Oncorhynchus masou masou (cherry salmon): 135514655
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Entry
135514655 CDS
T10723
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03440
Homologous recombination
omm03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
135514655 (brca2)
03460 Fanconi anemia pathway
135514655 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135514655 (brca2)
03036 Chromosome and associated proteins [BR:
omm03036
]
135514655 (brca2)
03400 DNA repair and recombination proteins [BR:
omm03400
]
135514655 (brca2)
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
135514655 (brca2)
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
135514655 (brca2)
DNA repair and recombination proteins [BR:
omm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
135514655 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
135514655 (brca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA-2_OB3
BRCA2
BRCA-2_OB1
BRCA2DBD_OB2
Tower
BRCA2_TR2
Motif
Other DBs
NCBI-GeneID:
135514655
NCBI-ProteinID:
XP_064794206
LinkDB
All DBs
Position
26:complement(3575862..3609254)
Genome browser
AA seq
2868 aa
AA seq
DB search
MDIRRNMFDAFKDQIWEELGPLNPNWFEEITAKASSRDWGDTEKDNPSAAISCGQDGSFK
TPLGKCPLDGDMFSTPKIFRQRRPQSPETLIEDAVFFPDQGTSATEKMDTSPCLFGKSID
RGTPSKSYRTRLHGDSFGLLDTPKHSTVFLFQQAHSAKRISESLGAQLDPDMSWTSSLNT
PVMSPTIILTKSEEHSPMCPVRIATEEQVMFVRKLFPSAKESRSTMLSPEQNDRPLCQHN
GLDSHLPGVIDISPGFQDTLPGDSGSHWKRTLPDAIEDGEICSTMAGVLDGAEDVLSIFF
SNKSLALQRVKTNERIKRKQSGATKEHGPTSTTEHDKVSSERAGEYQHTRETSEPLESRT
DMKSGDLATSQWTPINVPDFSGYDMDSFHHEGSSSTKHIIPQGGKSETFRDFTGSQQPDR
GSSKHTVQVESALSRRTLPCTSQPEGYQLTESVVESSLEHTFPRKTRTFVYCVQNPLLSV
QEKYVTQMLPASPGTAPRGENQNMKQSKTIPDEAEFNNLNKTALDGKKPLVQKSATEENI
VSQAPTKDPDLDMSQLCRVFAQDFSQIIDYSQPCSKRADAIKNGFSASACLSAMRLRNRK
LLNRLEWGQKPEHLNSGISEEMHIPGSQFSNSANTSRMKSTVCDSGFPPSTLSDVTQTES
SNVHPSSEKSYGNQSSRGFKTGNNWIISLPPEAIKKAKSSLDDLIEENMTVVTAASEVKP
VLSCVTGSRLSTEVKFISPLNIAKRSKQTSVKLNGQVHVPTHQSINVSVSSHPGSGFKMA
SNKKIHFFSANLEKDEDLFKEIEDEIPAVNIPEISLPEDGNMSCGLELVDGSHLPPLLYT
HQRSVNSQGPLTASQSADVSELCSLLEAADSQFEFTQFKPAKLNFYVPDGSPPRQSEKEL
DPDFLTGIDFDDSFNSDVEKQSVKMVTPDKKTTISHCKEICQVTTTKIKSSGASSSNSTE
KSKEHVIHRRVLYIPSYSSENIAERSFGLLTKSTNKNHLLDMDTNTSGMECERKNLPKLD
VGFKTAGGNAMIVSEKCLSKARALFADFEGKNCAPKCAVKNTEEVEISPVQYRGEVDTNV
DSNVTHFHGPEKKVDLKEPHDEYIDKMKVDFTHSHTHVDCGFQTASGKGVTISAKALQKP
NAVFKDCDAMESSGCASEKLSKTSVVSETGSNNFERNNCGFSTARGKRLDVSAKSLLTLL
NDCDELENSKPGKIPSLNARIPSQNIQQKSDCDFKKPSIKAASISARIPFTAKTPFDSGM
SHDVLGAKSKMLEPENSQTHAKDPLKNGCGFSTASGKRVSVSEGALLKAQALLSECNVDG
EELSKSKKKIRVDLHNPTQKHSGFKMAGVKEVTVSPKAHKQAQALFNNCDFNMDSLICAE
AKQENIDVKSADGLMSNPGKSYCAFMTAGGENVHVSEKGILKAKSILNENLDNCTDSNAI
EEAWFSDGRFLLLTEDGTGVKGARNKSNYSDLNGDEKCCDFSTAGGKTVHMSDGALQKAK
SILNECDVIGNPQPENGHNVHLEKIPTKETHEISHVSAVSGKGVFISEKALQHVKSVYVL
GETGNVKHSVGSNPVGSHFGFSTASGKGLSVSEKALQEACDDTLARDTDPHKRAEENRPL
NVPSPHINVQRVPVKAVRLEDREVIQTIVGMECKSSSVECQEESSLLNFESLGFSGCSVT
QRRYFAQEAMDCTKALLEDEDLTDHCPGTPIQANPMSCKGGFEMRSGIGKRSAEDLGMTD
QPPLKRKLLTKFDRTVDCIRQSKLTPAKSSSDGIFKDRRVFKYNVPLQPNVTRPYRANQR
CVDTRLNKPEPQKTTSDPTAEDRKPVSSKTAVFVPPFRKNVKLEPQGSSGLQDKTRAPGV
FVSPFRKNNRLTREGSFKPLEDNHSPFNSEMPTKTTSVPLPEYNSITDTGSDNAKDSIKE
QDPQNIDKTDRGDDCGHCLPVTLGGEDATAEESIAGQLAPDATGTLLDVVYDAECLQLAR
DMQDMRIRKKKRQTIRPLPGSLYLAKTSGVARLTLREAVGGWHPVQHTHKQLYGYGVHRH
VWDISSESAEAFRFVCRHFFRREAFVEGCIQLADGGWLIPRNDGTAGKHEFHRALCDSPG
VDPKLISEDWVFNHYRWVVWKRACMERAFPEVMGSLCLTPEQVLLQLKYRYDLEVDNSKR
SALRKIMERDDTAVKTLVLCVCGVVTKGHNPTRQSWSETKTKTPPGSAAGSKAKSSPVGL
IWLTDGWYAIKAQLDVPLTAMLHRGRLAIGGKVLVHGAELVGSQDACSPLEAPDSLMLKI
GANSTRAARWYTRLGFYSNPSPFLLPLSSLYSNGGPVGCVDIVVLRSYPTQWMEKKLDGG
FVFRAGRAEEREARRHGNAKHRAMEILFAKIQAQFEKEEDGAASPFHSVTKPFPPTEHHP
TVCGKPRGRRRTLRGRDIETLLDGEELYDAVENDPVYLEGRLSEQQREALNSYRRCVGER
RQEALQERFRQALESTQEGEGRSCHNRDVTPIWKLSVADYRAKPGSNAVYLLNIWRPSMD
LQSLLKEGCRYRAYQLSTSEGKKRAGNTSIQLTATKRTQFQNLQASAGWLSEIFQAREAV
GFRVLLNRDLKPLCGEVDLVGYVISITDRQGHSPVVYLVDGWLDFVKVRCCSSLVQQGLE
EVVKPLALVALSNLQLRAHPSSPTPIHSAIPGLYAGDLVSFSTNPKEPHLQEAAAQLRTL
VQGQEHFFRTAEERLSKLVQVSVQCLPPLPWKADVKPDSRTTMTSQQSVRSVGPFTPLNS
VVPPPPAFFSGGDNKDPKSLKRKRGLDYLCRIPSPPPLCPLGTMTSPSPCVNKTFNTPRR
AETHRILKTPLAPTPQHVHLPLEDEWVEDEELVMIDTQALHDGIERDT
NT seq
8607 nt
NT seq
+upstream
nt +downstream
nt
atggacataaggagaaacatgtttgatgctttcaaggatcaaatatgggaagagttggga
cctctgaacccaaactggtttgaagagatcactgctaaagcttccagtcgggattggggt
gatacagagaaagataatcccagtgctgcaatatcttgtggacaagatggcagtttcaaa
acaccattggggaaatgtccccttgatggtgatatgttctctaccccgaagattttcagg
cagagaagaccacagtctcctgagacattgatagaagatgcagtgttttttcctgatcaa
ggaacctctgcaactgaaaaaatggacacaagcccatgcttatttggaaaatcaatagac
agagggacccccagtaaatcctatagaacaaggctgcatggagacagttttgggctgctt
gacacaccaaaacactctacggtctttttatttcagcaggcacactctgccaaacgtata
tctgaaagtcttggtgcacagttagaccctgatatgtcctggaccagttctctcaataca
cctgtcatgtcacccaccataattttgactaaaagtgaggagcatagtcctatgtgccca
gtaagaattgctaccgaagagcaggttatgtttgtgcgaaagcttttcccttcggccaag
gagtctagaagcacaatgctgtcaccagaacagaatgatagacctctctgtcaacacaat
ggactggattcccacttgcctggtgtgattgacatctcccctggctttcaagacacgtta
cctggtgacagtggcagccattggaaacggactttaccagatgctattgaggacggagaa
atctgcagcacaatggccggtgtcctagatggagccgaggatgtcctctccatattcttc
agcaacaaaagtttagctttacaacgggtgaagaccaacgagagaatcaaaaggaagcaa
agtggcgcaactaaggaacacggacctacttctacaacggaacatgacaaagtatccagt
gagagagcaggagaataccaacacaccagggaaacctctgagcctcttgagtccaggact
gacatgaagtctggggatttggcgacttctcagtggactccaataaatgtacctgacttt
tcaggctatgatatggattcatttcaccatgaggggtcttcctctactaaacacataatt
ccacaaggtggcaaaagtgaaacattccgtgacttcactggaagccagcagccggatcgt
ggttcctctaagcacactgtccaggtggagtctgctctttccagaagaacattaccatgc
accagccagccagagggatatcaattgacagagtctgtagtcgaaagctctctagaacac
acctttcccaggaaaacaagaacatttgtttactgtgtccaaaatccacttctgtcagtg
caagagaaatatgttactcagatgttacctgcatcacctggaactgctcccagaggtgaa
aatcagaacatgaaacaaagtaaaaccataccagatgaagctgagtttaataatcttaac
aaaactgccttggatgggaaaaagccgctagttcagaaaagtgcaactgaagaaaatatt
gtttcacaagcaccaaccaaagaccctgatcttgatatgtcacagctttgcagggtattt
gcgcaagattttagccaaataattgactacagtcaaccatgcagcaaaagagcagatgct
attaagaatggcttctctgcatcagcttgtctctcagcaatgagactaaggaacagaaaa
ctgttgaatagactagaatggggtcagaaacctgaacatcttaactctggcatcagcgag
gaaatgcatattcctggttctcagtttagcaactctgcaaacacatctagaatgaagagt
acagtgtgtgatagcggcttccccccctccaccctttcggatgtcacacaaacagaatca
tccaacgttcaccctagctctgaaaaaagttatggaaatcaatcatctagagggtttaaa
acgggtaataactggattatctctttgcctccagaagcaataaagaaagcaaaatcatca
ttagatgacttaattgaggaaaatatgactgttgttactgctgccagtgaagtgaaacct
gtgttgtcatgtgtgacaggaagccgactgtccacagaagtgaagttcattagtccactc
aacattgccaaaaggtcaaagcaaactagcgtaaaattgaatggtcaagttcatgttccg
acccatcagagcatcaatgtttcggtttcctcacaccctgggtctggtttcaaaatggcc
tccaataagaagatacattttttttcagcaaatctggagaaagacgaagatctgtttaag
gagattgaggatgaaatacctgcagtcaatattcctgagataagccttcctgaggacggt
aacatgtcatgtggattggagcttgttgatggatctcatttaccacctctactctataca
caccagaggtctgttaatagccaaggtccattgacagcctcacagagcgctgatgtttca
gaattgtgcagtctcttagaagctgcagacagccaatttgagtttacacagtttaaacca
gcaaagctgaacttctatgttccagatggtagcccccctcgtcaatctgagaaagaattg
gatcccgactttctcacaggcatagatttcgatgacagtttcaactctgatgttgagaag
caatctgtgaagatggtcacccctgacaaaaagacaactatttctcattgcaaggaaatt
tgccaagtaacaaccaccaaaattaaatctagtggggcatcatccagcaattcaacagag
aaatccaaagaacatgttatccacagaagagtactttacattcccagttatagctctgaa
aacatagctgagcgttcctttggtttgttgacaaaatccacaaacaagaaccatctactc
gatatggatacgaacaccagtggaatggagtgtgaacgcaaaaatctccccaagttggat
gtgggttttaaaactgctggcggaaatgctatgatagtttcagagaagtgtctgagcaaa
gcaagggccttgtttgcagattttgagggaaaaaactgtgcacccaagtgtgcagtaaaa
aatacggaagaagttgaaatttcacctgttcaatatagaggcgaagttgacacaaatgtt
gattcaaatgtgacacattttcatggccctgaaaagaaagtagatctgaaggaaccacat
gatgaatacattgacaagatgaaagtggactttacacattctcacacacatgtagattgt
ggtttccagacagccagtggtaaaggagtgaccatctcggcaaaggcccttcaaaaaccc
aatgcagtcttcaaagactgtgacgctatggaaagttcaggttgtgcatcagaaaagctg
agcaaaacaagtgttgtatcagagactggcagtaataattttgagagaaacaattgtggc
ttcagcactgctcgagggaagagacttgatgtttctgctaaatctctactgactctcctg
aatgactgtgatgaattggagaattctaagccagggaaaatccccagcttgaatgcaagg
ataccaagtcagaatattcagcagaaaagtgactgtgattttaagaaacccagtattaaa
gcagcctccatatcagcaaggatcccttttacagcaaaaactccatttgatagtggcatg
tcacatgatgttctaggggcaaagagcaaaatgcttgaaccagaaaattctcaaacccat
gctaaagatcctttgaaaaatggatgtgggttcagcactgccagtggtaaaagagtgtct
gtgtcagaaggggcgctattgaaagcacaggctcttttgagtgaatgtaatgtcgatgga
gaggaactttctaaatcaaagaaaaagatcagagtagatcttcataacccaacacagaag
cacagtggatttaagatggctggtgtcaaagaagttaccgtatcacctaaggcccataag
caagcacaggctcttttcaacaactgtgatttcaatatggacagcttaatttgtgctgaa
gcaaagcaagagaatatagatgtaaagtctgctgatggtctgatgagcaatccagggaaa
agctattgtgccttcatgacagctggtggagagaatgtgcatgtatctgaaaaagggatt
ttgaaggcaaagagcattctgaatgaaaaccttgataactgcacagactcaaatgccatt
gaggaggcttggttttcagatggtagatttttgttactcactgaagatggtacaggtgtc
aaaggagcaaggaacaaatcaaattattctgacctcaacggagatgaaaagtgctgtgat
ttcagcactgccggtgggaagactgtgcatatgtccgatggagcactccagaaagcaaag
tctattctgaacgaatgtgatgtaattggaaatccacaacctgagaatggccacaacgtg
catctggaaaagattccaacaaaggaaacgcatgaaatctctcatgttagtgcagtcagt
gggaaaggggtgtttatttcagaaaaggctcttcagcatgtgaagtctgtgtacgttctg
ggtgagactggtaatgtaaaacattcagttggcagtaatccagtcggaagccattttggt
tttagcacagccagtggtaaaggactgtctgtttcagagaaggcacttcaagaagcgtgt
gatgatacccttgccagggatactgaccctcacaaaagggctgaagaaaataggccactg
aatgtcccttctccccatattaatgttcagcgtgtgccggtcaaagcagttcgactggag
gaccgcgaagtgatccagaccattgttggaatggaatgtaagtcttcatctgtagaatgt
caagaggagtcttccttgttaaattttgaatcgcttggattcagtggctgctctgtgacc
cagaggaggtactttgcccaggaggccatggattgtaccaaggctcttttagaggacgaa
gacttgaccgatcattgtcctggaacaccaatccaagctaaccccatgtcctgcaagggg
ggttttgagatgagaagtggaattgggaaaaggtcggcagaggatttagggatgacagac
cagcctcctctgaaaagaaaactcttgaccaaattcgacagaactgtggattgtattcga
cagtcaaaactcactccagctaaaagcagttcagatggtatatttaaagacaggagagtc
ttcaaatataatgtgcctcttcaacctaatgtcacgaggccatatcgagctaatcagaga
tgtgtagacacaaggctgaataagcccgagccacagaagacgacgtcagatccaactgcc
gaagaccgtaaaccagttagctccaagaccgctgtatttgtccccccattccggaagaat
gtcaagcttgagccacaggggagcagtggtcttcaggacaagactagagcgcctggtgtg
tttgtttccccgtttcgaaaaaacaaccgcttaaccagggagggttcctttaagccttta
gaagataatcattcccccttcaactctgaaatgcctaccaagaccacatctgttccactt
cctgagtacaactccatcactgacactggtagtgataacgcaaaggactccattaaggaa
caggacccacaaaatattgacaaaacggaccgaggtgatgattgtggccattgccttcct
gtcaccctaggaggagaggatgccactgcagaggagtctattgcaggtcagctagcccct
gatgccaccggtacccttctagatgttgtttatgatgcagagtgcttgcagcttgcccga
gacatgcaggacatgaggatcaggaagaagaagcggcagaccattagacctctccctggc
agcctgtacctggccaagacatctggggtggccaggctgaccctcagggaggctgttgga
ggttggcaccctgtacaacacacacacaaacagctgtatggctatggagtgcaccggcat
gtttgggatatcagcagtgagagtgctgaggcgttccgctttgtttgccgacacttcttc
agacgcgaggcgtttgtagaggggtgcattcagctggccgacgggggttggctcattcct
cgcaacgatggaactgcagggaaacatgagttccacagagcgttgtgtgacagccctggc
gtggaccccaagctgatcagtgaggactgggtgttcaaccactaccgctgggtggtgtgg
aaacgggcctgcatggagagggcattcccagaggtgatgggcagcctctgtctcacacca
gaacaggtgctcctacaactgaaatacaggtacgacttggaggtggacaacagcaagagg
tcagctctacggaagatcatggagagagacgacacggcagtcaagaccctggtgctttgt
gtatgtggtgttgtcaccaaaggccataacccaacaaggcagagctggagtgagaccaag
accaaaaccccacccgggagcgccgcagggtctaaagcgaagtcgtcccctgtaggcttg
atctggctgacggatggctggtacgccatcaaggcccagctggacgtcccactgaccgcc
atgctccaccggggccgcctggcaattgggggaaaggtgctggtccacggggccgagttg
gtgggatctcaggatgcttgctccccactagaggctcccgactccctcatgttgaagatt
ggtgccaacagcaccagagcggcgcgttggtacaccaggctggggttctacagcaaccct
agtccgttcctcctccccctctcctccctctacagcaacggaggccccgtgggctgtgtg
gacattgtggtgctgaggagctaccctacccagtggatggagaagaagttggacggaggg
tttgtgttccgcgcaggccgtgcagaggagagggaggcacggcgtcatggcaacgccaaa
cacagagccatggagatactgttcgccaagatccaggcccagtttgagaaggaggaggat
ggtgccgcctccccgtttcactcagtcacaaaaccttttccgcctactgaacatcaccca
acagtttgcggtaaacccagaggccggagacggaccctgcgtggtcgagacattgagaca
ctgctggacggggaggagctgtacgacgcggtggagaatgacccagtttatttggagggc
cgtctgagtgagcagcaacgggaggcgttgaacagctataggcgttgtgttggtgagagg
aggcaagaggcactgcaggagcggtttcgccaggctctggaaagcacccaggagggcgag
ggcaggagctgtcacaaccgagacgtgacccccatctggaagctcagcgtcgctgactac
agggccaagccgggcagcaatgcagtgtacctgttgaatatctggcgcccctccatggat
ctgcagtccttgctgaaggagggctgtcgatacagggcctaccaactatccacgtcggag
ggcaagaaacgagccggtaatacctccattcagctcaccgccaccaagagaacccagttc
cagaatttacaggcttctgcagggtggttgtctgagattttccaagcccgagaggcggtc
ggctttcgcgttctcctgaaccgggacttaaagccgctctgtggagaggtggatctggta
ggctacgtcatctccatcacagacagacaaggtcactctccagtggtgtatctagtggat
ggctggctggactttgtcaaggtgcgctgctgcagcagtctggtccagcagggcttggag
gaggtggtcaagcctctggctctggtggccctcagtaaccttcagctcagagcccatccc
tcctcccccacccccatccacagcgccatccctggcctatacgctggagatctagtctcg
ttttccaccaaccctaaggagccacatctacaggaggctgctgctcaactcaggaccctt
gtccagggccaggaacacttcttcaggactgcagaggagaggttatctaaattagtccag
gtgtctgtccagtgtcttcctccgctgccatggaaagcagatgtgaaaccagattcaagg
actactatgacatcccagcagtcagttcgaagcgttggccccttcacccctctgaacagc
gtcgtcccccctccacccgccttcttctcagggggggacaacaaagaccccaagagcttg
aaaagaaagaggggcctggactacctgtgtcgcatcccctctccccctccactctgcccc
ttgggcaccatgacatcaccctcgccgtgcgtcaacaagaccttcaacacccctcgcagg
gctgagacccaccggatcctaaagacacctctggcccccactccacagcatgtccacctg
cccctagaggatgagtgggtggaggatgaagagctggtcatgattgacactcaggcctta
cacgatggcatagagagagacacgtga
DBGET
integrated database retrieval system
