Oncorhynchus masou masou (cherry salmon): 135514422
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Entry
135514422 CDS
T10723
Name
(RefSeq) semaphorin-6A-like isoform X1
KO
K06842
semaphorin 6
Organism
omm Oncorhynchus masou masou (cherry salmon)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
135514422
NCBI-ProteinID:
XP_064793977
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Position
25:complement(47990645..48085869)
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AA seq
1012 aa
AA seq
DB search
MRSEALLLYFMLLKIARAGFPEDSEPISISHGNYTKQYPAFFGHKPGRNNTQRHKLDIQL
IIIMNRTLYIAARDHIYTLDTDTANSEEIFFNKKLTWKSRQADVDTCRMKGKHKDECHNF
IKVLLQQNDDTLFVCGTNAFNPSCRTYKMDTMEHLGEEISGMARCPYDAKHSNIALFADG
KLYSATVTDFLAIDAVIYRSLGDSPTLRTVKHDSKCLKEPYFVQAVNYGDFIYFFYREIA
MEYNTMGKVVFPRVARVCKNDRGGSQRVLEKQWTSFLKTRLNCSIPGDSHFYFNILQAVT
DVIHINGRDIVMATFSTPYNSIPGSAVCAYDMAEVANAFMGRFKEQKSPDSTWTPVPEDK
VPKPRPGCCAGTPSLEKYKVSNEFPDDTLNFIKQHPLMDEAVPSIANRPWFLKTMVRYRL
TRISVDNAAGPYRNHTVVFLGSEKGIILKFLAKMNSGLLNDSLFLEELNVYNPEKCSIDG
VDDKRIVSMQIDNQGHSLFVAFTSCVVKVPLSRCERHGKCKKSCIASRDPYCGWVSEGAC
RQVVLDPKSAFEQDVEHGNTDGLGDCQNTFVALNDVQSSPHGHERARHDHPTLPFPTTAH
PPAGGPLGRGGMVEQADTPMPSDNRDPYMAVPSQTQQDANGVIRESYQKGRGQLVPVTLL
AIAVIMAFAMGAIFSGILVYCVCDHRRRDIELSGRKDKDHDRRGSMNSVTKLTGLFETGA
KDSRPEAILTPLMHNGRITNGKILIKADQHHLDLAGMPTPESTPMQPRRKPSRGSREWER
NQNLINACTKDLQTMGSPVIPTDLPLRASPGHIPSVVVLPLPQHQHQQPYQHEYVEQPHR
SDLSQMSLGDQGATLEYKSLKSPCHNLNLVESDGLPPRVPQREASLTIPPAVPQMGKRLE
VHSSVYGHEYKRGYPMSAQKGSALKKHNTNSSNSSHLSRHQSFNHVESPPPAPQRVDSMH
MNSQAMSHSRQPSMSSYGSLPRTGVKHLKPDVPPKPSLVSLSTKVNSNDSCT
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgaggtctgaggccttgttgctgtatttcatgctactgaagattgcaagggctggcttc
ccagaagactctgagccaatcagtatttcacatggcaactatacaaagcagtatccggct
ttctttggacacaaacctggaagaaacaatacacaacggcacaaactggatatccagctc
atcataataatgaaccgaacgttgtatatcgccgccagggatcacatatacacgctggat
acagacaccgccaactccgaggagatctttttcaacaagaaactgacatggaagtccaga
caggcagatgtggacacctgccgaatgaaggggaagcacaaggatgaatgtcacaatttc
atcaaggtcctcctgcagcaaaacgatgacaccttgtttgtgtgcggaacaaatgctttc
aacccctcctgtcgaacttacaagatggacaccatggaacatctaggggaggagatcagt
gggatggcacggtgcccatacgatgccaaacactctaacatcgccctgtttgcggatgga
aagctctactccgcaacagtaacagatttcctagcgattgatgctgtcatttatcgtagc
cttggcgatagcccaactttgcggactgtcaaacatgactccaagtgtctcaaagagccg
tattttgtacaggcagttaactacggtgacttcatctacttcttctatcgagaaattgcc
atggagtacaacacaatgggaaaggtggtgttcccccgtgtggccagggtgtgtaagaac
gaccggggcggctcccagagagttctggagaaacagtggacgtccttcctcaagacccgt
ctcaactgctccatcccaggggactcccacttctacttcaacattctgcaggccgtcacc
gacgtcatccacatcaacggacgcgacattgtcatggcaaccttctccacaccttacaac
agcattcctgggtcggccgtctgcgcctatgacatggctgaggtggccaatgcgttcatg
ggacgtttcaaagagcagaagtcccctgattccacctggacacctgttcctgaggataaa
gttccaaaaccaaggcccgggtgctgtgctggcacgccgtccttagagaagtacaaggtg
tccaacgagttccctgacgacactctgaacttcatcaagcagcaccctctcatggatgaa
gctgtgccctctatcgctaacaggccctggtttctcaagaccatggtgcgataccggctc
acccggatctccgtggacaacgctgcgggaccctatcggaatcacactgtcgttttcctg
ggctcggagaaggggatcattctgaaattcctggccaagatgaacagcggtttgctgaat
gacagtctctttctggaggagctcaacgtgtataacccggagaagtgcagcatcgatggt
gtggacgacaaacgtattgtcagcatgcagatcgacaaccagggccactctctgtttgtg
gccttcacctcctgtgtggtcaaggtgccgctctctcgctgtgagaggcatggcaaatgc
aagaaatcatgtattgcctccagggatccctactgcggctgggtgtccgaaggagcatgc
agacaggtggtgctcgacccaaaatcggccttcgagcaggacgtggagcatggcaacaca
gatggactgggagactgccaaaatacgtttgtggccctcaacgatgttcagtccagtcct
catggtcatgaaagggctcgccatgaccatcccaccctcccattccccaccacggcccat
ccccctgcaggaggaccactgggtcggggcggcatggtggagcaggcggacacccccatg
ccctcagataacagggacccctatatggcagtaccctctcagacccagcaggatgccaat
ggagttatccgtgagagttaccagaaggggcgtggccagctggtccctgtcacactgctg
gccattgctgtcatcatggctttcgccatgggtgccatcttctctggtatcctcgtctac
tgtgtgtgtgaccaccggcgacgagacattgagctgtctgggcgtaaggacaaagaccac
gacaggaggggctccatgaacagcgtgaccaagttgacaggcctgtttgagaccggggcc
aaggacagtcgccctgaggccatcctcaccccgctcatgcacaatggccgcatcaccaat
ggtaagattctgatcaaagccgaccagcaccacctggacctggctggcatgcccacccca
gagtccacccccatgcagccccgacgcaagcccagccggggaagccgcgagtgggagagg
aaccagaatctgatcaatgcctgcaccaaagacctgcaaaccatgggctctccagtcatc
cccactgacctgcccctgagggcctctccaggccacatccccagtgtggtagtgcttccc
ctgccacagcaccagcatcagcagccctaccagcatgagtatgtagagcagccccaccgc
agcgacctcagccagatgagcctgggtgaccagggtgccacactggagtacaagtcccta
aagagcccctgccacaacctcaacctggtggagagcgacggactgccgccccgagtgccc
caaagggaggcctccctcaccatcccccctgccgttccccagatgggcaagcggctcgag
gtgcactcctccgtctatggccatgagtacaagcggggctacccgatgagtgcccagaaa
ggctctgccctcaaaaagcacaacaccaactcgtccaactcctctcacctgtccagacac
caaagttttaaccacgtggagtcgccgccccccgccccacagagggtggactccatgcac
atgaattcccaggcgatgtcccactcccgacagcccagcatgagctcttatggttcattg
ccccggaccggggtcaaacacctcaagcctgacgtaccgcccaaaccctctttagtgtcc
ctctcaacgaaagtcaattccaatgactcctgcacatag
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