Oncorhynchus masou masou (cherry salmon): 135513969
Help
Entry
135513969 CDS
T10723
Name
(RefSeq) clathrin heavy chain 1-like
KO
K04646
clathrin heavy chain
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04142
Lysosome
omm04144
Endocytosis
omm05100
Bacterial invasion of epithelial cells
Brite
Membrane trafficking [BR:
omm04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
135513969
Exosome [BR:
omm04147
]
Exosomal proteins
Proteins found in most exosomes
135513969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135513969
NCBI-ProteinID:
XP_064793098
LinkDB
All DBs
Position
25:25535110..25568359
Genome browser
AA seq
1674 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGVNPANIGFSYLTMESDKFICIREKVGEQNQVVIIDMADPNN
PSRRPISADSAIMNPTSKVIALKAAKCLQIFNIEMKSKMKAHTMTEEVMFWKWISVNTVA
LVTEAAVYHWSMEGDSQPIKVFDRHVSLAGCQIINYRTDEQQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFGEFKVEGNTKASTLFCFAVRSQAGGKLHIIEVGHPATGN
QPFIKKAVDVFFPPEAQTDFPVAMQIGTKHGVIYLITKYGYIHLYDLESGVCIYMNRISA
ETIFVTAPHEPTSGIIGVNKKGQVLSVCVEEENIVNYATNVLQNPDLGLRMAMRSNLAGA
DELFARKFNTLFAQGSYSEAAKVAASTPKGILRTAETIRKFQSVPSQPGQASPLLQYFGI
LLDEGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECCEELGDLVKAVDPTLALSVYL
RANVPSKVIQCFAETGQFQKIVLYAKKVGYSPDWVFLLRNVMRVSPEQGLQFSQMLVADE
EPLANINQIVDVFMEGSLIQQCTSFLLDALKNNQPAEGHLQTRLLEMNLLHAPQVADAIL
GNQMFSHYDRAHIAQLCEKAGLLQRALEHYTDLFDIKRTLVHTHLLNPEWLVNFFGALSV
EDSIECLRAMLSANIRQNLQLCVQVASKYHEQLGTNALVDLFESFKSFEGVFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPDRVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNTLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLILVARGQF
STDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLKENTFY
DSTVVGKYCEKRDPHLACVAYERGQCDLDLIKVCNENSLFKSEARYLVRRKDPELWANVL
EENNPYRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNTS
AIQVLIEHISNLDRAYEFAECCNEAAVWSQLARAQLQRDLVKESIDSYIKADDPSAYMEV
VSAASKNDNWEDLVKFLQMARKKSRESYVETELIFALAKTGRLAELDEFVNGPNNAHIQQ
VGDRCFEEGMYDAAKLLYNNVSNFARLASTLVHLGEYQAAVDSARKANSTRTWKEVCFAC
VAGEEFRLAQICGLHIVIHADELEELISDYQDRGYYEELIALLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQSHLWAELVFLYDKYEEYDNAVLTMMS
HPTDAWKEVQFKDIIAKVANVELYYKSLSFYLDYKPLLTNDLLTILSPRLDHSRAVTYFT
KMNQLKLVKPYLRSVQSHNNKGVNEALNNLLTEEEDYQGLRASIDAYGNFDTIVLAQRLE
KHELIEFRRIAAYLYKGNNRWRQSVELCKKDKLYKDAMLYAAESMDAELAETLLQWFLEE
GRKECFAACLFASYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDKLEESESQR
KNEEKVPEPTPIVFGQQLMLTAGSAPVAPQPGYPGGYGYAAPGYPTPPPYSYNM
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatactgccgatacgatttcaggaacatctgcagctgcagaacctaggggtg
aatccggccaacatcgggttcagctacctgaccatggagtctgacaaattcatctgcatc
cgggagaaggtgggcgagcagaaccaggtggtgatcatagacatggctgaccccaataac
cccagcaggcgacccatttccgctgacagcgccattatgaaccctacaagcaaggtcatc
gccctgaaagctgctaagtgcctgcagatcttcaacattgagatgaagagtaagatgaag
gctcacactatgacagaggaagtcatgttctggaagtggatctctgtcaacaccgtcgcc
ttggtgactgaagcggctgtctaccattggagcatggagggggactctcagccaatcaag
gtgtttgatcggcacgtcagtctggccggttgccagatcataaactacagaacagacgaa
cagcagaagtggcttctgcttatcggtatctcggcacagcaaaaccgtgtggtgggggcc
atgcagctgtactctgtggacaggaaggtgtcccagcccatcgagggacatgctgcagcc
ttcggagagtttaaggtggagggcaacaccaaagcctccactctcttctgctttgctgtg
cgcagccaggctggtggcaagctgcatatcatagaggtgggtcacccggctacagggaac
cagccatttatcaagaaggcggttgatgtgttcttccctcctgaggcgcagacagacttc
cccgtcgccatgcagattggcaccaagcatggcgtgatctacctgatcactaagtatggc
tacatccacctgtatgatctggagtcgggagtgtgtatctatatgaaccgcatcagcgct
gagaccatcttcgtcactgccccccacgaacccacctccggcatcatcggggttaacaag
aagggacaggtgttgtcagtgtgtgtggaggaggagaacatagttaactatgccaccaac
gtgctgcagaacccagacctgggcctgaggatggccatgcgttctaacctggccggggca
gatgagttgtttgccaggaagttcaacacgctgttcgcccagggttcctactccgaggct
gccaaggtggctgcctccacaccaaagggtatcctgcgtacagcggagaccatccgtaag
ttccagagtgtgccaagccagccgggccaggcctctcccctgcttcagtactttggcatc
ctgctggacgaaggccagctcaacaagtttgagtctctggagctgtgcaggcccgtgcta
cagcagggacgcaagcaactgctggagaagtggctgaaagaggataagctggagtgttgt
gaggagcttggtgacctggttaaggcagtagatcctactctggccctcagcgtctacctc
agggccaacgtacccagcaaggtgatccagtgcttcgctgagaccggacagttccagaag
atagtgctttacgccaagaaggtgggctactctccagactgggtgtttctgttgaggaat
gtgatgcgggtcagtccagaacagggtctacagttctctcagatgctggttgcagatgag
gagcccctggccaacatcaaccagatagtggatgtgttcatggagggcagtctgatccag
cagtgcacctcattcctattggacgctctgaagaacaaccagccagccgagggacaccta
cagacacgcctactggaaatgaacctcctccatgctccccaggtggccgatgcaatcctg
ggaaaccagatgtttagtcactatgaccgagcccacatcgcccagctgtgtgagaaggct
gggctgctgcagagggctctagagcactacactgacctgttcgacatcaaaaggactctc
gtacacacacacctgctcaaccctgagtggctggtgaacttctttggcgccctgtcagta
gaggactctatagagtgtcttcgggccatgttatcagctaacatccgacagaaccttcag
ctgtgtgtccaggtggcatcgaaataccacgaacagctgggaacaaatgccctggtggat
ctcttcgagtccttcaagagctttgagggtgtgttctacttcctgggttccatagtgaac
tttagccaggaccccgacgttcattttaaatacatccaggcggcctgtaagaccggacag
atcaaggaggtggaacgcatctgtagagagagcaactgttacgacccggacagggtcaag
aatttcctcaaggaggctaaactgacagaccagctgcctctgatcatagtgtgtgaccgc
tttgactttgtccatgacctggttctctacctctaccgcaacactctgcagaagtacatt
gagatctatgttcagaaggtgaaccctagccggctgccggtggtgataggaggtctgttg
gatgtagactgtgctgaagatgtcattaagaacctgatcttggtggcgagaggacagttc
tccacagacgagctggtggcagaggtggagaagaggaacagactgaagctgttgttgccg
tggctggagtctcgtatccacgagggctgtgaggagccggctactcacaatgccttggct
aagatctacatagacagtaacaacaacccggagcgcttcctgaaggagaacaccttctac
gacagcactgtagtggggaagtattgtgagaagagagacccccacctcgcctgtgtcgcc
tacgagaggggccagtgtgacctggaccttatcaaggtgtgcaatgagaactccctgttc
aagagtgaggctcgctacctggtcagacggaaagacccagaactatgggccaatgttcta
gaggagaacaacccttatagacggcaactcatagaccaggtggtgcagacagctctgtca
gagacccaggacccagaggaggtatcggtgactgtcaaggcctttatgacagctgacctg
cccaatgagctcatcgaactactggagaagattgtattggacaactcagtcttcagcgag
caccgaaacctccagaacctgttgatcctgacggccatcaaggcagaccggacacgtgtg
atggagtacatcaaccgcctagacaactacgacgccccagacatcgctaacatcgccatc
agcaacgagctcttcgaggaggccttcgccatcttcaaaaagtttgacgtcaacacctct
gccattcaggttctgatcgagcatatcagtaacctggacagagcctatgagtttgcagag
tgttgtaatgaggctgctgtatggagtcagctggccagagcccagctccagagagacctg
gttaaagagtccatcgactcctacatcaaagctgacgacccgtcagcctacatggaggtg
gtcagcgcggccagcaagaacgataactgggaggatctggtgaagttccttcagatggct
cgtaagaagtcccgggagtcctacgtagagacagaactcatctttgctctggctaaaact
ggcagactggccgaactagatgagtttgttaacggccctaacaatgcccatatacaacag
gtgggagataggtgttttgaggagggcatgtatgatgctgccaagctgctgtataataat
gtgtccaactttgcccgcctggcgtccacgctggtccacctaggagagtaccaggctgct
gtagacagcgccaggaaagccaacagcacacgcacctggaaggaggtgtgttttgcgtgt
gtggctggggaggagtttcggttggctcagatctgtggtcttcacatcgtcatccacgct
gatgaactggaggagctcatcagtgactatcaggaccggggctattatgaggagctgata
gccctgttggaggcagcattgggtttggagcgcgctcacatgggcatgttcacagagctg
gccatcctctactccaaattcaaaccccagaagatgagagaacatctggaactcttctgg
tcccgtgtcaacatccctaaggtgctgcgagcggcggagcagtcccacctgtgggcggag
ctagtgtttctgtatgataaatacgaggagtatgacaatgctgtcctcacgatgatgtca
caccctactgacgcatggaaggaggtgcagttcaaggacatcatcgccaaggtggccaat
gtggagctgtactacaaatccctttccttttacctggattacaaacctctgctgacaaac
gaccttctgaccatactgtcaccacggttagatcacagccgggcagtcacatacttcacc
aagatgaaccagttgaagttggtaaagccttacctgcggtcagtccagagtcacaacaac
aagggagtcaacgaggccctcaataacctactgacagaggaggaggactaccagggtctg
agggcatcgatcgatgcgtatggtaactttgacaccattgttctggcccagagactggag
aagcatgagctgattgagttcagacgcatagcagcatacctctacaaaggcaacaaccgc
tggagacagagcgtggaactctgcaagaaggacaaattatacaaggatgcaatgctgtat
gctgccgagtctatggatgcagagttggctgagaccctgctgcagtggttcctggaggag
ggtaggaaggagtgtttcgctgcctgtctgtttgcctcctatgacctgctgcaccctgat
gtggtgctggagctggcctggagacacaacatcatggactttgccatgccatacttcatc
caggtcatgagggagtacctcaccaaggtggacaaactggaggagtcagaaagccaaagg
aagaatgaggaaaaagtcccagaacccacccccatagtgtttggtcaacagctgatgttg
acagcaggttctgctccagtggctccccagccaggatatccaggaggctatggatatgct
gctccaggctatcccaccccgcccccctacagctacaacatgtag
DBGET
integrated database retrieval system
