Oncorhynchus masou masou (cherry salmon): 135514304
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Entry
135514304 CDS
T10723
Name
(RefSeq) laminin subunit gamma-1-like
KO
K05635
laminin, gamma 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04510
Focal adhesion
omm04512
ECM-receptor interaction
omm04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135514304
04518 Integrin signaling
135514304
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135514304
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
CC_Bre1
EGF_Teneurin
F420_ligase
FitA-like_RHH
Alanine_zipper
Motif
Other DBs
NCBI-GeneID:
135514304
NCBI-ProteinID:
XP_064793768
LinkDB
All DBs
Position
3:30128365..30203747
Genome browser
AA seq
1595 aa
AA seq
DB search
MRWFIQVVFSLTCLAICSHSAMDECTDDSSRPQRCMPEFVNAAFNVTVVATNTCGSPPEE
YCVQTGVTGVTKSCHICDARDRRQHHSAVYLTDYNNQQDTTWWQSQTMLAGIQYPNSINL
TLHLGKAFDITYVRLKFHTSRPESFAIYKRTSEDGPWTPYQYYSGSCEKTYQKFNRGFIR
TGEDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTATDIKVTLNR
LNTFGDEVFNDPKVLKSYYYAVSDFAVGGRCKCNGHASECVKNNGFDKPVCNCKHNTEGD
DCNVCKPFYNDRPWRRATANNPNECLKCNCNGKSAECYFDPELYRATGHGGHCRNCADNT
DGPNCERCLDNHYRDRSGNRCLPCSCNSVGSLATQCDNTGRCSCKPGVMGDKCDRCQPGF
HTLTEAGCRPCSCNPSGSTQECDVQTGRCQCKDNVEGFNCDRCKLGYFNLDPQNPQGCTP
CFCFQHSSVCDSAEGYSIDTVSSTFDKDDEQWTAQQRDGSSVSVQWSAGGEEISLISEDY
FPMYFVAPERFLGNQLLSYGQNLTLNFRVDRRDTRLSAEDVVLEGAGLRVAVPLIAQGNA
YPRENMQTFVFRLHDSTDYPWRPTLPQSEFQKLLHNLTSIKIRGTYSERSAGYLDDVMLI
TARRGPGTPARWVEKCTCPQGYMGQHCENCTLGYRRNRPDLGAFSSCDACNCNGHSNTCN
PDTGMCDCQHNTAGLSCERCEDGSYGDSTVGSSSDCKPCPCPGGSTCAVVPKTKEVVCTN
CPTGTTGKRCELCDDGFFGDPLGENRPVRVCRACKCSDNIDPNAVGNCDRETGECLKCIY
NTDGFFCDRCKEGFYGSPLATNPNDKCKSCSCSPYGTVDRQTTCLQVTGQCPCLAHVTNR
DCSACEPGFFNLQSGTGCVRCTCNPIGSTNGQCDISSGQCECQPGVTGLRCERCEVNFFG
FGLSGCKPCDCDPEGSSTTQCKDDGRCECSPGFVGARCDMCEENYFYNRSTLGCQQCPAC
YSLVRDKVNQQRQKLHDLQNLIDNLGSTSEAVSDKAFEDRLKQAEKAVMDLLEEAQTSKD
VDKGLLERLGNLNNTLTTQWNRLQNIRNGVDDTGTQTDKARNRVRDAENLVDRAREELDK
AKDAISKLDIKTPSNTADPNNMTLLAEEARNLADKHKMDADQIEKIAKDANDTSTKALNL
LMKTLDGEGKTNKDIDELNRKYNEAKDLANNLEKQANKVHAEAEEAGDKALKIYANLTSL
PPFNTKSLEGEASKIKKEVSDLDKLIDKTEKEYNDLRDDLRGKETEVRKLLEKGKTEQQT
ADQLLARADAAKALAEEAANKGRSTYQEAQDILGNLRDFDKRVNDNKTAAENAMKRIPEI
NATIAAANEKTKQAEGALGNADADAKEAKSKAEEAEKIASLVQKGSAKTKADAEKAFEDT
RKLDGEVNNMMDQLSAAEAELAKKKAEADQDMMMASMASDNAKEAEDNARKAKSAVRTVL
NTINDLLKSLGNIDKVDLSKLGLIEGSLKQAKDKMANSDLDRKLSELNDVAKSQEEMITD
YDRQIKEIQSDIANLNDIKNTLPNGCFNTPSIERA
NT seq
4788 nt
NT seq
+upstream
nt +downstream
nt
atgcgttggtttattcaagttgtgttttcattgacctgtttggctatatgtagccacagt
gctatggatgaatgcactgatgattcgagtcggcctcagcgatgcatgccagagtttgtc
aacgctgctttcaatgtcactgtggtagctaccaatacttgtggctctcccccagaagaa
tactgtgtacaaaccggcgttacgggggtcaccaagtcgtgccacatctgcgatgccagg
gatcggagacaacatcacagtgctgtgtacctcaccgattacaacaatcaacaggacacc
acctggtggcaaagtcagactatgttagcgggcatccagtatccaaactcaatcaatcta
actcttcatcttggcaaggcttttgacatcacttacgtgcgactcaagttccacaccagc
cgcccagagagcttcgccatctacaagcgcacaagtgaggatggaccatggacgccctac
cagtactacagtggttcctgtgagaagacctaccagaagttcaacagaggcttcatccgc
accggagaggacgaacagcaggccctctgcacagacgagttcagtgacatctcacccttg
accggaggaaacgtggccttctccaccctcgagggccgacccagtgcttacaactttgac
aacagcccagttcttcaggaatgggtgacagccacagatatcaaagtgaccctgaacagg
ctcaacacatttggagatgaagttttcaatgatcccaaggtcctgaagtcctattactac
gctgtctcagactttgcagtgggaggaaggtgcaagtgcaacggccatgcgagtgagtgt
gtgaaaaacaacggtttcgacaagcctgtttgcaactgcaagcacaacacagagggtgat
gactgcaatgtgtgcaagccgttctacaacgaccgtccctggaggcgagctacagccaat
aaccctaacgagtgtctgaagtgcaactgtaatggcaagagtgcagagtgctacttcgac
cctgagctgtaccgtgccaccggccacggaggacactgtcgcaactgtgccgacaacact
gacgggcctaactgcgagcgctgcctggacaatcactacagagaccgatctggcaaccgc
tgcctgccctgcagctgcaactcagtgggctctctggccactcagtgtgacaacacaggg
cgctgcagctgtaaaccaggtgtgatgggggacaagtgtgaccgctgccaacctggcttc
cacaccttgaccgaagcaggctgcagaccctgctcctgtaacccttctggaagcacacag
gagtgtgatgtccagacaggccgttgccagtgcaaggacaacgtggagggcttcaactgt
gacaggtgtaagctgggctacttcaacctggacccccagaacccgcagggttgcactccg
tgcttctgcttccaacactcctctgtgtgtgacagcgctgaaggttacagcatcgacacg
gtttcctccaccttcgacaaagatgatgagcagtggacagcccagcagcgtgacggctcc
agtgtttcagtccagtggtctgctggtggagaggagatttccctcatctctgaggactac
ttccccatgtactttgtggctccagagcggttcctgggcaatcagctgctgagctacggc
cagaacctcaccctgaacttccgggtggacaggagagacacacgcctttcagctgaagat
gtggttctggagggggctggcctcagagtggctgtgcctctcattgctcagggaaatgcc
tatcctagggagaacatgcagacatttgtgttcaggctccacgacagcacagactacccc
tggaggcccaccctccctcagtctgagttccagaagctcctgcacaatctgacatccatc
aagatccgtggcacctacagcgagagaagtgctggctaccttgacgatgtaatgctgatc
acggcgaggagaggtcccgggactccggcccgctgggtagagaagtgtacctgccctcag
ggctacatgggacagcattgtgagaactgcactctgggatacaggaggaacagaccagac
ctgggggccttcagttcctgtgacgcctgcaactgtaacggacacagtaacacgtgcaac
cccgacacagggatgtgtgactgccaacacaacacagctggtctcagttgtgagaggtgt
gaagacggttcctatggagactccactgtggggagttccagcgactgcaagccctgcccc
tgccccggaggatccacttgtgctgtcgttcccaagaccaaggaggttgtctgcaccaac
tgtcccacaggaaccacaggcaagcgctgtgagctgtgtgacgacggtttcttcggagac
cccctgggggagaacaggccggtgagggtgtgtcgggcctgtaagtgtagcgacaacatc
gaccccaacgctgtgggcaactgtgaccgagagaccggggagtgcctcaagtgtatctac
aacacagacggcttcttctgcgaccgctgcaaagagggcttctatggaagccctctggcc
accaaccccaacgacaagtgcaaatcctgctcctgctctccatacggcacagtggacaga
caaaccacctgtctacaggtcacaggccagtgcccgtgtctcgcccacgtcaccaaccgg
gactgcagcgcctgtgagcctggcttcttcaacctgcagagcggaacaggttgcgtacga
tgcacctgcaatcctattgggtccaccaatggtcagtgtgacatcagttccggtcagtgt
gaatgccagcccggcgtcaccggtctgcgctgtgaacggtgcgaggtcaacttctttgga
ttcggattgtctggctgcaaaccgtgtgactgcgacccagagggctcctccacgacccag
tgtaaggacgatggccgctgcgagtgcagcccaggctttgtgggagccaggtgtgacatg
tgtgaggagaactacttctacaaccgctctactctcggctgccagcagtgtccagcttgt
tactctctcgtcagagacaaggtgaaccagcagagacagaagctgcatgacctgcagaat
ttgattgacaatctgggctccacgtcggaggctgtcagtgacaaggcctttgaggaccgt
ctgaagcaggcagagaaagccgtcatggacctgctggaagaggctcagaccagcaaagat
gtagacaaaggcctgctggagcgcctgggaaacctgaacaacacgctgaccactcagtgg
aaccgtctgcagaacatcaggaacggtgtggacgacacgggaacccagaccgacaaggcc
cgcaaccgggtccgagacgctgagaacctggtcgaccgtgcccgcgaggaactggataag
gccaaggacgccatcagcaaactggacatcaaaacaccctcaaacaccgcagatcctaac
aacatgacgcttctggcagaggaggctcgcaatctggccgacaaacataaaatggatgcg
gatcaaatcgagaagatcgccaaggatgccaacgacacatccaccaaggctctcaacctg
ctgatgaagactctagatggcgagggaaagaccaacaaagacattgacgagctcaacagg
aagtacaatgaagcgaaggacctggctaataacctggagaaacaggccaacaaagtgcat
gctgaggcagaggaggcaggcgacaaagccctgaagatctacgctaacctgaccagcctg
ccacccttcaacaccaaatcactggagggcgaagcgagcaagatcaagaaggaggtgtca
gacctggacaagctgattgacaagacagagaaggagtacaacgacctgagggacgacctg
agagggaaggagactgaggtccgcaagctgctggagaagggaaagactgagcagcagact
gcagatcagttgctggctcgtgctgatgctgccaaggcgctggctgaggaggccgccaac
aaggggaggtccacctaccaggaggcccaagacattctgggaaatctgagagattttgac
aagagggtgaacgacaacaagacagcagctgagaatgccatgaagagaatcccagagatc
aatgccactatcgctgcagccaatgagaagaccaagcaggctgagggggcgctaggcaac
gcagacgcagacgcaaaggaggccaagagcaaggcggaggaggctgagaagatagccagc
cttgtgcagaagggttctgctaagaccaaggcggatgcagagaaggcctttgaggacacc
aggaagctggatggagaggtcaataacatgatggaccagctaagtgcagcagaggcagag
ctggccaagaagaaggctgaggccgaccaggacatgatgatggctagcatggcatcagac
aatgcgaaggaagctgaggacaacgctcggaaagccaagagtgcagtcaggaccgttctc
aacaccatcaacgacctgcttaagtcactgggcaacattgacaaggtggacctgagcaag
ctgggcttgattgaggggtcgctgaagcaggccaaagacaagatggcaaacagcgacctg
gaccgcaagctgtcggagctgaacgacgtggccaagagccaggaggagatgatcaccgac
tacgataggcagatcaaggagatccagtctgacatcgccaacctcaacgacatcaagaac
acgttacccaacggctgctttaacaccccatccatagagcgggcttaa
DBGET
integrated database retrieval system
