Oncorhynchus masou masou (cherry salmon): 135514193
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Entry
135514193 CDS
T10723
Symbol
hnf1a
Name
(RefSeq) hepatocyte nuclear factor 1-alpha isoform X1
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135514193 (hnf1a)
Transcription factors [BR:
omm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
135514193 (hnf1a)
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Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
HTH_37
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
135514193
NCBI-ProteinID:
XP_064793556
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Position
25:complement(35508627..35516117)
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AA seq
558 aa
AA seq
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MEGEERKGEAGPGPGRLSALQEQLIWALLGSGLSREVLVHALGELERERVTPGAEKGDRG
DGESSEEGEMDFPPPIFQELEALAPEEAARQRALVDQLLQEDPWRVAKLVKSYMQQHNLP
QREVVESTGLNQSHLSQHLNKGTPMKNQKRAALYSWYVRKQGEISQQFTNARHALGSGEE
QGEDVRKGRRNRFKWGPASQQILFHAYERQRNPSKEEREGLVEECNRAECLQRGVSPSQL
AGLGSNLVTEVRVYNWFANRRKEEAFRHKLALDMPYNSQSASSTNHTLSHSPEQGMKYSQ
QITCDNLGSSRGHNGDRGLGGRLASPIQLEPSHTLLETHHHKPVSGGGPLPPVSTLTSLH
SLSSSPAPHHGLIMTSLPSVMSLGESSLLIGQTVPVINNVGGGFTTLQPISFQQQLHSTS
QQQLTQQFQSHMGHHSPFMATMTQLPCHMYSKSDMSHYPPSSLLSQAMVITDSSSLGTLT
SLTTVRQILTTDPEEQTDQPIQEDSLHLQSPSPVPISSGNLQLYPPSQSSETHPPHRLSS
SPADINSYIPAQMVSTAQ
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggagggagaggagaggaaaggagaagcagggcccggccctgggcgtctgtctgctctc
caggagcagttgatctgggctctgctgggctctggactgtcccgggaggtcctggtccat
gccctgggagaactggagcgagagagggtcacccctggagcagagaagggggacaggggg
gatggcgagagttcggaggagggagaaatggattttccaccccccatattccaggagctg
gaggccctagccccagaggaggcagccaggcagagggctctggtcgaccaactgcttcag
gaggatccatggcgcgtggcaaaactagtgaagagctacatgcagcagcataacctcccc
cagagagaggtggtcgagtccacaggcctcaaccagtcccatctctcccagcacctcaac
aaaggcacgcccatgaagaaccagaaacgggctgctttgtacagctggtacgtcaggaag
cagggcgagattagccagcagtttactaatgccaggcatgcccttgggtctggagaggag
cagggagaggatgtgaggaagggacgtaggaacaggttcaaatggggacccgcctcccag
caaatcctcttccacgcctatgaacgacagaggaacccaagcaaagaggagagagaggga
ttagtggaggagtgtaacagggctgagtgtcttcagaggggtgtgtctccgtcccagctg
gctggcctgggctctaacctggtgacagaggtacgagtgtacaactggttcgctaaccgc
cgcaaggaggaggccttccgccataaactggctcttgatatgccttacaacagccaatca
gcaagctccaccaaccacacactctcacacagccctgagcaaggcatgaagtatagccag
caaatcacatgtgacaatctggggtcatcgaggggtcacaatggagacagaggcttgggg
ggccgcctggccagccccattcaactggagcccagccacacactcctggaaacacaccat
cacaaaccagtatcaggtggtggccccttgcccccagtcagcaccctgacatcactgcac
agtctgtcttcctcgcctgctccccaccatggactcatcatgacctccctgcccagcgtc
atgagtctgggagagtcctctctcctcataggtcaaaccgtacctgtcatcaacaacgtg
ggaggcgggttcaccacccttcagccaatctctttccagcagcagcttcattccacttcc
cagcagcaactcacacagcagttccagagtcacatgggccaccacagtcctttcatggca
accatgacacagcttccatgtcacatgtacagcaagtctgatatgtcccactaccctccg
tccagcctactgtcccaagcaatggtcatcactgacagcagcagccttggaacactgacc
agtctaaccacagtcagacagattctgaccacagaccctgaggagcagacagaccaaccc
atccaagaggactccctacacctgcagtccccttcacctgtgccaatttcctctgggaat
ttacagctgtatcctccatctcagtctagtgaaactcatccacctcaccgcctctcctct
tcgccagcagacatcaactcctacattcctgcacagatggtctctaccgcacagtag
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