Oncorhynchus masou masou (cherry salmon): 135514026
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Entry
135514026 CDS
T10723
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 1-like isoform X1
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
135514026
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omm02000
]
135514026
Transporters [BR:
omm02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
135514026
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
135514026
NCBI-ProteinID:
XP_064793232
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Position
3:28329096..28413990
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AA seq
650 aa
AA seq
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MSESNSNAACTADQNGAVPGEPVKTDKNSRRGNWGNQIEFILTSVGYAVGLGNVWRFPYL
CYRNGGGAFMFPYFIMLVFCGIPLFFLELSFGQFASQGCLGVWRISPMFKGVGYGMMVVS
TYIGIYYNVVICIAFYYFFSSMTNLLPWTYCNNPWNTPTCNGVVTPRGINNTLANVTRSL
VTGAAEVAVEVVNKTKRTSPSEEYWKHYVLQISDDIGNFGEVRLPILGCLAVSWVVVFLC
LIRGVKSSGKVVYFTATFPYVVLTILFIRGITLEGAVTGIKYYLTPQWHKILDAKVWGDA
ASQIFYSLGCAWGGLITMASYNKFHNNCYRDSIIISITNCATSVYAGFVIFSILGFMAHH
LNVDVSEVADHGPGLAFVAYPEALTLLPISPLWSLLFFFMLILLGLGTQFCLLETLVTAI
VDEIGTDWIVRNKTVVTGGVAIVGFLLGVPLTTQAGIYWLLLMDNYAASFSLVIISCIMC
ICIMYVYGHKKYFKDVEMMLGFPPPIFFRVCWRFVSPIIISFILIFTVIQYKPITYNDYV
YPGWSLAIGFLMAMSSVICIPIYALYKIAKSEGTTFLERLKNSCKPDVKWGPALSEHRIG
LYATPGSEGEVEVRPLKEELKEREDEKRDEISLTIQGSNGSTAHNTTPSA
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagtccaacagcaatgcagcctgtacagccgaccagaatggagctgttccagga
gaacctgtgaagacggataagaactccaggagagggaactggggaaaccagatagagttt
atcctcaccagcgtgggctatgccgtgggcctgggaaacgtatggaggttcccctacctc
tgctacagaaatggaggaggagccttcatgttcccctacttcatcatgctggtgttctgt
gggatccccctgttcttcctggagctctcatttggacagtttgccagccagggatgtctg
ggggtttggaggatcagccccatgttcaaaggtgtgggctacgggatgatggtggtgtcc
acctacatcggtatctactacaacgtggtgatctgcattgccttctactatttcttctct
tccatgaccaacctcctgccgtggacctactgcaacaacccctggaacacacccacctgc
aacggtgtggtgactcccaggggcatcaacaacaccttggccaacgtcacccgcagcttg
gtcaccggggccgctgaggttgccgtggaggtggtcaataagaccaagaggaccagcccc
agcgaggagtactggaaacactacgttctgcagatctcagacgacatcgggaatttcggt
gaagtccgtctccctattctgggatgtctggccgtgtcatgggtggtggtcttcctctgt
ctcattagaggagtcaaatcttcaggcaaggtggtgtacttcacagccacattcccctac
gtggtgctgaccatcctcttcatcagaggcatcaccctggagggagctgtcaccggcatc
aagtactaccttaccccacagtggcataagatccttgacgctaaggtgtggggagacgct
gcctctcagatcttctactctctgggctgtgcatggggtgggctcatcactatggcctcc
tacaacaagttccacaacaactgctacagagacagcatcatcatcagcatcaccaactgt
gcgaccagcgtgtatgcaggctttgtcatcttctccatcctgggcttcatggcccaccac
ctgaacgtagatgtatctgaggtggccgaccacggtcccggcctggccttcgtcgcctac
ccagaggccctcactctgctgcccatctcccccctctggtccctgctcttcttctttatg
ctcatcctgctgggcctggggacgcagttctgcctgctggagaccctggtgacagccatt
gtggatgagattggtactgattggatcgttaggaacaagacggtagtcacaggaggagtg
gctatagtgggcttcctgctgggtgtgccgctcaccacacaggctgggatctactggctg
ctgctgatggataactatgctgctagtttctctctggttatcatctcctgcataatgtgc
atctgtatcatgtacgtctatggacacaagaaatacttcaaggatgttgagatgatgctg
ggtttcccccctccaatcttcttccgggtctgctggagattcgtgtcccccatcatcata
tcttttatcctgatcttcacagtgatccagtacaagccgatcacctacaacgactatgtg
taccccggctggtctctggccatcggcttccttatggccatgtcctccgtcatctgcata
cccatctatgctctctacaagatcgccaagtctgagggaaccacatttttagagcggttg
aagaattcgtgcaagccagacgtgaaatggggcccggccctgagtgagcatcggataggc
ctctacgccaccccaggctcagagggagaggtggaggtgcgtcccctgaaagaggagctg
aaggagagggaggatgagaagagggatgagatcagcctcaccatccagggcagcaacggc
tcaacagcacacaacactacccccagcgcatag
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