KEGG   Oncorhynchus masou masou (cherry salmon): 135514656
Entry
135514656         CDS       T10723                                 
Name
(RefSeq) lissencephaly-1 homolog B
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
omm  Oncorhynchus masou masou (cherry salmon)
Pathway
omm00565  Ether lipid metabolism
omm01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:omm00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    135514656
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:omm03036]
    135514656
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:omm04147]
    135514656
Chromosome and associated proteins [BR:omm03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    135514656
Exosome [BR:omm04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   135514656
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st EIF3I WD40_CDC20-Fz WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR75_1st Beta-prop_EML_2 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP Beta-prop_IFT122_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_DCAF4 Beta-prop_Nup120_160 Beta-prop_Vps41 WDR90_beta-prop_4th Beta-prop_EML LisH Beta-prop_SPT8 LisH_PAC1 WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 Nucleoporin_N Beta-prop_NUP159_NUP214 Pox_A_type_inc Beta-prop_WDR11_2nd ARMC9_LisH KH_GLD-3_2nd DUF2570 SutA-RBD LisH_2 LisH_WDR26
Other DBs
NCBI-GeneID: 135514656
NCBI-ProteinID: XP_064794215
LinkDB
Position
26:3801623..3856337
AA seq 410 aa
MVLSQRQRDELNRAIADYLRSNGYEEAYSTFKKEAELDMNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEITLGGPVAQKRDPKEWIPRPPERYALSGHRSPVTRVIFHPVF
SVMVTSSEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV
RPNQDGSLIASCSNDQTVRVWVATSKECKAELREHEHVVECIAWAPDTAHPTILEATSSE
SKKNGKSGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLVHPGGRFIVSCADDK
TLRIWDYKNKRCMKTLCAHEHFVTSLDMHRTAPYVVTGSVDQTVKVWECR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggtgctgtcacagagacaacgagacgaactaaaccgagctatagcagactacctacgc
tccaatggctatgaggaagcctattccaccttcaagaaagaggctgaattagatatgaat
gaggagttagataagaagtacgctggtcttttggaaaagaaatggacttctgtcatcaga
ttacagaagaaggtgatggagctggagtcgaagttgaatgaggccaaagaggagatcact
ctagggggtccggtggcccagaagagggaccctaaggagtggatcccccgtcccccagag
agatacgccctgagcggccaccgctcccccgtcacacgggtcatcttccatcctgtcttc
tccgtcatggtcacctcctccgaggacgccaccatcaaggtgtgggactatgaggcaggg
gactttgagcggacactgaagggccatacagactctgtccaggacatctcctttgaccag
acgggcaagctgctggcttcctgttctgcagacatgaccatcaagctgtgggacttccag
ggcttcgagtgcatccgcaccatgcacggtcatgaccataacgtgtcgtctgtagccatc
atgcccaacggagaccacatagtctccgcctccagagacaagaccatcaaaatgtgggag
gtggccactgggtattgtgtaaagacatttacaggccacagggagtgggtgaggatggtc
cggcccaaccaggatggttctcttatcgccagctgttccaacgaccagacggtgcgtgtg
tgggtggccacctccaaggagtgtaaggctgagctgcgagagcacgaacacgtggtggag
tgtatcgcctgggcccccgataccgctcaccctaccatcctggaggctaccagctcggag
agtaagaagaatgggaagtctggtccgttccttctctctggctctagagataagaccatc
aagatgtgggacatcagcactggcatgtgccttatgactctggtgggtcatgataactgg
gtgcgtggtgtgttggtgcaccctggaggcaggttcatagtgagctgtgctgatgataag
actctgaggatctgggactacaagaataagcgctgcatgaagaccctgtgtgcccacgaa
cactttgttacctctctggatatgcaccggactgctccatacgtggtaacaggcagtgtt
gatcagacagtcaaagtgtgggagtgtcgctga

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