Oncorhynchus masou masou (cherry salmon): 135514435
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Entry
135514435 CDS
T10723
Symbol
vcpip1
Name
(RefSeq) deubiquitinating protein VCPIP1
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
omm01002
]
135514435 (vcpip1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135514435 (vcpip1)
Enzymes [BR:
omm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
135514435 (vcpip1)
Peptidases and inhibitors [BR:
omm01002
]
Cysteine peptidases
Family C64
135514435 (vcpip1)
Ubiquitin system [BR:
omm04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
135514435 (vcpip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
Motif
Other DBs
NCBI-GeneID:
135514435
NCBI-ProteinID:
XP_064794010
LinkDB
All DBs
Position
3:complement(31104435..31117883)
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AA seq
1187 aa
AA seq
DB search
MSLLQGSKKKDKRILSGTCPDPKCQARLFFPAYGSISIECTECGQRHEQNNLLNVEEVTD
PDVVLHNLLRNALLGVTGAPKKGTELVKVMGLSNYHCKLLSPILTRYGMDKQTGKAKLLR
EMNQGEMFDCSLLGDRAFLIEQEHVSTVGYGKDRSGSLIYLHDTLEEMKKANGNKECLIP
VHVDGDGHCLVHAVSRALVGRELFWHALRENLKQHFKQNLDRYKALFQDFIDAAEWEDII
NECDPLFIPPEGVPLGLRNIHIFGLANVLHRPIILLDSLSGMRSSGDYSASFLPGLVPEE
QCKGKDGKFNKPICIAWSSSGRNHYIPLVGIKNTLLPKLPPRLLPKAWGVPQELIKKYIK
LEQDGSCVIGGDRSLQDKYVMRLVNAMEEIFMEKHGIHPSLVADVHQYVYRRTGVIGVQP
EEVTEAARKSVMENRLHRCLICNALSELHVLPEWLAPGGKLYNLAKSTHGKLRPDKNYSF
PLNKVVCCYDPERDILIPDYKLSSLNTCNWCHGTSVRHIHGNGSVVYLDGDRTNTRSQGG
KCGCGFKHYWEGKEYDNLPEAFPITLEWGGRVVRETVYWFQYEVHVDLNSNVYDVAMKLV
TKHFPGEFGSELLVQKVVNTILHHTAKKNPDEYNPVSIDGAHAQRLTDVVETQQAVDTQP
PTKIILTGQKSKTIHKEELTVSKAERSLQQSISEQALVTQKRRTDRLKQEQKGQGRPPSP
SAAQEHSSSSPATPTKSSSSPTSSKEKKIRVTTSDGRQAMLTLQAQTTFSELQRSIANEF
TMPPAQQCIRHGFPPKELFPPKDGAENEPVALQHGDRVTVEILRGPEDRKASAPSASSSY
STLHSLLSVKSDDPVTSSRMNTSRELQDNIDLEMSSLCLLATLMGEDVWSYAKKLPHLFH
QGGVFYNIVKKDMGLMDGKHCTLPHLTGKTFVYNAAEERLELCVDAAGHFPVGPDVEDLV
KEALVQLRSEAASRSREGSPSHSLLRLGSGGVVRKKEQLQSVNAFQGKGHSLGSAPGGSP
PEHKPITRQHSSGVDLSASASKGPDLSDISEEATKELVRMAPGFVTMKDSRHLDPSMIEE
QRKKLQEMVSSIQASMDRHLREQSNAGAGIGGPAERTSGAKMSASQSAPGAAVKEASSMD
VSTAGAHGTSVEAGNKPDGKDAGSEELEEMDSQDAEHTNALEPMDHS
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgctacagggctccaagaaaaaggacaagcgtattttgtccggtacctgccca
gacccgaaatgccaggcgaggctattcttccctgcttacggttcgattagcattgaatgc
acagagtgtggccaacgccacgaacagaataatcttttaaatgtggaagaagtaactgat
ccagacgttgtgcttcacaatttgttaagaaatgccttactgggtgtcactggtgcaccg
aaaaagggaacagagctggtgaaagtgatggggctttccaactaccattgcaaactcctt
tctcctattctcacaaggtatggaatggataagcagacgggaaaagcgaaactgctgcgg
gaaatgaatcaaggagaaatgttcgactgttcacttctaggagacagggcgtttctaatt
gaacaggagcatgtatctacggttggctatggcaaggacagatccgggagcctgatatac
cttcacgacactttggaggagatgaagaaagcaaacggcaacaaagaatgcctcattcct
gttcatgtggatggagatggacattgtcttgttcatgctgtgtccagggccctggtaggc
agagaactgttctggcatgccttgagagagaatttgaaacaacatttcaaacaaaacttg
gatcgctacaaggcactctttcaggattttattgatgcagccgaatgggaggacatcatc
aacgaatgtgaccccctgtttatcccaccggagggtgtgccactgggacttcggaacatt
cacatattcggcttggccaatgtgctgcaccgccccataatcttgttagattcactgagt
ggaatgaggagctctggggattactctgcaagttttctccctgggcttgtgccggaagag
cagtgcaaaggaaaagacgggaagtttaacaagcctatatgcatcgcctggagtagctca
gggcgtaaccactacatccccctcgtcgggataaagaacactcttctccccaagctgcca
ccgaggcttctccccaaggcatggggagtgccacaggagctcatcaagaagtatataaag
ctggaacaagatgggagctgtgtcatcgggggagacaggagcttacaagacaagtatgtg
atgagactggtcaatgccatggaggagatcttcatggagaagcatggaatccacccctcc
ctggtggcagacgtgcatcagtacgtttacagacggaccggtgtgatcggcgtccaaccc
gaagaggtgacggaggctgccaggaaatcagtcatggaaaaccggctacatcgctgtctg
atctgcaatgcactctctgagctccatgttctacctgagtggctggctccaggtggtaag
ctttacaacctggctaaatccacccacgggaagctcagacctgacaagaactacagcttc
ccgctgaacaaggttgtctgctgttacgaccctgagagggacatcctcattcctgactac
aagctgagctctttgaacacatgcaactggtgccacggcacctccgtgcgccacatccat
ggcaacggctctgtggtgtatctggatggagacagaaccaacacccgttcccaggggggc
aaatgtggctgcggctttaagcactactgggagggaaaggaatacgacaatctgccagag
gctttccccatcactctggagtggggtgggcgggtcgtgcgggagactgtgtactggttc
cagtatgaggttcatgtggacctgaacagcaacgtgtatgatgtcgccatgaaactggtc
accaagcatttccctggggagtttggcagtgagctcctagtgcagaaagtggtgaacacc
attttacatcacactgccaagaagaacccagacgagtataacccagtctccattgacggg
gcgcatgctcagagactcacagacgtggtggaaactcagcaggctgttgacacacagcca
ccgactaagatcatactaactgggcagaaatcaaagaccattcacaaagaggagcttaca
gtgagtaaggcagagcggagccttcagcagagcatcagcgagcaggccctagtgacccag
aagaggaggacggatcgactgaagcaggagcagaagggacagggcaggccaccctcccca
agtgctgctcaggaacattcctcctcctccccagccacacccaccaaatcctcctcctcc
cccacttccagcaaggagaagaagatccgtgtcaccactagcgatgggcggcaggccatg
ctcactctacaagctcagaccaccttctctgagctccagaggagcattgctaatgagttc
accatgcctccagctcagcaatgtatccgacatggattcccacccaaagaacttttccct
cccaaggatggagcagagaatgaaccggtggctctccaacacggcgacagggtgactgtg
gagatcctgagaggtccagaggaccgcaaggcatccgccccaagtgcttccagttcctat
tcaaccctgcattccctcctctctgtgaagagtgatgatccagtgacttccagcagaatg
aatactagcagagagctgcaggacaacattgaccttgagatgtcctccctctgtctccta
gcaaccttaatgggagaagatgtctggtcatatgccaaaaaactgcctcacttattccac
caaggtggagttttctacaacattgtgaagaaagatatgggcctgatggatggcaagcac
tgcaccctcccacacctgactggaaagacgtttgtttacaacgcagcagaggagcgtctg
gagctgtgtgtggatgcagcgggacactttcccgtgggccctgacgtggaggacctcgtc
aaggaggccctggtgcagctccgctctgaagctgcctccaggagtcgcgagggaagcccc
tctcacagcctgctgaggctcgggagtggaggtgtggtgcgcaagaaggagcagctccaa
agtgtcaacgccttccagggtaagggccactccctgggcagcgccccaggcggctctccc
cctgaacacaagcccatcaccaggcagcacagcagcggggtggacctgagcgccagcgcc
tccaagggacctgacctgtctgacatctcagaggaggcgaccaaggagttggtgcgcatg
gctcccggttttgtcaccatgaaagacagccgacacctggaccctagtatgatcgaagaa
cagaggaaaaaactacaggagatggtctcatccatccaggcctccatggacaggcacctg
agggagcagagcaatgcaggggcaggcattgggggccctgcagagaggacaagtggggct
aagatgagtgcttcccaatctgccccaggggcagccgtaaaggaggcctcttctatggac
gtatctactgctggtgctcatggcacatcagtggaggcagggaacaagcctgatggaaag
gatgcagggtcagaggagctggaggaaatggatagccaggatgcagagcataccaacgcc
ctggagccaatggatcattcctga
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integrated database retrieval system
