Oncorhynchus masou masou (cherry salmon): 135514681
Help
Entry
135514681 CDS
T10723
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
135514681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omm03021
]
135514681
03036 Chromosome and associated proteins [BR:
omm03036
]
135514681
Transcription machinery [BR:
omm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
135514681
Coactivators
SAGA/TFTC/STAGA complex
135514681
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
135514681
STAGA complex
135514681
TFTC complex
135514681
SAGA complex
135514681
SLIK complex
135514681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
Bromo_TP
CENP-S
TFIID-31kDa
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
135514681
NCBI-ProteinID:
XP_064794259
LinkDB
All DBs
Position
26:5451404..5488918
Genome browser
AA seq
523 aa
AA seq
DB search
MAEERRPKQCTVVLPTESMKAMAEAIGVGQLQEESCSTLSEEVSYRIKEIAQDALKFMHH
GKRCKLTTSDIDHALKLKNVEPPEQQKTESTEPLKAVKPGQEEEGSIQKGQGATSAEAKG
KKDGLKRLKPRSTHELSVEQQLYYKEITEACVGSCEAKRAEALQSIATDPGLYQMLPRFS
TFISEGVRVNVVQNNLALLIYLMRMVKSLMDNPTLYLEKYLHELIPAVVTCIVSKQLCLR
PDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFTKSWLDDKTQWTTRYGCIAGL
SELGPDVIKTLILPRLTVEGARIKAVSDGPVVSNIDKIGADHVQSLLLKHCASVIAKARP
LPDNVEQYRADYGYLGPMLCSHVVKARAQAALQAQQVNRTTLTITQPRPILTVSQSGIGG
SGGSRTPSMIKVPSSLTLMSTRPGTPTQPSPPATKYIVMATSSGSSSTQQVIFLLSDQHG
RQRYLHAAASGQAGVRRVRRPGGVATPPEVHCGVPPLVLLSGK
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggagcggaggccgaagcagtgcactgtggttctgcccacggagtcaatgaag
gccatggcagaggccataggagtggggcagctacaggaggagagctgttccaccctgagc
gaggaggtcagctacagaataaaggagatcgcccaggacgcattgaagtttatgcaccat
ggaaagagatgtaaactgacgaccagcgacatagatcatgctcttaaactgaagaatgta
gagcccccagagcagcagaagactgaatctacagagcctctcaaagccgtcaagcctggt
caggaggaggagggctccatccagaagggccagggagctacatctgcagaggcaaaagga
aagaaggatggtctgaagaggttgaagccccgcagtactcacgagctctcagtggaacag
cagctctactacaaggagatcacggaggcctgcgtcgggtcctgtgaggccaagagagct
gaggccctacagagtatcgccacagaccccgggctctaccagatgcttcccagattcagc
acttttatttctgaaggggtccgtgtgaacgtggtgcagaacaacctggccctgctcatc
tacctgatgaggatggtcaagtccctcatggacaaccccactctctacctagagaaatat
ctgcatgagttgatcccagcggtggtgacgtgtatagtgagtaagcagctgtgtttgcgg
cctgacgtggacaaccactgggctctgagggactttgctgcccgtctgatggcccagagc
tgtaagaccttcagcaccaccaccaacaacatccagtcgcgcatcactaagaccttcacc
aagagctggttggatgacaagactcagtggacgacacgctacggctgtatcgctggactg
tctgaactaggacctgacgtgatcaagacgttgatcctgcccaggctcactgtagaagga
gctcgtatcaaagctgtgtctgatggacctgttgtctccaacattgataagataggagca
gaccacgtccaaagccttctactgaaacactgtgccagcgttatcgctaaagctcgtccc
ctgcctgacaacgtagagcagtaccgggctgactacggttatctggggcccatgctgtgt
tctcatgtggtcaaggccagggcccaggcagcactacaggcccagcaggtcaacagaacc
acactcactatcacacagcctcggcccatcctaacggtgtctcagagcggaataggggga
tcaggggggtcccgtacccccagcatgatcaaggtacccagctccctcaccctcatgtcc
acccgaccaggcaccccaacacagccatcgcccccggcaaccaagtacatcgtcatggca
accagctcaggatcatcttccacccagcaggttatcttcctcctcagtgaccagcacggt
cgccagcgctacctccacgctgcagcctctggtcaagctggagtccggagggtccggcgg
cctgggggggtcgcgacccctccagaagtacattgtggtgtccctcccctcgtcctcctc
tctggaaagtaa
DBGET
integrated database retrieval system
