KEGG   Oncorhynchus masou masou (cherry salmon): 135513799
Entry
135513799         CDS       T10723                                 
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNFT2-like
  KO
K28516  E3 ubiquitin-protein ligase RNFT2
Organism
omm  Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:omm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:omm04121]
    135513799
Ubiquitin system [BR:omm04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    135513799
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-C3HC4_3 zf-RING_UBOX zf-C3HC4 zf-RING_5 zf-rbx1 zf-C3HC4_4 Prok-RING_4 zf-RING_6
Other DBs
NCBI-GeneID: 135513799
NCBI-ProteinID: XP_064792805
LinkDB
Position
25:12952701..12961700
AA seq 439 aa
MQRRHSSNTDGMPSERSRSQTLGSESSLDEGGVFDCLKPDSPTSPQQLFSGLVGVGVPSG
SGVPSANFQAAGLVLGTPPDVFIQMTASSREEGGPHRSECGPYLPRPPPHHHHNHHHFHQ
PLQHRTSGERHGNREEASEDPSTPAPALSELKPVVTWLQRGXPFILILLAKVCFQHKLGI
AVCIGMASTFAFANSSFKHQVSLREERSVVVALWMIMFLSGNIVYLYYTFSAEELYNSLM
FAKPNINSFDFFDLIWAVGITDFVLKYFTIGLKCFILFLPKILLAFKSRGKFYLVIEELS
QLFRALVPIQLWYKYIMGEDPSTSYFLGAMLIISYSLCKSFDLCGRVSAIRKAMAILCSS
QSYGVRASSQQCSEAGDVCAICQGDFRDPIVLLCQHVFCEECLCLWFDRERTCPLCRSAV
IETLHCWKDGTTSAHVQIY
NT seq 1320 nt   +upstreamnt  +downstreamnt
atgcagagaagacacagcagcaacacggatggcatgccctctgaaaggagccgtagccaa
acccttggatcagaaagcagcctggacgaaggaggtgtgtttgactgcctgaaacccgac
tcgcccacctccccccagcagctcttctccggcctggttggggtcggggttccctcggga
tctggtgtgccctccgcaaacttccaggcggctggtcttgttctggggactcctccagac
gtcttcatccagatgactgcctcctccagggaggaaggggggccacaccgctctgagtgt
gggccctacctcccccgcccgcccccgcaccatcatcacaaccaccaccacttccaccag
ccactacagcaccgtacatccggagagaggcatgggaacagggaggaggcctcggaagac
ccctctacaccggccccggccttgtcggagctgaagcctgtagtcacctggctacagagg
ggtntcccgttcatcctaatcctcctggctaaagtgtgttttcagcacaagctcggtatt
gctgtctgtattgggatggccagcacgtttgccttcgccaattcatcattcaagcaccag
gtgtcactacgggaggagaggtctgtggttgtagctctctggatgatcatgttcctatct
ggaaacatagtgtatctctactacacattcagtgctgaggagctgtacaacagtctgatg
tttgcaaagcccaacataaacagctttgacttctttgatctaatctgggcggtggggatc
accgactttgttctcaagtactttacaatcggcctgaagtgcttcatcctgtttctaccc
aagatcctcctggccttcaaatccaggggtaagttctacctggtgatagaggagctgagt
cagttgttcagggccttagtgcccatccagctgtggtacaagtacatcatgggagaggac
ccgtccaccagctacttcctaggagccatgctcattatcagctacagcctctgcaagtcg
tttgacctctgtggacgagtatcagccatacgcaaggccatggcaattctctgcagttct
cagagttatggtgtgagagccagcagccagcagtgcagtgaagccggagacgtgtgtgct
atttgtcagggcgacttcagagaccccatcgttcttctctgtcagcatgtgttctgtgag
gagtgcctgtgtctatggttcgaccgtgagcgaacgtgccccctgtgtcgatctgcggtc
atagagaccctgcactgctggaaggacggcaccacctctgcccacgtccagatctactag

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