Oncorhynchus masou masou (cherry salmon): 135514636
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Entry
135514636 CDS
T10723
Name
(RefSeq) E3 ubiquitin-protein ligase rififylin-like isoform X1
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135514636
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
135514636
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
135514636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF34L-like_3rd
SAP_RNF34_RFFL
FYVE_CARP1-2
zf-C3HC4_3
ARMET_C
zf-RING_5
FYVE_2
Prok-RING_4
zf-C3HC4_2
FYVE
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-GeneID:
135514636
NCBI-ProteinID:
XP_064794152
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All DBs
Position
26:1953952..1972855
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AA seq
360 aa
AA seq
DB search
MWASCCNWLCLDTATLEESNSRTRHQAYTNSGYSNYPSPPLPDHTCKACGSRFVTLARKH
VCMDCKNNYCSRCSAQLEPRPRLCHTCQRFHGTLFDRTELMKVKVKDLRDYLHLHKVSTQ
MCREKEELVELVLGQQTQSLSGPIVNPLTQTATQHPTPPPAHPTTTTPSTHPESTSTDHA
HSQPPPTREDSQTVSVLVSSGLEEPLDTEGDTELQGEQELQSSDTEEVLVPGRRASLSDL
AVAEDIEALSVRQLKEILARNFVNYKGCCEKWELMERVTRLYHDQKDLQNHLVSSTNDST
DPSGTPGQEENLCKICMDSPIDCVLLECGHMVTCTKCGKRMNECPICRQYVVRAVHVFRS
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcatcctgctgtaactggttatgtttggacactgctacgttggaggagagcaac
agccgcacgcgtcaccaggcctatactaactcaggctatagcaactacccgtcgccccca
ctcccggaccacacgtgcaaagcctgcggaagccgcttcgtcaccctagccagaaagcat
gtctgcatggactgcaagaataactactgcagcagatgttcggcccagcttgagccccgt
ccacgcctttgtcacacctgccagcggttccacggcacacttttcgatcgcaccgagctg
atgaaggtcaaggtgaaggacctgcgcgactacctccacctgcacaaggtctcaacgcag
atgtgccgtgagaaagaggaactggtggagctggtcctgggacagcagacacagtcactc
tctggcccaatcgtaaaccctctgacccaaaccgccacccagcacccaactcctcctcca
gcacaccccaccaccaccacaccctctacacaccccgaatccacctccacagaccatgcc
cattcacagccgccacccactcgggaggacagtcagaccgtgtctgtgttggtgtcctcg
ggtcttgaggagccactggacactgagggagatacagagctgcagggagagcaggagctg
cagtcctcagacacagaggaggtgctggtgccaggccgcagggcgtcgctgtccgacctg
gccgtggcagaggacatcgaggccctcagcgtccggcagctcaaggagatcctggcacgt
aactttgtcaactacaagggctgctgcgaaaagtgggagctaatggagagggtcacccgt
ctctaccacgaccagaaggaccttcagaatcatctggtttcaagtacaaacgacagcaca
gaccccagcggtacccctggccaggaggagaacctgtgtaagatctgcatggactctccc
attgactgtgtcctgctggagtgtggccacatggtcacctgcaccaagtgtggcaagcga
atgaacgagtgtcccatctgcaggcagtatgtggtgcgggccgttcatgtctttagatcc
tga
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