Oncorhynchus masou masou (cherry salmon): 135514689
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Entry
135514689 CDS
T10723
Name
(RefSeq) transcription intermediary factor 1-alpha-like isoform X1
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135514689
Protein kinases [BR:
omm01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
135514689
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
135514689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135514689
NCBI-ProteinID:
XP_064794276
LinkDB
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Position
26:complement(5924429..5936051)
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AA seq
1222 aa
AA seq
DB search
MDESPEAAVDNDDLVIIVENEAESLPAEEERAKQLGGSLGLMDTCPVCKLNFHNREPKLL
PCLHSFCNKCLPPPSRNLVNTEQRRDPQLQADSSKPREILNVIRCPVCRQECWEVEVLDN
FFVKDSVEVPSSTVEKTSQVCMSCDDNTEATGFCVECVEFLCVTCIEAHQRVKFTRDHTI
RQKEEMSPEAVGASTQKPVFCDIHKQEPLKLFCETCDRLTCRDCQLLKHKDHNYQFLDDA
YRNHRQHLENMTHQLQEKRKAIEEVSNCINNGLQQVDENRKSVTNEIKKSICNLIMEINR
KGKILVNQLETLTKDHEVGLKKQQEDVSHLTRHLDHVINFTKWATASHSGTALLYCKRLI
LCQIHYLMRANCNASIVPQSSVRFQCRSGFWASNVDLGSLAVERIPGRQPSSMQQGFPPG
HPSQPGPGPRGEGPPGAFPPGSTAHQRGSTLAQLQLQVEKLAQHPNRAGQPPPNHWSWYQ
QGLKLPGPGPGGPPPQRPHQGGSPSQGPPNMVQIQQPGRSYGPPGPQTHPNPRSPTSMLQ
NAGFPPQSLRDLIHNSSFPPKPMDVLQGTSRYSHAPPNTGPISTQASIHQRNMMEAAQLR
RSDPSGSSSLSMPNPRASYAPSLATAFPDRHAQGRQNSPMSKSSSSEANIGSASWKRTEP
HAAAPPSAKRRRRSSPGPIIVIKDEPEDDDEVSFVQSSVGASASLPDSSTGIQPKPQQQS
LPAPMLEPQLEPEPQLEPEAWPGPQLEPEPWPEPEPQLEPEPQLEPEPRLEPEPRVEAEA
RPEPQLEAEAQPEPQLEAEARPEPQLEAEARPEPQLEAEAQPQPQLEAEAQPETQVELEA
DPQPDREKAPGVPEDDPNEDWCAVCQNGGELLCCDRCPKVFHLNCHIPSLRESPSGEWFC
SFCRDLASPEMEYNPDSQGESPAMKEEPGSEKFPPVDKRKCERLLLCIYCNEFSTDFQEP
ASPLSIPEYKELIETPMDLSIVKSRLESKESPRYCSAEEFVKDVRLIFRNCAKYYQADTE
VGGAGLSLEEYFEEQLKLLYQDRSFSGGREEGMIPPVEDEMEDGMEDDGMAPNEGDMPPV
EDDLTPVEEGMHSMEKEGTEEAPVEGGMEEEGIPPIEESMEEEGEETSPVKGNSPPSDAT
EPVDPSTRGASSPNLPSKDAPQPLSSTQDNPPCEEAPQLLSDTPDNPPDTSPADSQDTSP
AAGLAIENEGTTEEVRDEAEEE
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atggatgagagcccagaagctgctgtggacaacgatgaccttgttattattgtggaaaac
gaggcagagagcttgccagctgaagaggagcgggcgaaacagctagggggtagcctcggt
ctcatggacacttgccctgtctgcaagttgaatttccataacagagagccgaaacttctg
ccatgcctccactctttctgcaataagtgtcttccacctccttcaaggaacttagtcaac
actgaacaacggcgcgacccgcaacttcaagcggacagctcgaaaccacgtgagatcctc
aatgtgatccgctgcccagtgtgtcgacaagagtgctgggaggtggaggtgctcgataac
ttctttgtgaaggactctgtggaggttcccagcagcacagtggagaagaccagtcaggtg
tgtatgagttgtgatgacaacacagaggccacagggttctgtgtggagtgtgtggagttc
ctgtgtgtgacatgtattgaggcccatcagcgagtcaagttcaccagggatcataccata
cggcagaaggaagagatgtccccagaggctgttggtgcatccacacagaagccagtgttt
tgtgacatccacaagcaggagcccctcaagctgttctgtgagacctgcgaccgtctcaca
tgcagagactgtcagctgctcaagcacaaagaccacaattaccagttccttgatgatgcc
tacagaaaccacaggcaacacctggaaaacatgacacatcagctacaggagaagaggaaa
gccatagaagaagtgtccaattgcatcaacaatggactccagcaagtcgatgaaaaccgc
aaatctgtcaccaatgagataaagaaatcaatttgcaacttgatcatggagatcaacaga
aagggaaaaatcttggtcaatcaacttgagacactgactaaggaccatgaggtcggactg
aagaaacaacaagaagatgtcagccacctgaccagacatctagatcacgtcatcaacttc
accaagtgggccacagccagtcacagtggcacagctctgctgtactgcaaaagactgatt
ctttgccaaatccattacctaatgagggccaactgtaacgcatccattgtccctcagagc
tcagtccgctttcagtgtcgctccggtttctgggcctcaaatgtcgaccttgggtctttg
gcagtagagagaattcctggtcgtcagcccagttccatgcagcagggcttccctcctggc
catcccagccagcctggccccggccctagaggagagggccctcccggggccttccctcca
ggctccaccgcccaccagcgtgggagcaccctggcccagctccagctgcaggtagagaag
cttgctcagcaccccaacagggctggacagccccctcccaatcattggtcctggtaccag
cagggtctgaagctcccggggccaggtccagggggcccacctccacagaggccccaccag
gggggttctccatcacagggtccccccaacatggtccagatccagcagccaggacgtagt
tacggaccccccggcccccaaacccatcccaaccccaggagccccacctctatgctacaa
aacgcaggcttccctcctcagtctctaagggatctcatccacaactccagcttccctccc
aaaccaatggatgtgctacagggtacctcccgctactctcatgcacctcctaacacagga
cccatcagcactcaagcctctatacaccagcgtaacatgatggaagccgcacaactgagg
aggagtgaccccagtggatcttcatcattatccatgcccaaccccagagctagttatgct
ccgagcctagccactgccttcccagacagacatgcacaaggaagacagaattcccccatg
tccaaatcttcctcctctgaagccaacatagggtctgcttcctggaagcgtacagagcct
catgctgcggctcccccctcagctaagcggaggcgaaggtcgtcccccggaccaatcatc
gtcatcaaggacgaaccggaggacgatgacgaagtcagctttgtgcagtctagtgttgga
gcctcagccagcctgccagacagtagtacaggcatccagcccaagccccagcagcagtct
ctcccagcacccatgttggagccccagctagagccagagccccagctagagccagaggcc
tggccagggccccagctagagccagagccctggccagagccagagccccagctagagcct
gagccccagctagagcctgagccccggctagagccagagccccgggtcgaggcagaggcc
cggccagagccccagctcgaggcagaggcccagccagagccccagctcgaggcagaggcc
cggccagagccccagctcgaggcagaggcccggccagagccccagctcgaggcagaggcc
caacctcagccccagctagaggcagaggcccagccagagacccaggtagagctagaggct
gacccccaaccagaccgagaaaaggccccaggtgtccctgaagacgacccgaatgaagac
tggtgcgccgtgtgtcaaaatgggggagaactgctctgctgtgacagatgtcccaaagtc
ttccatctgaactgtcatataccttcacttagagagtctcccagtggtgagtggttctgt
tcgttctgtcgtgacctggccagtcctgagatggagtataacccagatagccagggagaa
tcaccagccatgaaggaagagccaggatcagagaaattccctccagttgataagaggaaa
tgtgagagactgttgctctgcatctactgcaacgagttcagtacagatttccaggagcct
gcctcacctttgtcaatcccagagtataaggagctgattgagactccaatggacctgtct
atcgtgaagagcaggctggagtctaaggagagcccacgttactgcagtgctgaggagttt
gtcaaggatgtcaggctcatattcaggaactgtgcaaagtattaccaggcagacactgag
gtgggaggtgcaggactgagcctggaggagtactttgaagagcagctcaagctcctctac
caagacaggagcttctctgggggcagagaggagggaatgataccccctgtggaggatgag
atggaagatgggatggaagatgacgggatggctcctaacgaaggggatatgcccccggtc
gaggacgatctaacacctgttgaagaagggatgcattctatggagaaagaaggaacggaa
gaggctcctgtggaaggagggatggaggaagaagggataccccctatagaagagagcatg
gaagaggaaggggaagagacttctccagtgaaaggaaactcaccaccttctgatgctaca
gaaccagtagatccatcaacaaggggtgcatcatcacccaaccttcccagcaaggatgct
cctcaacccctctcctcaacccaagacaaccctccctgcgaggaggccccccaactcctc
tcagataccccagacaaccctcctgacaccagccctgctgactcccaggacaccagccct
gctgcaggcttagccattgaaaatgaggggacgactgaagaagtgcgagacgaagcagaa
gaggaatga
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