPREGVVEGAESSQDEEGLRER
GRSRKSSSSSSGEWTGSRGRGRLSWMGSPPESLLTQDKENETELGAPVTGAPEASVAQPA
TQAECPSQGMRWGRLFGSSIGGGGTPSRPEQRSAKSQSRLPSGWLTGLDMSVLDLVAQTV
GVGTGKRVEPSAPMAPPTLNQPSLPLQTAQESHTQQPCEVRALCHHIATEPDQLSFQKGD
ILRVLSRADSDWLLCSLGAQRGLVPFIYVTLRGMEDSQVPQWPQGPH
NT seq
5364 nt
NT seq
+upstream
nt +downstream
nt
atggacaacccccccaagctgtctggcgagaccctgattgttcaccacatccccctggta
cactgtcaggtgactggtgggcggcagggctgtggtggaggaggggggtccctgaagaga
tcaaaccctttcagctacccagaaaccctgggcttgagtcgcaccacctcccttcctgag
caggatgtactccagagggaagccctggtatacagcagcctcatccagacctccacagga
ggaggaggagagggagagggaggaggaggagggagaggaggcagcacggggagcgatgat
tcgtcggtgacatccagtaactgcgaggaccaggtgatggtgatggtggcccacactatg
cccagggtgaagccaagagaacaggtcaacaacccactccggccccgtcacaaccctttt
ctgctcaacacggaggaggatgatgatgatgaggaggaggaagaagaggaagatgatggt
gataacctgaacggttacttggaagactcctcctttcatctccatggcgatacaaactcc
gccctggacgaggagggagacgggattgcaccctttcacctccacgacctggggtccacc
acacacaagcccttcctgttgcacagcaccctgggtaaacactcttggggctgctcaggg
aggctggactcccttaggggcgtgtcctctgatctctccacccacctggagggcctggac
ctgctgggattggacagtccacgtcgccacggcagcagtggctccaccctctccatggac
tgcggtgagcaggagtggggtgaggatgaggaggaggaagaggatcatccaatgaggggt
gggggacggggctatagccaagctgactcctcctctggctctggcgccacccaccagcgc
tgctcctgctgcggcctctcccagacatatcttgaacatttcccggaaccgttttcagag
tcgtcggaacgccagctgggctacgccagcgactcttcctgtaacagctcagatggcgtg
ctggttaacttcagcgccatctataataacatgaacaacagcatcccagcaacctctacc
aagccgccacctctggccaccacgaccaccaacctcaacagctccaccgaccaatcttgc
acttcctctgtctgcatctgctcagtgctagatgaggaggcagggagtcgaagaggctcc
ggaggtggggggnctttctacctagacctccacacctcccccaccgaacccccccacctc
cactctcaacaacccccctgcccctccagcaacaccctgccgttactcatcgaaccccac
tctcaccctcaccccaccacctcctcctgcacctgctcagctgaacaccagagggctcta
gacctggactccaactgtaactcctatcaccccccccactccgactcaggaagtgacctc
atgtcctgtctgcggagccaggcgcgtctggtggtaaccacccagaactactataagctg
gtgacctgtgacctttcttctccgtcgcccccgagccctgcgggaagctccgcatcggtg
gccagctgctctgacgagcacagcaaggatagccctgcccctgacacgcccaccgccacc
cagccaaccgaatactacctgttcaggcggccaccgggaggagaggaggaggaggaagag
gaggaggaggaggaggaagaggaggagggaggagagtcatcacagcgtgatgaagatgag
gaagaaaatgatgaagacgagcaggatgggaagaagaggaagctgcaggagcagatgggt
ggagcctgttcagacccaatcattgagggccaggtgtacgtcaacatctcccctcctgtg
gttggccgaggacccatcggtggagggcccagccgcccccgttcccgtagctacgaccgg
aacctggacatggccccaccccctcggctcggctcattggagcgcatgctgagctgccct
gtccgtctcagtgagggcaccgcccccctgggcccgtcccctctgccgcgggtcacttcc
tttgccgagattgccaagagcaagaggaaaaatggaggaagcatgggctctccttctctc
aggatggggggaagttcagatcccttctcctccacccactcggcccactcccactcctcg
gccgacttctcccccatcctggagggcctgggtcagggtccgagccacagtttgcccttc
cagcgctgctacagccagggcagtgtggaccgccactcacctggtggtggcgtcagagag
acacgctccaaggccgaaggtggtctctccagctcttcatccagctcagcagtggtgcgt
tacactaaagaccagcgtcccaccaccctccccattcaacccttcaccttccaccaccag
ttctccaagccgccccagcccctgcttcccttgctgacaggctacgtctctgggatgcag
gcccggggtggagggccttcgggaggtccggaggggggtgaaggcgccaacgatccaggg
caagactcgatgcgttggtcccagggtagtggtggtgatgggatggtgtcagcagtggct
agcctcggtcctggctcggtccggccctcgccactgggtagctattccccggtccgcctc
cagggagcgacatccagctcagggacctgttctacctgtacccccagcccccagccaacc
cggagcctctcctgccccctctccaccgggctcctgccccttcaccataccccttcacca
gcggcaccagcggcagctgcccatctgccacccacacctccgcccccaacattgggggtg
aagcggggtgcggtgccccccatgttgcctccggtgcagggccaggtgcagggtcaccac
caccaccgtgggaccctgcccactttaccggccgttccccagaacagtgagacttcgctg
ggatacgaggagacgacattagactccctggaggggagcagaggaccagggcccaggaca
caacatgggcaccacctctctccacagactctgaaatggagggagtatcgtcgaaagaac
ccattaggggtggagaggtgttccttggggggctctgcagggtcaggcgatccgcctcta
tcaggcagtctggacgggaacggtcgtaggggcggggccgttggtcagcgaatcacaaga
cggaacgtgtttgacttccctccggcctctagtggccacaaccccctgggacgactcaat
ggccagtctgtgaagcagcagtactacagtgacttcctgccagactacttctccctgacc
gagcgtcctccagaagagttctgtctctctccggatgcctcctcttcctcatcatcctcc
tcttcctcacagtcccacatcgctgtggacctgcagcagaagagaggtttagtcaaagcc
attaatacagcggtagatttaatcgtagctcattttggcaccagtcgggaccctgatgtg
aaggcgaagctgggtaacagttgggtgagtcccaacgtgggtcacctgatcctaaagtac
ctgtgtccagctctaagggaggtgctgggggatgggctgaaggcctacgtcctggacctg
atcatcggacagagacgcaaccagccctggagcctggtagaggcctccacacaactaggc
ccatccacccgtgttctccacagcctgttctccaaagtgtcccagtactcagagttcacc
agccacagtatgagactcaatgcattcatcttcggactgctcaacctgcgatctttggac
ttttggttcaatcacctctacactcatgaagacatcgtagcgacccactaccacccgtgg
ggtttccttccgttgtcccagaggccctgccagcctctattcgaggagttccttctcctc
ctgcagcctctatccctattgccctttgaccttgaccttctctttgagccccgattggtc
cagaagggccaggaacaccgtagacgcaaggagcagctctgctccgcctccaccggcgag
gacctggaccaatcagcacgctccaccttccagctcatgagggggtggagcacagagtca
cggagggcggagtctatgagagataaaagggaagggggcggggtggggaagagagagagg
ctgggtctgagacgagagggaacatggcctaggatggaaggggttggagagagagggaat
agagaagggatgatgcagaggacagggtctaggagagaaggggcggggatggatcgttca
ggagcaggacttttagaagcacagccaatgacgacggaagtagggacagggtttgccaat
ctgtggagggagagtgggagggggaggggcatagtaaagagagcaaagggggtgggagga
gagagccagagggaaggggaaagtgagggagggaaggaggagaggaggaaggagagagag
agggattgggcggaggagggtcgtcagcggcaggagcgtgatcgccaggcgtgctggtgg
taccagctcatgcagagttcccaggtctacatcgaccaatcagctcaggggggctcaaag
tttgtcaagactgagaagaggaagaagtctgcggagaggcggagccagctcccgcccccc
agggagggcgtggtggaaggggcggagtctagccaggatgaggagggtctcagagagaga
gggagaagcaggaagagcagctccagctccagtggtgagtggacagggtccaggggaaga
ggaagactctcctggatggggagtcccccagagtcgctgctcacccaggacaaggagaac
gagacggaactgggggccccagtgacaggagcaccagaggcctcagtggcccagccagcg
acccaggctgagtgtccctcccagggcatgcgttggggtaggctgtttgggtccagcata
ggaggtggtggcaccccctccaggccagagcagagatcagccaaaagtcagagcaggctg
ccgtccggctggctgacaggtctggacatgtccgtgctggacctcgtagctcagacggtg
ggggtggggacaggtaagagggtggagccttcagctcctatggcccctcccactctgaac
caaccctctctacctcttcagacagcacaggagagccacacccaacaaccctgtgaagta
cgagccctgtgccaccacatagccacggagcctgaccagctgagtttccagaaaggggac
atactgagagtcctgagccgggccgactccgactggctcctctgctccctgggggcccag
cggggcctggtgcctttcatctatgttaccctgaggggcatggaggacagccaggtgccc
caatggcctcagggaccacactga
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integrated database retrieval system
