Oncorhynchus masou masou (cherry salmon): 135514416
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Entry
135514416 CDS
T10723
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM36-like isoform X1
KO
K12013
tripartite motif-containing protein 36 [EC:
2.3.2.27
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135514416
04121 Ubiquitin system [BR:
omm04121
]
135514416
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135514416
Membrane trafficking [BR:
omm04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
135514416
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
135514416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
zf-B_box
zf-RING_UBOX
SPRY
ANCHR-like_BBOX
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_5
zf-RING_2
U-box
Motif
Other DBs
NCBI-GeneID:
135514416
NCBI-ProteinID:
XP_064793965
LinkDB
All DBs
Position
25:complement(47756630..47779848)
Genome browser
AA seq
782 aa
AA seq
DB search
MLGYLFVNYNPCILSTLYIIMSDTADTEENQDMLPSLVEQIVQRITAGEVPIKNIERELI
CPICKELFTHPLILPCQHSICHKCVRELLLLNHEDSFDAGSECSLPGSPGPRSRVPSPSM
ERLDRLARSATLQRRSFGRRGSMSSPGWRRGSVTPRITTFPCPGCQHDVDLGERGMSMLF
RNFTLESIVERYRQAARAAVAIMCNMCKPPQQEATKSCMDCKASYCNECFKFHHPWGTPK
AQHEYVGPTMNFRPKVLMCPEHEMEKVNMYCEVCRRPVCHLCKLGGSHANHKVTTMSSAY
KILKEKLSKAIHYLISKEDQVKTQISHLEVLINETEEKGQLVERRTDENFERLFETLQER
KFEMLRSIEQSRTRRLDQLRSQVDEYQGMLENSGLVGYAQEVLKETDQSCFVQTAKQLHT
RIAKSTESLRTFQPVADPSFDEFVLDTSREETLLKELCFGGVPDPPIIDLSRSRVYNEGL
VCWQLAEDTLATDHQVLEYRKLGVEQDEEEGGSRWRPTVPVYGPSTVVCDLEANSLYSFR
VRSCRNSFYSPYSPEVTFHTPPAPVFGFLFNDKCGFSSERLILSKLRDSVESAAGMAFLL
AAERVQTGSYMGLDYIIGDTGISQGRHYWAFRVEPHSYLVKVGVASDSKLLEWIHNPRDT
SSPRYDHDSGHDSGSEDTCYDLSQPFTLLTVGMGKVFIPKASISSATAGNDHGNRVLPMP
QRIGVYLDYEAGRVYFYDANTMRCLYERQVDCTGTMYPAFGLMGSGKVHLEEFIAAKRLS
YM
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgttaggctatttatttgttaattataatccctgcattttgtcgacattatacatcatc
atgtcagatactgcggataccgaagaaaatcaggatatgttaccgagtttggtcgagcag
atagtccagcggataacagccggagaggtccctatcaagaatattgagcgcgaactaatt
tgtccgatctgcaaggagctgtttacacaccccctcatcttgccctgtcagcacagcatt
tgtcacaagtgtgtccgagagctgctactattgaaccatgaggattctttcgatgcaggc
tcggagtgttccctccctgggagcccagggccccgatccagagtgccctcgccaagcatg
gagaggctggataggcttgcaagatcagccacactgcagagaaggtcgtttgggaggaga
ggctctatgtcctcaccaggatggaggcgtggctctgtgaccccccgcatcaccactttc
ccatgcccgggttgccaacacgacgtggacctgggcgagcggggcatgagcatgctcttc
cggaacttcaccctggagagcatcgtggagcgctaccggcaggcggcccgcgctgctgtt
gcgatcatgtgcaacatgtgcaagccgccccagcaggaggctaccaagagctgcatggat
tgcaaggccagttactgcaatgagtgcttcaagttccaccacccctggggcacccccaaa
gcccagcacgaatacgtgggtcccaccatgaactttaggcccaaggtgctgatgtgtccg
gagcatgagatggagaaggtcaacatgtactgcgaggtgtgccggcgtccagtctgtcac
ctgtgcaagctgggaggctcccacgccaaccacaaagtcacaaccatgagcagcgcctac
aagatcctcaaggagaagctatcaaaggctatccattacttaatcagcaaagaggaccaa
gtgaagactcagatttcccacctggaggtgttgatcaatgaaaccgaggagaaaggccag
ttggtggagcgtcggaccgacgagaactttgagcgactgttcgagaccctccaggagagg
aagtttgagatgctgcggtccatcgagcagtcgaggacgcggcgtctggaccagcttcgg
agccaggtggacgagtaccagggcatgttggagaacagcggcctggtgggttatgcccag
gaggttctcaaggagacggaccagtcctgctttgttcagactgccaagcagctgcacacc
aggatcgcgaaatccaccgagtctctgaggacattccagcctgtggccgacccctccttt
gatgagtttgtgctggacacttccagagaggagaccctgctgaaggagctttgttttggt
ggagtccctgaccctcccatcatcgatctgtcccgcagtcgcgtctacaacgaaggcctg
gtgtgctggcagttggctgaggataccctggctacagaccaccaggtgcttgagtacagg
aagctgggtgttgagcaggacgaggaggagggcggcagccgctggcgccccacagtcccg
gtgtacggccccagcacagtggtgtgcgacctggaggccaacagcctctactcgttcaga
gtacgcagctgccgcaactccttctacagcccctacagcccagaagtcaccttccacaca
ccacctgctccagtgtttggcttcctgttcaatgacaagtgtggcttcagctcggagcgt
ctgatattgagtaagctgcgtgactcggtggagagtgcggccggcatggccttcctgctg
gctgctgagcgcgtgcagacaggcagctacatgggcctggactacatcatcggtgacaca
ggcatctctcagggcagacactactgggccttccgcgtggagccccactcctacttagtc
aaggtgggcgtggcctctgattccaagctgctggagtggatccacaacccccgggacact
agtagccctaggtacgaccacgacagtgggcacgacagtggcagcgaggacacgtgctac
gacctgtcccagccctttaccctgctcactgtgggcatgggaaaagtgttcatccccaaa
gcatctatctcctccgccaccgccggcaatgaccacggcaaccgggtgctgcccatgccc
cagcgcattggcgtgtacctggactacgaggcgggccgtgtctacttctacgatgcaaac
accatgagatgcctttacgagcggcaggtggactgcaccggtaccatgtatcccgcgttt
ggcctcatgggtagtggcaaggtccacctagaggagttcatcgcagcaaagcgactgtcg
tatatgtga
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integrated database retrieval system
