Oncorhynchus masou masou (cherry salmon): 135514139
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Entry
135514139 CDS
T10723
Name
(RefSeq) tenascin-N-like
KO
K06252
tenascin
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04510
Focal adhesion
omm04512
ECM-receptor interaction
omm04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135514139
04518 Integrin signaling
135514139
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135514139
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
omm00536
]
135514139
Glycosaminoglycan binding proteins [BR:
omm00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
135514139
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
EGF_Tenascin
Fn3_Dep-1_3rd
EGF_2
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
DUF7949
Interfer-bind
hEGF
Motif
Other DBs
NCBI-GeneID:
135514139
NCBI-ProteinID:
XP_064793451
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All DBs
Position
3:28972886..29002386
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AA seq
1244 aa
AA seq
DB search
MTTRLHWLTRALCLISILCTVTSKYVTEDYSSPAEKEVTFSHVYKIDLAKSPECKLALQT
LPSQQDQFSGLQELEGGTTLEGENNIVFRHQINLKTPKCDCDESESFTSLLYRVNGLEEE
VEHLKSQCSQGCCGGKGGGAGGVDTSCSGHGTYQHNTCSCQCNPSWEGPDCSISTCPDEC
NDNGRCVDGKCVCHAGYTGSDCSQLMCPGDCNDKGHCVDGKCVCHAGYTGSDCSQLMCPG
DCNDKGHCVDGKCVCHAGYTGSDCSQLMCPGDCNDKGHCVDGKCVCHAGYTGSDCSQLMC
PGDCNDKGHCVDGKCVCHAGYTGSDCSQLMCPGDCNDKGHCVDGKCVCFSHFTGEDCSQQ
NCDPDCIHGSCVNGMCICDEGFFGEDCSTVSGPNGLRLVRVTDNSLLVEWEAVKAAEYYI
LTWHPEGNEAELERFTVPNTETSYLITGLSPGVSYIVQVYAVIKEIQSEGDRIEATTEVS
GIDGIRVLGQTEDSIQVDWQNPAAPLDHFRLTYANPDGQEEEQNVPMSAEARTTHTIVGL
HPGTEYLITVQGIKGTIEGKASFATGVTDLDDPTNLLTKEVTEDTATVEWQKIQAEIDGY
LISYSSAEGSSGEIPVGADSTSYRLTGLKPGVLYTVYIWAVKGSRVSRKSSTEAETELDV
PTNLLTREVTEDTATVTWDKVQAEIDGYLISYSSAEGSSGEIPVGADSTSYRLTGLRPGV
LYTVYIWAVKGSRVSRKSSTEAETELDVPTNLLTREVTEDTATVTWDKVQAEIDGYLISY
SSAEGSSGEIPVGADSTSYRLTGLRPGVLYTVYIWAVKGSRVSRKSFIDAETDLDAPTNL
FTREVTEDTADVSWDRPLADIDGYLISYSSAEGSSGEIPVGADSTSYRLTGLRPGVIYTV
YIWAVKGFRVSRKSSTETETEIDAPKNLKASDVKLNVANLTWTAPLARIDGYILTLRAED
GSLKAVEKTLRAGESSFAMSGLEKGKNYIVTLLAYRGPKRSRVIEITFKTVGLLYPFPMD
CTQIKKNGNMASGIYTIYVNSDRTKPMEVYCDMDTDGGGWVVFQRRNNGQMDFMKRWRQY
MAGFGNMTDEFWLGLDNIYELTNTPTQYELRVDLGVGSEKAYAVYDNFKIAPAKQKFKLT
IGEYSGTAGDAMSYHQGHPFSTVDNDNDISLGNCALTHRGAWWYKNCHLANLNGKFGDNR
HSMGVNWEPWKGHLMSLDFTEMKIRPVGTARKRRSLRSSTAPRK
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atgaccactagacttcactggctcacaagagccctatgcctgataagcatactgtgcact
gtcacttccaagtatgtgacagaagattattcatcccccgctgagaaagaagtcaccttc
agccacgtctataagattgacctggccaagagccctgagtgtaaactcgccttgcagacc
ctcccttcccaacaggaccagttttcaggcctgcaagagctggaagggggcactactctg
gagggggaaaacaacatagttttcaggcaccaaatcaacctcaagaccccaaagtgtgac
tgtgatgagtcggagagctttacgtctctgctgtacagagtcaacgggctggaggaggag
gtggaacatctgaagagtcagtgctcccagggctgctgtggtggaaaaggtggtggagca
ggaggtgtggacactagctgtagtggccacgggacctaccagcacaacacctgcagttgt
caatgcaaccctagctgggagggtcctgactgctccatttccacctgtcctgatgagtgc
aacgacaacggccgctgtgtggatggcaagtgtgtctgccacgctggctatacggggagt
gactgcagccagctgatgtgcccaggcgactgcaacgataagggacactgtgtggacggc
aagtgtgtctgccacgctggctatacggggagtgactgcagccagctgatgtgcccaggc
gactgcaacgataagggacactgtgtggacggcaagtgtgtctgccacgctggctatacg
gggagtgactgcagccagctgatgtgcccaggcgactgcaacgataagggacactgtgtg
gacggcaagtgtgtctgccacgctggctatacggggagtgactgcagccagctgatgtgc
ccaggcgactgcaacgataagggacactgtgtggacggcaagtgtgtctgccacgctggc
tatacggggagtgactgcagccagctgatgtgcccaggcgactgcaacgataagggacac
tgtgtggacggcaagtgtgtgtgcttcagccacttcactggcgaggactgcagccaacag
aactgcgatcctgactgcatccatggcagctgcgtgaacggaatgtgtatctgtgacgaa
ggcttctttggggaagactgctctacagtgtcgggccctaacggcctgcgtctggtaagg
gtgactgataattctctgctggtggaatgggaggctgtgaaagcagcagagtactacatc
ctgacctggcaccctgagggcaatgaggcagagctggagcggttcaccgtgcccaacaca
gagacctcctacctgatcacaggactcagcccaggtgtctcctacatagtgcaggtgtac
gctgtcatcaaggagatccagagcgagggggacaggatcgaggcgaccacagaggtgtct
ggtattgatggtatccgggtattgggccagactgaggactctatccaggtggactggcag
aaccctgcagcacctctggaccacttcagactgacctatgctaaccctgacgggcaggag
gaggagcagaatgtaccaatgagtgcagaggccaggaccacccacaccatcgtaggactg
caccctggcactgagtacctcatcacagtgcaaggcatcaaagggaccatcgaagggaaa
gcctccttcgccaccggggtcacagatcttgacgatcctacaaacctcttgaccaaagaa
gtgacagaggataccgctaccgtggaatggcagaagatacaagcagagatcgacggctac
ctgatcagctacagctctgctgagggctccagtggggagatccctgttggggcagacagc
acctcctacaggctgactgggctgaagcctggagtcctctacacagtctacatctgggct
gtcaagggctcccgggtcagcaggaagagctccacagaagctgagacagaactagatgtt
cctactaacctgttgaccagagaagtgacagaagacacagcgacagtaacatgggataaa
gtccaggctgaaatcgacggctacctgatcagctacagctctgctgagggctccagcggg
gagatccctgttggggcagacagcacctcctacaggctgactgggctgaggcctggagtc
ctctacacagtctacatctgggctgtcaagggctcccgggtcagcaggaagagctccaca
gaagctgagacagaactagatgttcctactaacctgttgaccagagaagtgacagaagac
acagcgacagtaacatgggataaagtccaggctgaaatcgacggctacctgatcagctac
agctctgctgagggctccagtggggagatccctgttggggcagacagcacctcctacagg
ctgactgggctgaggcctggagtcctctacacagtctacatctgggctgtcaagggctcc
cgggtcagcaggaagagcttcattgacgctgagacagatctggatgctcctactaacctc
tttaccagagaagtgacagaagacacagctgatgtgtcgtgggacagacctttagcagat
attgacggctacctgatcagctacagctctgctgagggctccagtggggagatccctgtt
ggggcagacagcacctcctacaggctgactgggctgaggcctggagtcatctacacagtc
tacatctgggctgtcaagggcttccgggtcagcaggaagagctccacagaaacggagaca
gaaattgacgcaccaaaaaacctgaaagcatcggatgttaaactgaatgtagctaacctg
acctggactgctcccttagccagaatcgatggctacatcctcacattgagagctgaggat
ggcagtttgaaggctgtggagaagacgctgagggcaggagagagcagctttgccatgtcg
ggcctggagaaaggaaagaactacattgttaccctccttgcttacagaggaccaaagagg
agcagagtgatagagatcacattcaaaacagtgggtttgttgtacccattccccatggac
tgtactcagattaagaagaatggtaacatggcaagtggaatctacaccatttacgtcaac
agtgatcgcaccaagcccatggaggtgtactgtgacatggacactgatggcggtggatgg
gtggtgttccagagacgcaacaatggacagatggacttcatgaagcgctggagacagtac
atggctggttttgggaatatgactgatgaattttggcttggtctggacaatatctatgag
ctgaccaatactccgacgcagtacgagctgcgagtggaccttggtgtgggttcagagaag
gcctatgctgtctatgacaacttcaagatagccccggctaagcagaagttcaagctgacc
atcggtgaatacagtggaacagcaggcgatgccatgagctaccatcaaggtcaccccttc
tccacggttgacaatgacaatgacatttctcttggtaactgtgccctgacacatcgtggt
gcatggtggtacaaaaactgtcaccttgccaacctcaacggcaaattcggagacaacaga
cacagcatgggtgtgaactgggagccatggaagggtcacctgatgtctcttgatttcact
gagatgaagattcggcctgtgggcactgccaggaagaggaggtcgcttagaagcagtaca
gctcccagaaaatag
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