Oncorhynchus masou masou (cherry salmon): 135513899
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Entry
135513899 CDS
T10723
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135513899
03041 Spliceosome [BR:
omm03041
]
135513899
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
135513899
Spliceosome [BR:
omm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
135513899
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Calcipressin
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
135513899
NCBI-ProteinID:
XP_064792971
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All DBs
Position
25:21073078..21083444
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AA seq
392 aa
AA seq
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MMMMMDDEQPKTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIFDTAGNDPYCFVEFYEH
RHAAASLSAMNGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTDDVKAAFG
PFGRISDARVVKDIATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPP
APKTTYETNTKHLAFDEVVNQSSPSNCTVYCGGVSTGLTEQLMRQTFTPFGQIMEIRVFP
DKGYSFVRFNSHEGAAHAIVSVNGTSIEGHMVKCYWGKETPDMISSMQQVQQVPQQNKVG
FAAQPYGQYAQWYGNAQQIGQYVPNGWQVPTYGVYGQAQAWNQQGFHHLLASAGWTGVSA
LGNGGVMEVTQGLNGSMLANQASMGATGYPTH
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatgatggacgacgaacagcccaaaaccctgtatgtagggaacctgtctagg
gatgtcactgagcccctcatcctacaggttttcacacagatcggcccctgcaagagctgt
aaaatgatttttgatactgcaggcaatgatccatactgctttgtggagttctatgaacac
aggcatgctgctgcttcgctgtctgccatgaatggacgtaaaattatgggtaaggaggtt
aaagtcaactgggccacaacaccaagcagtcagaagaaagacacaagcaatcatttccat
gtctttgttggagatctcagccccgaaatcacaacagatgatgtcaaagctgcctttggc
ccatttgggaggatatcggatgctcgtgtggtcaaagatattgccacagggaaatctaaa
ggctatggttttgtctctttcttcaacaagtgggatgcagagaatgccattcagcagatg
ggtggccaatggctaggtggcagacagatcaggaccaactgggccactagaaaaccccca
gcccctaaaaccacctatgaaaccaacaccaagcacctggcctttgatgaggtagtgaac
cagtcaagccccagtaactgcactgtttactgtgggggagtcagcactggtctaacagaa
caattgatgagacagaccttcaccccctttggacaaatcatggaaatccgtgtgttccca
gacaaaggatattcctttgtgaggtttaactctcacgagggagcagcccatgcaattgtg
tctgtgaatggtacttcgatagagggacatatggtgaagtgttactggggtaaagagacc
ccggacatgattagctctatgcagcaggttcagcaagttccccagcagaacaaagtgggc
tttgcagcccagccctatggccagtatgcccagtggtacggcaatgcccagcagattggc
cagtatgtccccaatgggtggcaggtacccacctatggcgtttacggccaggcccaggcc
tggaaccagcagggttttcatcacttactggccagtgctgggtggacaggtgtgagtgcc
ctcggtaatggtggggttatggaagttacacagggattgaatgggagtatgctagcaaac
caggccagtatgggagccacaggataccccacacactga
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