Oncorhynchus masou masou (cherry salmon): 135514159
Help
Entry
135514159 CDS
T10723
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1-like isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135514159
Membrane trafficking [BR:
omm04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
135514159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
135514159
NCBI-ProteinID:
XP_064793472
LinkDB
All DBs
Position
25:32814563..32844285
Genome browser
AA seq
1450 aa
AA seq
DB search
MVKPDIHTLAHHLKQERLYVASEKQLIQRLNGDVLKTAERLYRAAWITKQQRINLDRLIL
TSAEASPAECCQHAKVLEDTQFLDGYKTLGFQESIYGEFLGRVRENPRLLASCLVAGERL
NQEHTQGVIYTVFTSLYGNCIMQEDERYLLQVLRYLVEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLYSAKLFLTATLHEPIMQLLVEDEDHLETDPSKVMERFTPAQQERLFGEKGS
EGYRQKVAAAVEANEAKLVTLVNKFIGYLKQNTYCFPHNLRWIVSQMYKTLSCVERLEVG
EVRTMCTDLLLTCFICPAIVNPEQYGIISDAPINEVARFNLMQVGQLLQQLAMADDDADP
RRKNSLAKFDKSCVAAFLDVVIGGRAVETPPMSSMNLLEGLSRTVAYMTHSQLLCLVDFV
RSVMAGDHLREEEHMLLETMLANVPQSRTVKSNSLELTPSNTPQLSPATTPANKKNRNIA
ASRSRSRSELAQQGEAEASSLESLQEVMPEEVLVISLGSSPQTIPGMMSENEVLTMQLTD
GSQGDTPADDTKHHGKPDKTLRFSLCSDNLEGISEGPSNRSNSVSSLDLEGESVSELGAG
PSGSNGVEALQLLEHEHATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVLGS
DFDPNMDEDRLQEIAGATVENMLGSLLCLPGSSSVLLDPYGSTISETTSEAWSVEVLPSD
SEAPDLKQEERLQELESCSGLGSTSDDTEVREVSSRPSTPGLSVISATSEDRGKTEDLRS
ECSSDFGGKDSVTSPDGEESSHGAHHSLASPASQADSLLAMFDPLSSGEGFSTGTIVRPK
VHYARPLHPPPDPPIPETCALGQEPRYSLFTPHCLAQAELEHTKQRHSYPDRLVRSRSSD
IVCQGRRPTSDPGLNRRAAAEERDPAGHFSMGPSSSPSKDSLKGEVEERKDSDEEKSDRN
RPWWKKRFQSAIPKVLYWTAESEVPAPIAFRKRDRQEKDDVCHERVPQDDTLSRNSQAQA
AEDILDKYRNIKRTSPSEGATAAAYDTTGELCGEEGLHDEALQNMSTDDLPDSASQTAQQ
HDSSKFSFSDAKKKLRLALCSADSVAFPLMAPATTRNGLPDHTDSEDNEIVCFLKVQLAE
AINLQDKNQMAQIQETTRCVSRFDARTCRKLLAAIAEDYRKRAPYIAYLTRCRQGLQTSQ
AHLERLLQRVLRDKEVANRYFTTVCVRLLLEHMEAKSLDFIKAFQGCTASDDKTAAVEDF
LRYLYGAMAHDAIWQYASEDQLQDAQMAIERSVMNRIFKLAFYPNQDGDILRDQLLQEHI
ARLSKVVTANHKALQIPEVYAREAPWPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNLL
SLANEDSVPGADDFVPVLVFVLIKANPPCLLSTIQYINNFYASRLSGEECYWWMQFTAAV
EFIKTIDDRK
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagccagacatccacactctggcccaccacctgaagcaggagcggctgtatgtg
gcttcagagaagcagctgatccaacggctcaacggggacgtgctgaagactgctgagagg
ctgtaccgtgctgcctggatcaccaaacagcagaggatcaacctcgaccggctcattctc
accagtgctgaggcatccccggccgaatgctgccaacatgccaaagtgctggaggacacg
cagttcctggacggctacaagactctgggctttcaggagagcatctatggggagttcctg
ggtcgggtgcgcgagaaccctcggctgttggcctcctgcctggtggctggggagaggctg
aaccaggagcacacacagggggtcatttacacggtcttcacctccctctacggtaactgt
atcatgcaggaggatgagcgctacctgctgcaggtcctccgctacttggtggagtttgag
ctgaaggaaagcgacaaccctcggcggctgctgcggcggggcacgtgcgccttcagcatc
ctcttcaagctcttctccgaggggctgtactccgccaagcttttcctcaccgccaccctc
cacgagcccatcatgcagctgctggtggaggacgaggaccacctggagacggacccctcc
aaggtgatggagcgtttcacgccggcccagcaggagcgcctgtttggggagaagggctcg
gagggctacagacagaaggtggcagctgccgtggaagccaacgaggccaagctggtgacc
ctggtcaacaagttcatcggctacctgaagcagaacacctactgcttcccccacaacctg
cgctggatagtgtctcagatgtacaagacgctatcgtgcgtggaacggctcgaggtgggt
gaggtgcggaccatgtgcacggacctgctgctcacctgcttcatctgcccagccatagtc
aaccctgagcagtacggcatcatctcagatgcccctatcaacgaggtggctcgcttcaac
ctcatgcaggtagggcagcttcttcaacagttggcaatggctgacgatgatgcagacccc
cggaggaaaaacagtttggccaagttcgataagagctgtgtagctgccttcttggatgtg
gtaatcggagggagagctgtggagacaccgcccatgtcctccatgaacctactagaagga
ctcagcaggactgtggcgtacatgacacacagtcagctcctctgcctggtggactttgta
cggagtgtgatggcaggggaccacctccgggaggaggagcacatgctcctggagaccatg
ctggccaacgttccccagtcccgcacagtgaagagcaacagtctggagctcaccccctcc
aacaccccccagctctccccagccaccacccctgccaacaaaaaaaacaggaacatagca
gcctcccgcagtcgtagccgttccgagctggcccagcagggggaggcagaggctagctct
ctggagtccctgcaggaggttatgccagaggaggtgctggtgatctcactaggaagcagc
ccgcagaccatccctgggatgatgtcagagaatgaggtgttgaccatgcagctgactgat
gggtcacaaggggacactcctgcagatgacaccaagcaccatggcaagccagacaaaacc
ctacgcttctccctctgcagtgacaacctggagggcatctcagagggtccatccaaccgg
tctaactccgtgtcgtctctggacctggagggagagtctgtgtctgagctgggagctggg
ccatcagggagcaatggggtggaggctctacaactgctggagcatgaacatgccaccact
caggacaacctggatgacaaactgcgtaagtttgagatccgcgacatgatgggcctgaca
gatgaccgggacatctctgagacagtgagtgagacctggagcacagatgtgctgggcagt
gactttgaccccaacatggatgaggatcgactgcaggaaatagctggggcgactgttgag
aacatgctgggcagcctgctgtgcctaccaggctccagctcagtgctgctagacccttat
ggatccaccatctcagagaccaccagcgaggcctggagtgtcgaggtcctgcccagcgac
tcagaagccccagatctgaagcaggaagagcgtctacaggagttggagagctgctcaggg
ctgggcagcacctccgatgacacagaggtcagagaggtcagctcccggcccagcacccca
gggctcagtgtcatctcagcaacatcagaagatagaggcaagacggaggacctgcggtcg
gagtgcagctcggactttggggggaaggactctgtgaccagtccagatggggaggagtcg
tcccacggcgcacaccacagtttggcttctccggcctcgcaggcagactccttactggcc
atgttcgatcccctatcctccggggaaggtttctctactggtaccatcgtgaggcccaaa
gtgcactacgccaggccccttcatcctccccctgaccctcccatcccagagacctgtgcc
ctgggccaggagccccgctactccctgttcacgccccactgcctggcccaagccgagctg
gagcacaccaagcagcgccactcctacccagacaggctggtacgcagtcgcagctctgac
attgtctgccaaggccgccggcctaccagcgacccgggcctcaaccgcagagcggcagcc
gaggagcgggatcctgccgggcacttctccatggggccgtcctcgtcccctagcaaggat
tccctaaaaggagaggttgaggagagaaaggacagtgatgaggaaaagtctgatcgcaac
agaccatggtggaagaaacgctttcagtcagccattcccaaagtgctgtattggacggct
gagagtgaagtcccagctccgatagccttccggaaaagggacaggcaggagaaagacgat
gtgtgccatgaacgcgtcccacaagatgacactctgtccaggaactcccaggcccaggca
gcagaagacatcctggacaaatacaggaacatcaagaggaccagccctagtgaaggagcc
accgctgcagcctatgacaccacaggagagctgtgtggagaggagggtttacacgacgaa
gctctgcagaacatgtccacagacgacctgccagactcagccagccagacagcccagcaa
cacgactccagcaagttctcattcagtgatgcaaagaagaagttgagactggccttgtgt
tcagcagactctgtggctttccccctcatggctcctgccaccacgcgcaatgggctgcca
gaccacacggactctgaagacaatgagatcgtgtgcttcctgaaggtccagctggcggag
gccatcaacctgcaggataagaaccagatggcccagatccaggagaccactcgctgcgtc
agccgcttcgacgcacgtacctgcaggaagctgctggcagccatcgccgaggattacagg
aagcgggcgccctacatagcgtatctgacgcggtgtcgacaaggcctgcagacgtcccag
gcccacctggagcggctgctgcagcgggtgctgagggacaaggaggtggcaaaccgctac
ttcaccacagtctgtgttcgcctcctactggaacacatggaggcgaagtccctggacttc
atcaaagccttccaggggtgcacagcgtcagacgacaagacggcggcggtggaggacttc
ctgcgctacctttatggggccatggcccatgatgccatctggcagtacgccagcgaggac
cagctgcaggatgcccagatggccatagagcgcagcgtcatgaaccgcatcttcaagctg
gccttctaccccaaccaggacggggacatcctgagagaccagcttctacaggaacacata
gcgcgtctctcaaaggtggtgacggcaaatcacaaagctcttcaaatcccagaggtgtat
gcgagggaggctccctggccgtctgcccagtcagagatccggaccatcagtgcctacaag
actcctcgggacaaagtgcagtgtatcctgcgcatgtgttccaccatcatgaacctcctg
agtctggccaacgaagactctgtccccggagctgacgacttcgtccctgtgctcgtcttt
gtcctgataaaggcaaacccgccctgcctgctgtccactattcagtacatcaataatttc
tacgccagccggctgagtggggaggagtgctattggtggatgcagttcaccgcggcagtg
gaattcattaagaccatcgatgatcgcaagtga
DBGET
integrated database retrieval system
